BLASTX nr result

ID: Panax21_contig00014546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014546
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]    67   1e-14
ref|XP_002332456.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-14
ref|XP_003545434.1| PREDICTED: uncharacterized protein LOC100801...    60   4e-13
gb|AAN62347.1|AF506028_14 CTV.20 [Citrus trifoliata]                   67   3e-12
emb|CAN63337.1| hypothetical protein VITISV_033711 [Vitis vinifera]    65   4e-12

>emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]
          Length = 419

 Score = 66.6 bits (161), Expect(2) = 1e-14
 Identities = 34/95 (35%), Positives = 51/95 (53%)
 Frame = -3

Query: 868 YCYYDYIDAWHHVFIHQNESNSHSWFV*FDHKLKSQFPFWFVHWWHRFGSTYDLLPDLLK 689
           Y Y DY++AW+++F  Q  S  HSWF+ F     ++FP WF  WW  FG    + P  ++
Sbjct: 195 YNYIDYMNAWYNMFYLQ--SYQHSWFIQFSRSCNTKFPAWFQKWWTFFGLLDSIFPPEIQ 252

Query: 688 V*FNHFCIHSKPNPKYEGFPSVLLFVSKYKIPGFL 584
             FN +   SK + +    P +L F S+ +IP  L
Sbjct: 253 EKFNFY--KSKTSSQNINQPRLLTFCSRLRIPWIL 285



 Score = 39.3 bits (90), Expect(2) = 1e-14
 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -2

Query: 596 PWILRWQYDIDTPPKVTDPQYIVTPSFDPFPL-LSRRFFIKWWDKFDVNRIVSQVQLEFP 420
           PWIL W    +   K   P         PFPL LSR F IKWWDKF+ + +  Q  L+  
Sbjct: 282 PWILTW----NIIKKQEQPL--------PFPLSLSREFSIKWWDKFNHDFVCQQKVLQLI 329

Query: 419 TT 414
           +T
Sbjct: 330 ST 331


>ref|XP_002332456.1| predicted protein [Populus trichocarpa] gi|222832527|gb|EEE71004.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
 Frame = -3

Query: 868 YCYYDYIDAWHHVFIHQNESNSHSWFV*FDHKLK-SQFPFWFVHWWHRFGSTYDLLPD-- 698
           Y Y+DY  AW + F+ QN+++SHSW   F + +  +  P WF+ WW  +G   D L +  
Sbjct: 101 YTYWDYQQAWFNAFLMQNQNHSHSWLFYFHNTMNTTNLPLWFLQWWDFYGCHVDYLKEHP 160

Query: 697 LLKV*FNHFCIHSKPNPKYEGFPSVLLFVSKYKIP 593
           L++  + HF  + +P P    F S+L+F +K+ +P
Sbjct: 161 LVENGYLHFKNNFQPAPSKRKFSSLLIFCTKFFVP 195



 Score = 33.1 bits (74), Expect(2) = 2e-14
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -2

Query: 596 PWILRWQYDIDTPPKVTDPQYIVTPSFDPFPLLSRRFFIKWWDKF 462
           PW+  W YD +                +  P+L R+F IKWWD F
Sbjct: 195 PWVCSWFYDYNLQ--------------NGHPVLVRKFKIKWWDSF 225


>ref|XP_003545434.1| PREDICTED: uncharacterized protein LOC100801756 [Glycine max]
          Length = 324

 Score = 59.7 bits (143), Expect(2) = 4e-13
 Identities = 28/89 (31%), Positives = 44/89 (49%)
 Frame = -3

Query: 862 YYDYIDAWHHVFIHQNESNSHSWFV*FDHKLKSQFPFWFVHWWHRFGSTYDLLPDLLKV* 683
           + DY+DAW  VF HQ+    HSW + F       FP WF+ WW  FG   ++ P+ ++  
Sbjct: 5   FQDYVDAWIKVFWHQDTRFKHSWLIYFKTNTIYDFPNWFLQWWDFFGPIPEIFPETVQQG 64

Query: 682 FNHFCIHSKPNPKYEGFPSVLLFVSKYKI 596
           F  F    + N +    P+ L + S + +
Sbjct: 65  FAQF--ERQNNLQESRIPTDLKYFSSFAL 91



 Score = 41.2 bits (95), Expect(2) = 4e-13
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 593 WILRWQYDIDTPPKVTDPQYIVTPSFDPFPLLSRRFFIKWWDKFDVNRI-VSQVQLEFPT 417
           WI  WQY            Y  T   + +P L R  F+KWW +FD ++    QV+L F +
Sbjct: 93  WIFSWQY-----------HYSKTEKTNQYPSLQRHAFVKWWSQFDSSKADPEQVKLSFQS 141

Query: 416 TP 411
            P
Sbjct: 142 HP 143


>gb|AAN62347.1|AF506028_14 CTV.20 [Citrus trifoliata]
          Length = 3148

 Score = 67.4 bits (163), Expect(2) = 3e-12
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
 Frame = -3

Query: 868  YCYYDYIDAWHHVFIHQNESNSHSWFV*FDHKLKSQ-FPFWFVHWWHRFGSTYDLLPDLL 692
            Y Y+DY  AW + F  QN   SHSW   F+ K+  Q  P WF  WW+ FGST  +L    
Sbjct: 1661 YSYWDYQQAWFNTFFIQNPKRSHSWLFFFNSKITVQSLPNWFQQWWNYFGSTPQILTPNA 1720

Query: 691  KV*FNHFCIHSKPNPKYEGFPSVLLFVSKYKIP 593
                N F  H  P+   + F   L F + + +P
Sbjct: 1721 THCLNLFKAHYTPSDSEKRFSPFLCFCTNFFLP 1753



 Score = 30.8 bits (68), Expect(2) = 3e-12
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -2

Query: 596  PWILRWQYDIDTPPKVTDPQYIVTPSFDPFPLLSRRFFIKWWDKFD 459
            PW+  W +   T  K                L+ R F +KWW KFD
Sbjct: 1753 PWVWMWNFRYHTQEKQL--------------LIQRTFKVKWWSKFD 1784


>emb|CAN63337.1| hypothetical protein VITISV_033711 [Vitis vinifera]
          Length = 395

 Score = 64.7 bits (156), Expect(2) = 4e-12
 Identities = 34/92 (36%), Positives = 49/92 (53%)
 Frame = -3

Query: 868 YCYYDYIDAWHHVFIHQNESNSHSWFV*FDHKLKSQFPFWFVHWWHRFGSTYDLLPDLLK 689
           Y Y DYIDAW+++F  Q  S  HSWF+ F     ++F  WF  WW  FG    + P  ++
Sbjct: 208 YNYIDYIDAWYNMFYLQ--SYQHSWFIQFSRNXNTKFXAWFKKWWTFFGLLDSIFPPDIQ 265

Query: 688 V*FNHFCIHSKPNPKYEGFPSVLLFVSKYKIP 593
             FN +   SK + +    P +L F S+ +IP
Sbjct: 266 EKFNFY--KSKTSSQNITQPRLLTFCSRLRIP 295



 Score = 32.7 bits (73), Expect(2) = 4e-12
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 596 PWILRWQYDIDTPPKVTDPQYIVTPSFDPFPL-LSRRFFIKWWDKFDVNRIVSQVQLEFP 420
           PWI  W    +   K   P         PFPL LSR F IKW DKF+ + +  Q  L+  
Sbjct: 295 PWIFXW----NIIKKQEQPL--------PFPLSLSREFNIKWXDKFNHDFVCQQKVLQLI 342

Query: 419 TT 414
           +T
Sbjct: 343 ST 344


Top