BLASTX nr result

ID: Panax21_contig00014510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014510
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43582.1| unknown [Lotus japonicus]                              454   e-125
ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycin...   452   e-125
ref|XP_002270881.1| PREDICTED: F-box protein SKIP31 [Vitis vinif...   451   e-124
ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycin...   450   e-124
ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|2...   442   e-122

>gb|AFK43582.1| unknown [Lotus japonicus]
          Length = 328

 Score =  454 bits (1168), Expect = e-125
 Identities = 229/355 (64%), Positives = 265/355 (74%)
 Frame = +3

Query: 66   MSVSEDEDERLAQFLESEVLSETSXXXXXXXXXXXXXXXXGPQHKRPCVEDEAHVGEEGN 245
            M++S+DEDE LAQFLESEVLSE S                 P+ KR  +E EA   ++G 
Sbjct: 1    MTLSDDEDENLAQFLESEVLSEVSDKEEENLEE--------PKAKRKRIE-EAESTKQGQ 51

Query: 246  STRSASSIQVQDPSPSRKIRIVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHIL 425
             T+  S+                  S  +  G+NN    P+RI+TG FSK+PPE +HHIL
Sbjct: 52   GTKQISA----------------PLSEPENYGVNNGVV-PKRIETGFFSKIPPEFFHHIL 94

Query: 426  KFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRWGLLQPTNKLRNCAWKKLYIQRDEE 605
            KFLSSEDL++CS VC FL++AASDEALWRRLYCMRWGLL PT KLR C W+ LYIQRD +
Sbjct: 95   KFLSSEDLISCSAVCTFLNYAASDEALWRRLYCMRWGLLPPTRKLRECPWENLYIQRDGD 154

Query: 606  DMVEFVRNCPSEFKEYYIQMQTAKRSQAPLPSQVNDDWMILDKTVADQVSIWKRSKGLAD 785
            DMVE VRNC +EFKEYYIQMQ AKRSQAP PSQ+NDD +ILDKT+ADQVS WK S+GL+D
Sbjct: 155  DMVELVRNCQNEFKEYYIQMQAAKRSQAPNPSQLNDDRIILDKTLADQVSSWKSSRGLSD 214

Query: 786  KVVTDHSCSGETCSYYQIGDVFVCEKTGNVHVCDDTCKEVILDPTNELLVCTISGHCFDR 965
             VVTDH+CSGETCSYY IGDVF+CEKTG VHVCD+TC+EV++DPTNELLVCTISGHCFDR
Sbjct: 215  TVVTDHACSGETCSYYAIGDVFICEKTGQVHVCDETCREVVMDPTNELLVCTISGHCFDR 274

Query: 966  LLSPXXXXXXXXXXXXGGVSDEAEPFMGSGRFARAYLLGYNCSDEKELEACLKFC 1130
            LLSP            GG +DEAEPFMGSGRFARAYLLGYNC+DEKELEA L+FC
Sbjct: 275  LLSP-AEMEPDAEQQQGGAADEAEPFMGSGRFARAYLLGYNCADEKELEATLRFC 328


>ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 324

 Score =  452 bits (1164), Expect = e-125
 Identities = 232/355 (65%), Positives = 263/355 (74%)
 Frame = +3

Query: 66   MSVSEDEDERLAQFLESEVLSETSXXXXXXXXXXXXXXXXGPQHKRPCVEDEAHVGEEGN 245
            M++S+DEDE LAQFLESEVLSE S                 P+ KR  +E++        
Sbjct: 1    MTLSDDEDENLAQFLESEVLSEVSDKEEENVEE--------PKAKRARLEED-------- 44

Query: 246  STRSASSIQVQDPSPSRKIRIVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHIL 425
                   I  Q  S        S S S     + NN   PRRI+TG FS++PPEL+HHIL
Sbjct: 45   ------EITKQKQS--------SDSLSAPKNIVVNNGVVPRRIETGYFSQIPPELFHHIL 90

Query: 426  KFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRWGLLQPTNKLRNCAWKKLYIQRDEE 605
            KFLSSEDLV+CSLVCRFL++AASDEALWRRLYCMRWG+L PT KLR C WK LYIQRD E
Sbjct: 91   KFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGMLPPTRKLRECPWKMLYIQRDGE 150

Query: 606  DMVEFVRNCPSEFKEYYIQMQTAKRSQAPLPSQVNDDWMILDKTVADQVSIWKRSKGLAD 785
            DMVE VR+C +EFKEYYIQMQ AKRSQAP PSQ+ DD +ILDKT+ADQVS WK S+GL+D
Sbjct: 151  DMVELVRSCQNEFKEYYIQMQAAKRSQAPHPSQLKDDRIILDKTLADQVSSWKSSRGLSD 210

Query: 786  KVVTDHSCSGETCSYYQIGDVFVCEKTGNVHVCDDTCKEVILDPTNELLVCTISGHCFDR 965
             VVTDH+CSGETCSYY IGDVF+CEKTG VHVCDDTC+EV++DPTNELLVCTISGHCFDR
Sbjct: 211  TVVTDHACSGETCSYYHIGDVFICEKTGQVHVCDDTCREVVMDPTNELLVCTISGHCFDR 270

Query: 966  LLSPXXXXXXXXXXXXGGVSDEAEPFMGSGRFARAYLLGYNCSDEKELEACLKFC 1130
            LLSP            GGV+DEAEPFMGSGRFARAY LGYNC+DEKELEA L+FC
Sbjct: 271  LLSP-SEMEPDTEQQQGGVTDEAEPFMGSGRFARAYSLGYNCADEKELEATLRFC 324


>ref|XP_002270881.1| PREDICTED: F-box protein SKIP31 [Vitis vinifera]
            gi|296085460|emb|CBI29192.3| unnamed protein product
            [Vitis vinifera]
          Length = 305

 Score =  451 bits (1160), Expect = e-124
 Identities = 234/355 (65%), Positives = 257/355 (72%)
 Frame = +3

Query: 66   MSVSEDEDERLAQFLESEVLSETSXXXXXXXXXXXXXXXXGPQHKRPCVEDEAHVGEEGN 245
            M+VSEDEDE LA FLESEVLSE S                 PQ KR  V++E        
Sbjct: 1    MTVSEDEDENLAHFLESEVLSEASDQEKDAVAEQ-------PQAKRLRVDEEG------- 46

Query: 246  STRSASSIQVQDPSPSRKIRIVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHIL 425
            S RSA                                  P+RI+TGIFSK+PPEL+HHIL
Sbjct: 47   SKRSA----------------------------------PKRIETGIFSKIPPELFHHIL 72

Query: 426  KFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRWGLLQPTNKLRNCAWKKLYIQRDEE 605
            KFLSSEDLVACSLVCRFL+ AASDE+LWRRLYCMRWGLLQPT K R CAWKKLYI+RDEE
Sbjct: 73   KFLSSEDLVACSLVCRFLNCAASDESLWRRLYCMRWGLLQPTKKFRQCAWKKLYIERDEE 132

Query: 606  DMVEFVRNCPSEFKEYYIQMQTAKRSQAPLPSQVNDDWMILDKTVADQVSIWKRSKGLAD 785
            DM+EFVRNCPSEFKEYYIQMQ AKRSQAPL SQVNDD +ILDKTVADQVS WK S+GL D
Sbjct: 133  DMIEFVRNCPSEFKEYYIQMQVAKRSQAPLLSQVNDDRIILDKTVADQVSSWKSSRGLTD 192

Query: 786  KVVTDHSCSGETCSYYQIGDVFVCEKTGNVHVCDDTCKEVILDPTNELLVCTISGHCFDR 965
            KV  DH+CSG TC+YYQIGDVFVCEKTG VHVCDDTC+EV+ D  N+++VCTISGHCFDR
Sbjct: 193  KVDIDHNCSGVTCTYYQIGDVFVCEKTGRVHVCDDTCREVVTDTANDIVVCTISGHCFDR 252

Query: 966  LLSPXXXXXXXXXXXXGGVSDEAEPFMGSGRFARAYLLGYNCSDEKELEACLKFC 1130
            LL              GGV+DEAEPFMGSGRFARAYLLGYNC+DEKELEA L+FC
Sbjct: 253  LL--VSDEEPDIEQQQGGVTDEAEPFMGSGRFARAYLLGYNCADEKELEAALRFC 305


>ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 325

 Score =  450 bits (1158), Expect = e-124
 Identities = 230/355 (64%), Positives = 262/355 (73%)
 Frame = +3

Query: 66   MSVSEDEDERLAQFLESEVLSETSXXXXXXXXXXXXXXXXGPQHKRPCVEDEAHVGEEGN 245
            M++S+DEDE LAQFLESEVLSE S                 P+ KR  V       EE  
Sbjct: 1    MTLSDDEDENLAQFLESEVLSEVSDKEEENVEE--------PKAKRKRV-------EEDE 45

Query: 246  STRSASSIQVQDPSPSRKIRIVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHIL 425
             T+   S               S SSS     + +N    RRI+TG FS++PPEL++HIL
Sbjct: 46   ITKQKQS---------------SDSSSAPKNIVVSNGVVLRRIETGYFSQIPPELFNHIL 90

Query: 426  KFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRWGLLQPTNKLRNCAWKKLYIQRDEE 605
            KFLSSEDLV+CSLVCRFL++AASDEALWRRLYCMRWG+L PT KLR C WKKLYIQRD E
Sbjct: 91   KFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGILPPTRKLRECPWKKLYIQRDGE 150

Query: 606  DMVEFVRNCPSEFKEYYIQMQTAKRSQAPLPSQVNDDWMILDKTVADQVSIWKRSKGLAD 785
            DMVE VR+C +EFKEYYIQMQ AKRSQAP PSQ+ DD +ILDKT+ADQVS WK S+GL+D
Sbjct: 151  DMVELVRSCQNEFKEYYIQMQAAKRSQAPHPSQLKDDRIILDKTLADQVSSWKSSRGLSD 210

Query: 786  KVVTDHSCSGETCSYYQIGDVFVCEKTGNVHVCDDTCKEVILDPTNELLVCTISGHCFDR 965
             VVTDH+CSGETCSYY IGDVF+CEKTG VHVCDDTC+E+++DPTN LLVCTISGHC DR
Sbjct: 211  TVVTDHACSGETCSYYHIGDVFICEKTGQVHVCDDTCRELVMDPTNGLLVCTISGHCLDR 270

Query: 966  LLSPXXXXXXXXXXXXGGVSDEAEPFMGSGRFARAYLLGYNCSDEKELEACLKFC 1130
            LLSP            GGV+DEAEPFMGSGRFARAYLLGYNC+DEKELEA L+FC
Sbjct: 271  LLSPSEEMEPDTEQQQGGVADEAEPFMGSGRFARAYLLGYNCADEKELEATLRFC 325


>ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|222839148|gb|EEE77499.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  442 bits (1138), Expect = e-122
 Identities = 220/355 (61%), Positives = 255/355 (71%)
 Frame = +3

Query: 66   MSVSEDEDERLAQFLESEVLSETSXXXXXXXXXXXXXXXXGPQHKRPCVEDEAHVGEEGN 245
            M++S++EDE LA+FLESEVLSE S                         E+E    ++  
Sbjct: 1    MTISDEEDEILAKFLESEVLSEVSDQDQE--------------------EEETEEAKKEE 40

Query: 246  STRSASSIQVQDPSPSRKIRIVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHIL 425
                   ++ Q+     K      +        NNN+   RRI +G+ SK+PPEL+ HIL
Sbjct: 41   DEPKFKRVRFQETQEEEK----EQNQKKKANNNNNNKGEQRRIKSGVLSKIPPELFPHIL 96

Query: 426  KFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRWGLLQPTNKLRNCAWKKLYIQRDEE 605
            KFLSSEDL+ACSLVCRFL+FAASDE+LWRRLYCMRWG L P  KL   AWKKLYIQRDEE
Sbjct: 97   KFLSSEDLIACSLVCRFLNFAASDESLWRRLYCMRWGFLPPATKLCENAWKKLYIQRDEE 156

Query: 606  DMVEFVRNCPSEFKEYYIQMQTAKRSQAPLPSQVNDDWMILDKTVADQVSIWKRSKGLAD 785
            DMV+ VRNCP EFKEYY+QM  AKRSQ PLPSQV DD +ILDKT+ADQVS WK  +GL D
Sbjct: 157  DMVKLVRNCPPEFKEYYVQMNAAKRSQTPLPSQVKDDRIILDKTIADQVSTWKSRRGLTD 216

Query: 786  KVVTDHSCSGETCSYYQIGDVFVCEKTGNVHVCDDTCKEVILDPTNELLVCTISGHCFDR 965
            KVVTDH+CSGETCSY+++GDVFVCEKTGNVHVCDDTC+EVI+DPTNELLVCTISGHCFDR
Sbjct: 217  KVVTDHACSGETCSYFKLGDVFVCEKTGNVHVCDDTCREVIMDPTNELLVCTISGHCFDR 276

Query: 966  LLSPXXXXXXXXXXXXGGVSDEAEPFMGSGRFARAYLLGYNCSDEKELEACLKFC 1130
             L P            GG++DEAEPFMGSGRFARAYLLGYNC D+KELEA L+FC
Sbjct: 277  WLLP-SEMEPDPDQQQGGLTDEAEPFMGSGRFARAYLLGYNCDDDKELEAALRFC 330


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