BLASTX nr result

ID: Panax21_contig00014487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014487
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304405.1| condensin complex components subunit [Populu...   228   5e-58
emb|CBI24628.3| unnamed protein product [Vitis vinifera]              226   1e-57
ref|XP_002269854.1| PREDICTED: structural maintenance of chromos...   226   1e-57
emb|CAN68529.1| hypothetical protein VITISV_032933 [Vitis vinifera]   226   1e-57
ref|XP_002326795.1| condensin complex components subunit [Populu...   225   3e-57

>ref|XP_002304405.1| condensin complex components subunit [Populus trichocarpa]
           gi|222841837|gb|EEE79384.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1176

 Score =  228 bits (580), Expect = 5e-58
 Identities = 119/151 (78%), Positives = 131/151 (86%)
 Frame = +3

Query: 3   SKQEEAVAVEKELSLRTKDVENVKRVLESLSFEEGQMEALQKDRMAESEMVQKLKDEIRM 182
           SK EEAVAVE ELS R KDVEN K  LESLS++EGQMEALQKD  +E +++QKLKDEIR 
Sbjct: 437 SKNEEAVAVENELSARRKDVENAKSALESLSYKEGQMEALQKDCASELKLLQKLKDEIRD 496

Query: 183 LSSRLGNVDFQYRDPVRNFDRSKVKGVVAKLIKVKDSSTMTALEVAAGGKLFNIVVDTEN 362
           LS++L NV F YRDPVRNFDRSKVKGVVAKLIKV DSSTMTALEV AGGKLFN+VVDTE+
Sbjct: 497 LSAQLSNVQFIYRDPVRNFDRSKVKGVVAKLIKVNDSSTMTALEVTAGGKLFNVVVDTES 556

Query: 363 TGKQILQNGELRRRVTIIPLNKIQGHLVSSR 455
           TGKQ+LQNG+LRRRVTIIPLNKIQ H V  R
Sbjct: 557 TGKQLLQNGDLRRRVTIIPLNKIQSHTVPIR 587


>emb|CBI24628.3| unnamed protein product [Vitis vinifera]
          Length = 1171

 Score =  226 bits (577), Expect = 1e-57
 Identities = 115/151 (76%), Positives = 133/151 (88%)
 Frame = +3

Query: 3   SKQEEAVAVEKELSLRTKDVENVKRVLESLSFEEGQMEALQKDRMAESEMVQKLKDEIRM 182
           SK EEAV+VE EL++R KDVEN+K  LESL+++EGQMEALQK+R  E  MVQ+LKDE R+
Sbjct: 392 SKHEEAVSVENELNVRRKDVENIKMALESLTYKEGQMEALQKERALELGMVQELKDETRI 451

Query: 183 LSSRLGNVDFQYRDPVRNFDRSKVKGVVAKLIKVKDSSTMTALEVAAGGKLFNIVVDTEN 362
           LS++LGNV F Y DP++NFDRS+VKGVVAKLIKVKDSSTMTALEVAAGGKLFN+VVDTEN
Sbjct: 452 LSAQLGNVQFTYHDPLKNFDRSRVKGVVAKLIKVKDSSTMTALEVAAGGKLFNVVVDTEN 511

Query: 363 TGKQILQNGELRRRVTIIPLNKIQGHLVSSR 455
           TGK +LQNG+LRRRVTIIPLNKIQ H V  R
Sbjct: 512 TGKLLLQNGDLRRRVTIIPLNKIQSHTVPLR 542


>ref|XP_002269854.1| PREDICTED: structural maintenance of chromosomes protein 2-1 [Vitis
           vinifera]
          Length = 1176

 Score =  226 bits (577), Expect = 1e-57
 Identities = 115/151 (76%), Positives = 133/151 (88%)
 Frame = +3

Query: 3   SKQEEAVAVEKELSLRTKDVENVKRVLESLSFEEGQMEALQKDRMAESEMVQKLKDEIRM 182
           SK EEAV+VE EL++R KDVEN+K  LESL+++EGQMEALQK+R  E  MVQ+LKDE R+
Sbjct: 437 SKHEEAVSVENELNVRRKDVENIKMALESLTYKEGQMEALQKERALELGMVQELKDETRI 496

Query: 183 LSSRLGNVDFQYRDPVRNFDRSKVKGVVAKLIKVKDSSTMTALEVAAGGKLFNIVVDTEN 362
           LS++LGNV F Y DP++NFDRS+VKGVVAKLIKVKDSSTMTALEVAAGGKLFN+VVDTEN
Sbjct: 497 LSAQLGNVQFTYHDPLKNFDRSRVKGVVAKLIKVKDSSTMTALEVAAGGKLFNVVVDTEN 556

Query: 363 TGKQILQNGELRRRVTIIPLNKIQGHLVSSR 455
           TGK +LQNG+LRRRVTIIPLNKIQ H V  R
Sbjct: 557 TGKLLLQNGDLRRRVTIIPLNKIQSHTVPLR 587


>emb|CAN68529.1| hypothetical protein VITISV_032933 [Vitis vinifera]
          Length = 1137

 Score =  226 bits (577), Expect = 1e-57
 Identities = 115/151 (76%), Positives = 133/151 (88%)
 Frame = +3

Query: 3   SKQEEAVAVEKELSLRTKDVENVKRVLESLSFEEGQMEALQKDRMAESEMVQKLKDEIRM 182
           SK EEAV+VE EL++R KDVEN+K  LESL+++EGQMEALQK+R  E  MVQ+LKDE R+
Sbjct: 437 SKHEEAVSVENELNVRRKDVENIKMALESLTYKEGQMEALQKERALELGMVQELKDETRI 496

Query: 183 LSSRLGNVDFQYRDPVRNFDRSKVKGVVAKLIKVKDSSTMTALEVAAGGKLFNIVVDTEN 362
           LS++LGNV F Y DP++NFDRS+VKGVVAKLIKVKDSSTMTALEVAAGGKLFN+VVDTEN
Sbjct: 497 LSAQLGNVQFTYHDPLKNFDRSRVKGVVAKLIKVKDSSTMTALEVAAGGKLFNVVVDTEN 556

Query: 363 TGKQILQNGELRRRVTIIPLNKIQGHLVSSR 455
           TGK +LQNG+LRRRVTIIPLNKIQ H V  R
Sbjct: 557 TGKLLLQNGDLRRRVTIIPLNKIQSHTVPLR 587


>ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa]
           gi|222834117|gb|EEE72594.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1176

 Score =  225 bits (574), Expect = 3e-57
 Identities = 115/151 (76%), Positives = 130/151 (86%)
 Frame = +3

Query: 3   SKQEEAVAVEKELSLRTKDVENVKRVLESLSFEEGQMEALQKDRMAESEMVQKLKDEIRM 182
           SK EEA AV+ ELS R KDVEN K  +ESL ++EGQMEALQKDR +E E+VQKLKDEIR 
Sbjct: 437 SKCEEAAAVQNELSARRKDVENAKSAMESLPYKEGQMEALQKDRASELELVQKLKDEIRD 496

Query: 183 LSSRLGNVDFQYRDPVRNFDRSKVKGVVAKLIKVKDSSTMTALEVAAGGKLFNIVVDTEN 362
           LS++L N+ F YRDPVRNFDRSKVKGVVAKLIKVKD STMTALEV AGGKL+N+VVDTE+
Sbjct: 497 LSAQLSNLQFTYRDPVRNFDRSKVKGVVAKLIKVKDRSTMTALEVTAGGKLYNVVVDTES 556

Query: 363 TGKQILQNGELRRRVTIIPLNKIQGHLVSSR 455
           TGKQ+LQNG+LRRRVTI+PLNKIQ H V  R
Sbjct: 557 TGKQLLQNGDLRRRVTIVPLNKIQSHTVHPR 587


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