BLASTX nr result

ID: Panax21_contig00014540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014540
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564847.1| uncharacterized protein [Arabidopsis thaliana] ...   122   3e-26
gb|AAM66002.1| unknown [Arabidopsis thaliana]                         122   3e-26
ref|XP_002886832.1| hypothetical protein ARALYDRAFT_475538 [Arab...   120   9e-26
emb|CBI17605.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002276581.1| PREDICTED: UPF0510 protein INM02-like [Vitis...   119   3e-25

>ref|NP_564847.1| uncharacterized protein [Arabidopsis thaliana]
           gi|30697168|ref|NP_849845.1| uncharacterized protein
           [Arabidopsis thaliana] gi|42572005|ref|NP_974093.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|3335335|gb|AAC27137.1| ESTs gb|F14113 and gb|T42122
           come from this region [Arabidopsis thaliana]
           gi|27311649|gb|AAO00790.1| expressed protein
           [Arabidopsis thaliana] gi|30023788|gb|AAP13427.1|
           At1g65270 [Arabidopsis thaliana]
           gi|222423330|dbj|BAH19640.1| AT1G65270 [Arabidopsis
           thaliana] gi|222423443|dbj|BAH19692.1| AT1G65270
           [Arabidopsis thaliana] gi|332196229|gb|AEE34350.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332196230|gb|AEE34351.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332196231|gb|AEE34352.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 292

 Score =  122 bits (306), Expect = 3e-26
 Identities = 65/114 (57%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
 Frame = -2

Query: 339 LLILAICFSLLITKPLAFQFDELLADDEEFGIEGGKSPDLDLIQSSIXXXXXXXXXXXXX 160
           L +L     L+ +  +AFQ DELL DD+EFG+EG K    DL  SS              
Sbjct: 4   LTLLFFLSFLIFSSSIAFQSDELLVDDDEFGLEGAKPRSTDLYTSSSSSPQQQQQTPTIR 63

Query: 159 KRHVD-RDSDSKVQFSLEHSFGDSDFSPAGTFSTRLKTWSHGGQTLMKLRFSRN 1
           +R+ D  D DSKVQF+LEH+FGDSDFSPAGTFS RLKTWSHGG+TL KLRFSRN
Sbjct: 64  RRYSDPTDLDSKVQFTLEHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRN 117


>gb|AAM66002.1| unknown [Arabidopsis thaliana]
          Length = 292

 Score =  122 bits (306), Expect = 3e-26
 Identities = 65/114 (57%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
 Frame = -2

Query: 339 LLILAICFSLLITKPLAFQFDELLADDEEFGIEGGKSPDLDLIQSSIXXXXXXXXXXXXX 160
           L +L     L+ +  +AFQ DELL DD+EFG+EG K    DL  SS              
Sbjct: 4   LTLLFFLSFLIFSSSIAFQSDELLVDDDEFGLEGAKPRSTDLYTSSSSSPQQQQQTPTIR 63

Query: 159 KRHVD-RDSDSKVQFSLEHSFGDSDFSPAGTFSTRLKTWSHGGQTLMKLRFSRN 1
           +R+ D  D DSKVQF+LEH+FGDSDFSPAGTFS RLKTWSHGG+TL KLRFSRN
Sbjct: 64  RRYSDPTDLDSKVQFTLEHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRN 117


>ref|XP_002886832.1| hypothetical protein ARALYDRAFT_475538 [Arabidopsis lyrata subsp.
           lyrata] gi|297332673|gb|EFH63091.1| hypothetical protein
           ARALYDRAFT_475538 [Arabidopsis lyrata subsp. lyrata]
          Length = 292

 Score =  120 bits (302), Expect = 9e-26
 Identities = 65/114 (57%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
 Frame = -2

Query: 339 LLILAICFSLLITKPLAFQFDELLADDEEFGIEGGKSPDLDLIQSSIXXXXXXXXXXXXX 160
           L +L     L+ +  +AFQ DELL DD+EFG+EG K    DL  SS              
Sbjct: 4   LTLLFFLSFLIFSSCIAFQSDELLVDDDEFGLEGAKPRSTDLHTSSSSSPQQQQQTPTIR 63

Query: 159 KRHVD-RDSDSKVQFSLEHSFGDSDFSPAGTFSTRLKTWSHGGQTLMKLRFSRN 1
           +R+ D  D DSKVQF+LEH+FGDSDFSPAGTFS RLKTWSHGG+TL KLRFSRN
Sbjct: 64  RRYSDPTDLDSKVQFTLEHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRN 117


>emb|CBI17605.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/114 (56%), Positives = 73/114 (64%)
 Frame = -2

Query: 342 FLLILAICFSLLITKPLAFQFDELLADDEEFGIEGGKSPDLDLIQSSIXXXXXXXXXXXX 163
           F L   + F+LL+   L FQ DELL DDEEFG+EGG+S +   I+S              
Sbjct: 21  FFLFSCLGFALLVPSSLGFQSDELLLDDEEFGLEGGRSSESFRIRSQPSAPQSARRRSSD 80

Query: 162 XKRHVDRDSDSKVQFSLEHSFGDSDFSPAGTFSTRLKTWSHGGQTLMKLRFSRN 1
                  DSDSK+QFSLEH+FGDSDFSPAG FS RLKT SHG QTL KLRFSRN
Sbjct: 81  FGGGGGSDSDSKIQFSLEHAFGDSDFSPAGAFSARLKTSSHGAQTLTKLRFSRN 134


>ref|XP_002276581.1| PREDICTED: UPF0510 protein INM02-like [Vitis vinifera]
          Length = 322

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/114 (56%), Positives = 73/114 (64%)
 Frame = -2

Query: 342 FLLILAICFSLLITKPLAFQFDELLADDEEFGIEGGKSPDLDLIQSSIXXXXXXXXXXXX 163
           F L   + F+LL+   L FQ DELL DDEEFG+EGG+S +   I+S              
Sbjct: 25  FFLFSCLGFALLVPSSLGFQSDELLLDDEEFGLEGGRSSESFRIRSQPSAPQSARRRSSD 84

Query: 162 XKRHVDRDSDSKVQFSLEHSFGDSDFSPAGTFSTRLKTWSHGGQTLMKLRFSRN 1
                  DSDSK+QFSLEH+FGDSDFSPAG FS RLKT SHG QTL KLRFSRN
Sbjct: 85  FGGGGGSDSDSKIQFSLEHAFGDSDFSPAGAFSARLKTSSHGAQTLTKLRFSRN 138


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