BLASTX nr result

ID: Panax21_contig00014551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014551
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...   270   7e-71
emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]   270   7e-71
ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus ...   266   1e-69
emb|CBI33172.3| unnamed protein product [Vitis vinifera]              265   4e-69
ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like...   261   6e-68

>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  270 bits (691), Expect = 7e-71
 Identities = 129/140 (92%), Positives = 134/140 (95%)
 Frame = +1

Query: 1    EDKDDPLSDEQYGYPKAESDKWVSCIRVLDPRTTETTCLLELQDNEAAFSICTVNFHDKE 180
            EDKDDPLSDEQYGYPKAESDKWVSCIR+LDPRT  TTCLLELQDNEAAFSICTVNFHDKE
Sbjct: 838  EDKDDPLSDEQYGYPKAESDKWVSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKE 897

Query: 181  YGTLLAVGTAKGLQFWPKRSFSAGYVHIYRFLKDGRSLELLHKTQVDGVPLALSQFQGRL 360
            YGTLLAVGTAK LQFWPKRSF AGY+HIYRFL+DG+SLELLHKTQV+GVPLAL QFQGRL
Sbjct: 898  YGTLLAVGTAKSLQFWPKRSFDAGYIHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRL 957

Query: 361  LAGIGPVLRLYDLGKRRLLR 420
            LAGIG VLRLYDLGKRRLLR
Sbjct: 958  LAGIGSVLRLYDLGKRRLLR 977


>emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
          Length = 1143

 Score =  270 bits (691), Expect = 7e-71
 Identities = 129/140 (92%), Positives = 134/140 (95%)
 Frame = +1

Query: 1    EDKDDPLSDEQYGYPKAESDKWVSCIRVLDPRTTETTCLLELQDNEAAFSICTVNFHDKE 180
            EDKDDPLSDEQYGYPKAESDKWVSCIR+LDPRT  TTCLLELQDNEAAFSICTVNFHDKE
Sbjct: 797  EDKDDPLSDEQYGYPKAESDKWVSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKE 856

Query: 181  YGTLLAVGTAKGLQFWPKRSFSAGYVHIYRFLKDGRSLELLHKTQVDGVPLALSQFQGRL 360
            YGTLLAVGTAK LQFWPKRSF AGY+HIYRFL+DG+SLELLHKTQV+GVPLAL QFQGRL
Sbjct: 857  YGTLLAVGTAKSLQFWPKRSFDAGYIHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRL 916

Query: 361  LAGIGPVLRLYDLGKRRLLR 420
            LAGIG VLRLYDLGKRRLLR
Sbjct: 917  LAGIGSVLRLYDLGKRRLLR 936


>ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
            gi|223525135|gb|EEF27867.1| spliceosomal protein sap,
            putative [Ricinus communis]
          Length = 1214

 Score =  266 bits (681), Expect = 1e-69
 Identities = 125/140 (89%), Positives = 136/140 (97%)
 Frame = +1

Query: 1    EDKDDPLSDEQYGYPKAESDKWVSCIRVLDPRTTETTCLLELQDNEAAFSICTVNFHDKE 180
            EDKDDPLSDEQYGYPKAE++KWVSCIRVLDPRT  TTCLLELQDNEAAFS+CTVNFHDKE
Sbjct: 838  EDKDDPLSDEQYGYPKAEAEKWVSCIRVLDPRTAATTCLLELQDNEAAFSVCTVNFHDKE 897

Query: 181  YGTLLAVGTAKGLQFWPKRSFSAGYVHIYRFLKDGRSLELLHKTQVDGVPLALSQFQGRL 360
            +GTLLAVGTAKGLQFWPKRS SAG++HIY+F+ DGR+LELLHKTQV+GVPLALSQFQGRL
Sbjct: 898  HGTLLAVGTAKGLQFWPKRSLSAGFIHIYKFVDDGRALELLHKTQVEGVPLALSQFQGRL 957

Query: 361  LAGIGPVLRLYDLGKRRLLR 420
            LAGIGPVLRLYDLGK+RLLR
Sbjct: 958  LAGIGPVLRLYDLGKKRLLR 977


>emb|CBI33172.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score =  265 bits (676), Expect = 4e-69
 Identities = 126/138 (91%), Positives = 132/138 (95%)
 Frame = +1

Query: 7   KDDPLSDEQYGYPKAESDKWVSCIRVLDPRTTETTCLLELQDNEAAFSICTVNFHDKEYG 186
           +DDPLSDEQYGYPKAESDKWVSCIR+LDPRT  TTCLLELQDNEAAFSICTVNFHDKEYG
Sbjct: 560 EDDPLSDEQYGYPKAESDKWVSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYG 619

Query: 187 TLLAVGTAKGLQFWPKRSFSAGYVHIYRFLKDGRSLELLHKTQVDGVPLALSQFQGRLLA 366
           TLLAVGTAK LQFWPKRSF AGY+HIYRFL+DG+SLELLHKTQV+GVPLAL QFQGRLLA
Sbjct: 620 TLLAVGTAKSLQFWPKRSFDAGYIHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLA 679

Query: 367 GIGPVLRLYDLGKRRLLR 420
           GIG VLRLYDLGKRRLLR
Sbjct: 680 GIGSVLRLYDLGKRRLLR 697


>ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
            gi|449513493|ref|XP_004164340.1| PREDICTED: splicing
            factor 3B subunit 3-like [Cucumis sativus]
          Length = 1214

 Score =  261 bits (666), Expect = 6e-68
 Identities = 124/140 (88%), Positives = 134/140 (95%)
 Frame = +1

Query: 1    EDKDDPLSDEQYGYPKAESDKWVSCIRVLDPRTTETTCLLELQDNEAAFSICTVNFHDKE 180
            EDKDDPLSDE YGYPKAES+KWVSCIRVLDPR+  TTCLLELQDNEAAFS+CTVNFHDKE
Sbjct: 838  EDKDDPLSDEHYGYPKAESEKWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKE 897

Query: 181  YGTLLAVGTAKGLQFWPKRSFSAGYVHIYRFLKDGRSLELLHKTQVDGVPLALSQFQGRL 360
            YGTLLAVGTAKGLQF+PKRS  AGY+HIYRFL+DG+SLELLHKTQV+GVPLAL+QFQGRL
Sbjct: 898  YGTLLAVGTAKGLQFFPKRSLVAGYIHIYRFLEDGKSLELLHKTQVEGVPLALAQFQGRL 957

Query: 361  LAGIGPVLRLYDLGKRRLLR 420
            LAG+G VLRLYDLGKRRLLR
Sbjct: 958  LAGLGSVLRLYDLGKRRLLR 977


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