BLASTX nr result

ID: Panax21_contig00014545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014545
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   309   4e-82
ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223...   290   2e-76
gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]                       290   2e-76
ref|XP_002312511.1| predicted protein [Populus trichocarpa] gi|1...   281   1e-73
ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         278   7e-73

>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera]
           gi|296086502|emb|CBI32091.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  309 bits (792), Expect = 4e-82
 Identities = 154/192 (80%), Positives = 168/192 (87%)
 Frame = -2

Query: 577 AVSCTDLFSDLLCSEDSGNLSGELPECSSDLEFPADIEESIAGFIEEERKYVPGIDYAER 398
           ++S +D FSDLLC EDS  LSG+LPECSSDLE P DIEESIAGFIE+ER +VPG DY  R
Sbjct: 2   SLSYSDRFSDLLCGEDSSILSGDLPECSSDLESPTDIEESIAGFIEDERNFVPGFDYLAR 61

Query: 397 IQSQSLDASAREESVAWILKVQRYYGLQPLTAYLSVNYMDRFLYSHHFPAQTKGWPFQLL 218
            +S SLDASAREESVAWILKVQ Y+G QPLTAYLSVNY+DRFLYS   P QT GWP QLL
Sbjct: 62  FRSHSLDASAREESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSRRLP-QTNGWPLQLL 120

Query: 217 SVACLSLAAKMEEPLVPSLLDLQVEGAKFIFEARTIRRMEFLVLGILDWRLRSITPFSFL 38
           SVACLSLAAKMEEPLVPSLLDLQVEGAKFIFE++TIRRME LVLG+LDWRLRSITPFSF+
Sbjct: 121 SVACLSLAAKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWRLRSITPFSFI 180

Query: 37  SFFAYKLDSQGT 2
            FFAYKLDS G+
Sbjct: 181 GFFAYKLDSSGS 192


>ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223529002|gb|EEF30993.1|
           cyclin d, putative [Ricinus communis]
          Length = 386

 Score =  290 bits (743), Expect = 2e-76
 Identities = 153/239 (64%), Positives = 179/239 (74%), Gaps = 2/239 (0%)
 Frame = -2

Query: 715 KQKEAPSKSSLLPDASIPATPPLTCXXXXXXXXX*EEHDEQSSIMSAVSCTDLFSDLLCS 536
           K  +A + SS L     P +PP             + +++  + + ++SC+D F+DLLCS
Sbjct: 5   KTFKAKTTSSYLFSLPSPVSPP----------PPSKSNEKSPAAIMSLSCSDCFNDLLCS 54

Query: 535 EDSGNL--SGELPECSSDLEFPADIEESIAGFIEEERKYVPGIDYAERIQSQSLDASARE 362
           EDS  +  +G+ PE SSDLE PA   ESIA FIE+ER +VPG DY  R QS+SLDASARE
Sbjct: 55  EDSSEIFSTGDSPEYSSDLESPAGTVESIASFIEDERNFVPGFDYLSRFQSRSLDASARE 114

Query: 361 ESVAWILKVQRYYGLQPLTAYLSVNYMDRFLYSHHFPAQTKGWPFQLLSVACLSLAAKME 182
           +SVAWILKVQ YY  QPLTAYLSVNY+DRFLYS   P Q+KGWP QLLSVACLSLAAKME
Sbjct: 115 DSVAWILKVQTYYRFQPLTAYLSVNYLDRFLYSRSLP-QSKGWPMQLLSVACLSLAAKME 173

Query: 181 EPLVPSLLDLQVEGAKFIFEARTIRRMEFLVLGILDWRLRSITPFSFLSFFAYKLDSQG 5
           EPLVPSLLDLQVEGAK+IFE RTIRRME LVL +LDWRLRS+TPFSF+ FFA KLDS G
Sbjct: 174 EPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLRSVTPFSFIGFFACKLDSSG 232


>gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]
          Length = 315

 Score =  290 bits (742), Expect = 2e-76
 Identities = 141/192 (73%), Positives = 163/192 (84%), Gaps = 1/192 (0%)
 Frame = -2

Query: 577 AVSCTDLFSDLLCSEDSGNLSGE-LPECSSDLEFPADIEESIAGFIEEERKYVPGIDYAE 401
           ++SC+D FSDLLC EDSG LSG+  PECS D E+  D ++SIA FIE+ERK+VPGIDY E
Sbjct: 2   SISCSDCFSDLLCCEDSGILSGDDRPECSYDFEYSGDFDDSIAEFIEQERKFVPGIDYVE 61

Query: 400 RIQSQSLDASAREESVAWILKVQRYYGLQPLTAYLSVNYMDRFLYSHHFPAQTKGWPFQL 221
           R QSQ LDASAREESVAWILKVQR+YG QPLTAYLSVNY+DRF+Y   FP    GWP QL
Sbjct: 62  RFQSQVLDASAREESVAWILKVQRFYGFQPLTAYLSVNYLDRFIYCRGFPV-ANGWPLQL 120

Query: 220 LSVACLSLAAKMEEPLVPSLLDLQVEGAKFIFEARTIRRMEFLVLGILDWRLRSITPFSF 41
           LSVACLSLAAKMEE L+PS+LDLQVEGAK+IFE +TIRRMEFLVL +LDWRLRS+TPFSF
Sbjct: 121 LSVACLSLAAKMEETLIPSILDLQVEGAKYIFEPKTIRRMEFLVLSVLDWRLRSVTPFSF 180

Query: 40  LSFFAYKLDSQG 5
           + FF++K+D  G
Sbjct: 181 IGFFSHKIDPSG 192


>ref|XP_002312511.1| predicted protein [Populus trichocarpa]
           gi|159025697|emb|CAN88849.1| D1-type cyclin [Populus
           trichocarpa] gi|222852331|gb|EEE89878.1| predicted
           protein [Populus trichocarpa]
          Length = 328

 Score =  281 bits (719), Expect = 1e-73
 Identities = 148/192 (77%), Positives = 159/192 (82%), Gaps = 2/192 (1%)
 Frame = -2

Query: 574 VSCTDLFSDLLCSEDSGNL-SGELPECSSDLEFPADIEES-IAGFIEEERKYVPGIDYAE 401
           +S +D  SDLLC EDS ++ SGE PECSSDLE    +EES IAGFIE+ER +VPG DY  
Sbjct: 1   MSYSDCLSDLLCGEDSSDIFSGESPECSSDLESHDFVEESSIAGFIEDERNFVPGYDYFS 60

Query: 400 RIQSQSLDASAREESVAWILKVQRYYGLQPLTAYLSVNYMDRFLYSHHFPAQTKGWPFQL 221
           R QSQSLDASARE+SVAWILKVQ  YG QPLTAYLSVNY+DRFLYS   P QT GWP QL
Sbjct: 61  RFQSQSLDASAREQSVAWILKVQACYGFQPLTAYLSVNYLDRFLYSRRLP-QTDGWPLQL 119

Query: 220 LSVACLSLAAKMEEPLVPSLLDLQVEGAKFIFEARTIRRMEFLVLGILDWRLRSITPFSF 41
           LSVACLSLAAKMEEPLVPSLLDLQVEGAK+IFE RTIRRME LVLG+LDWRLRSITPFSF
Sbjct: 120 LSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSITPFSF 179

Query: 40  LSFFAYKLDSQG 5
             FFA KLD  G
Sbjct: 180 TGFFACKLDPAG 191


>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  278 bits (712), Expect = 7e-73
 Identities = 144/200 (72%), Positives = 159/200 (79%), Gaps = 8/200 (4%)
 Frame = -2

Query: 577 AVSCTDLFSD-----LLCSEDSGNLSGELPECSSDLEFPADIE---ESIAGFIEEERKYV 422
           +VSC++ F D     LLC EDS  +    PECSSDL+ P   E   ESIAGFIE+ER +V
Sbjct: 2   SVSCSNCFPDDDDSFLLCGEDSSGIIDSSPECSSDLDSPPPSEAEAESIAGFIEDERNFV 61

Query: 421 PGIDYAERIQSQSLDASAREESVAWILKVQRYYGLQPLTAYLSVNYMDRFLYSHHFPAQT 242
           PG +Y  R QS+SLDASAREESVAWILKVQ YY  QPLTAYLSVNY+DRFL S   P QT
Sbjct: 62  PGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSRQLP-QT 120

Query: 241 KGWPFQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKFIFEARTIRRMEFLVLGILDWRLR 62
            GWP QLLSVACLSLAAKMEEPLVPSLLDLQVEGAK++FE +TIRRME LVLG+LDWRLR
Sbjct: 121 NGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLR 180

Query: 61  SITPFSFLSFFAYKLDSQGT 2
           S+TPFSFL FFA KLDS GT
Sbjct: 181 SVTPFSFLDFFACKLDSSGT 200


Top