BLASTX nr result

ID: Panax21_contig00014502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014502
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251...   239   2e-61
emb|CBI25319.3| unnamed protein product [Vitis vinifera]              239   2e-61
ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258...   230   8e-59
emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]   228   3e-58
ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing fac...   226   1e-57

>ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
          Length = 304

 Score =  239 bits (609), Expect = 2e-61
 Identities = 104/117 (88%), Positives = 112/117 (95%)
 Frame = -1

Query: 353 NRFRRVRDVDMKHDFAFVEFSDPRDADDARYSLNGREFDGNRLVVEFAKGVPRGPGGSRE 174
           +R+ RVRDVDMKHDFAFVEFSDPRDADDARYSLNGR+FDG+R++VEFAKG PRGPGGSRE
Sbjct: 32  SRYGRVRDVDMKHDFAFVEFSDPRDADDARYSLNGRDFDGSRIIVEFAKGGPRGPGGSRE 91

Query: 173 YLGRGPLPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIEKNCHNSPKKLSR 3
           YLGRGP PGSGRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIE+NC NSPKKL R
Sbjct: 92  YLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLKR 148


>emb|CBI25319.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score =  239 bits (609), Expect = 2e-61
 Identities = 104/117 (88%), Positives = 112/117 (95%)
 Frame = -1

Query: 353 NRFRRVRDVDMKHDFAFVEFSDPRDADDARYSLNGREFDGNRLVVEFAKGVPRGPGGSRE 174
           +R+ RVRDVDMKHDFAFVEFSDPRDADDARYSLNGR+FDG+R++VEFAKG PRGPGGSRE
Sbjct: 64  SRYGRVRDVDMKHDFAFVEFSDPRDADDARYSLNGRDFDGSRIIVEFAKGGPRGPGGSRE 123

Query: 173 YLGRGPLPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIEKNCHNSPKKLSR 3
           YLGRGP PGSGRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIE+NC NSPKKL R
Sbjct: 124 YLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLKR 180


>ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
          Length = 307

 Score =  230 bits (587), Expect = 8e-59
 Identities = 102/118 (86%), Positives = 112/118 (94%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 NRFRRVRDVDMKHDFAFVEFSDPRDADDARYSLNGREFDGNRLVVEFAKGVPRG-PGGSR 177
           +R+ RVRDVDMKHDFAFVEFSDPRDADDARY+LNGR+FDG+R++VEFAKG PRG  GGSR
Sbjct: 32  SRYGRVRDVDMKHDFAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKGGPRGGSGGSR 91

Query: 176 EYLGRGPLPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIEKNCHNSPKKLSR 3
           EYLGRGP PGSGRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIE+NC NSP+KLSR
Sbjct: 92  EYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRKLSR 149


>emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
          Length = 306

 Score =  228 bits (582), Expect = 3e-58
 Identities = 101/117 (86%), Positives = 111/117 (94%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 NRFRRVRDVDMKHDFAFVEFSDPRDADDARYSLNGREFDGNRLVVEFAKGVPRG-PGGSR 177
           +R+ RVRDVDMKHDFAFVEFSDPRDADDARY+LNGR+FDG+R++VEFAKG PRG  GGSR
Sbjct: 32  SRYGRVRDVDMKHDFAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKGGPRGGSGGSR 91

Query: 176 EYLGRGPLPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIEKNCHNSPKKLS 6
           EYLGRGP PGSGRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIE+NC NSP+KLS
Sbjct: 92  EYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRKLS 148


>ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
           1 [Cucumis sativus] gi|449451691|ref|XP_004143595.1|
           PREDICTED: serine/arginine-rich splicing factor
           RS2Z32-like isoform 2 [Cucumis sativus]
           gi|449507559|ref|XP_004163066.1| PREDICTED:
           serine/arginine-rich splicing factor RS2Z32-like isoform
           1 [Cucumis sativus] gi|449507562|ref|XP_004163067.1|
           PREDICTED: serine/arginine-rich splicing factor
           RS2Z32-like isoform 2 [Cucumis sativus]
          Length = 309

 Score =  226 bits (576), Expect = 1e-57
 Identities = 100/117 (85%), Positives = 109/117 (93%)
 Frame = -1

Query: 353 NRFRRVRDVDMKHDFAFVEFSDPRDADDARYSLNGREFDGNRLVVEFAKGVPRGPGGSRE 174
           +R+ RVRDVDMK D+AFVEFSDPRDADDARYSLNGR+  G+R++VE AKGVPRGPGGSRE
Sbjct: 32  SRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE 91

Query: 173 YLGRGPLPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIEKNCHNSPKKLSR 3
           YLGRGP PG+GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIEKNC NSPKKL R
Sbjct: 92  YLGRGP-PGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR 147


Top