BLASTX nr result

ID: Panax21_contig00014483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014483
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19710.3| unnamed protein product [Vitis vinifera]              334   1e-89
ref|XP_002281331.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE ...   334   1e-89
ref|XP_002510403.1| pentatricopeptide repeat-containing protein,...   330   2e-88
ref|XP_002306873.1| predicted protein [Populus trichocarpa] gi|2...   305   6e-81
ref|XP_004167043.1| PREDICTED: LOW QUALITY PROTEIN: protein NUCL...   278   6e-73

>emb|CBI19710.3| unnamed protein product [Vitis vinifera]
          Length = 747

 Score =  334 bits (857), Expect = 1e-89
 Identities = 168/244 (68%), Positives = 197/244 (80%)
 Frame = +3

Query: 3   GKLSEVYTECDKETVNGMLLIIVGKVVSEMEMGGLEQRLGAAAVTPSDDFSEDLWKTVWE 182
           GKL EVYT CDK+T++GMLLIIV KVVSEME GGLEQ L AA   PS DFSEDLWKTVWE
Sbjct: 110 GKLMEVYTGCDKQTIDGMLLIIVRKVVSEMEKGGLEQMLSAAVAAPSQDFSEDLWKTVWE 169

Query: 183 VSNMVLEDXXXXXXXXXXXTFLQDDEVKEMYKFAGEAGIRGDMLRELRFKWAREKLEEAE 362
           VSN+VL+D            FLQ +EVKEM +FAGE GIRGDMLRELRFKWAREK+EE+E
Sbjct: 170 VSNLVLDDMKKARNKEKMKGFLQSEEVKEMSRFAGEIGIRGDMLRELRFKWAREKMEESE 229

Query: 363 FYQGLERLREEDARLQEAEKSETVNEETVESDLVMAEEMKPKVISLPKRHGKIKYKIYGL 542
           FYQ L+ LREE A+ +E E++   NEE +  DLV  +E K KV+SLPKRHGKI+Y+IYGL
Sbjct: 230 FYQSLDHLREE-AQAEEGEEA-VGNEEVIGDDLV-EDEKKEKVVSLPKRHGKIRYEIYGL 286

Query: 543 DLSDPKWVEVADKIHKSGEIIWPQEAKPISGKCKLVTEKILSLQEDDNVSPLLAEWMELL 722
           DLSDPKW EVADK+H+  EIIWPQE KPISGKCKL+TEKIL+++E+D+ SPLL EW ELL
Sbjct: 287 DLSDPKWTEVADKVHEREEIIWPQEPKPISGKCKLITEKILNMKEEDDPSPLLDEWAELL 346

Query: 723 KPNR 734
           +P+R
Sbjct: 347 QPSR 350


>ref|XP_002281331.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
           [Vitis vinifera]
          Length = 720

 Score =  334 bits (857), Expect = 1e-89
 Identities = 168/244 (68%), Positives = 197/244 (80%)
 Frame = +3

Query: 3   GKLSEVYTECDKETVNGMLLIIVGKVVSEMEMGGLEQRLGAAAVTPSDDFSEDLWKTVWE 182
           GKL EVYT CDK+T++GMLLIIV KVVSEME GGLEQ L AA   PS DFSEDLWKTVWE
Sbjct: 110 GKLMEVYTGCDKQTIDGMLLIIVRKVVSEMEKGGLEQMLSAAVAAPSQDFSEDLWKTVWE 169

Query: 183 VSNMVLEDXXXXXXXXXXXTFLQDDEVKEMYKFAGEAGIRGDMLRELRFKWAREKLEEAE 362
           VSN+VL+D            FLQ +EVKEM +FAGE GIRGDMLRELRFKWAREK+EE+E
Sbjct: 170 VSNLVLDDMKKARNKEKMKGFLQSEEVKEMSRFAGEIGIRGDMLRELRFKWAREKMEESE 229

Query: 363 FYQGLERLREEDARLQEAEKSETVNEETVESDLVMAEEMKPKVISLPKRHGKIKYKIYGL 542
           FYQ L+ LREE A+ +E E++   NEE +  DLV  +E K KV+SLPKRHGKI+Y+IYGL
Sbjct: 230 FYQSLDHLREE-AQAEEGEEA-VGNEEVIGDDLV-EDEKKEKVVSLPKRHGKIRYEIYGL 286

Query: 543 DLSDPKWVEVADKIHKSGEIIWPQEAKPISGKCKLVTEKILSLQEDDNVSPLLAEWMELL 722
           DLSDPKW EVADK+H+  EIIWPQE KPISGKCKL+TEKIL+++E+D+ SPLL EW ELL
Sbjct: 287 DLSDPKWTEVADKVHEREEIIWPQEPKPISGKCKLITEKILNMKEEDDPSPLLDEWAELL 346

Query: 723 KPNR 734
           +P+R
Sbjct: 347 QPSR 350


>ref|XP_002510403.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551104|gb|EEF52590.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  330 bits (846), Expect = 2e-88
 Identities = 167/244 (68%), Positives = 195/244 (79%)
 Frame = +3

Query: 3   GKLSEVYTECDKETVNGMLLIIVGKVVSEMEMGGLEQRLGAAAVTPSDDFSEDLWKTVWE 182
           GKLS+VY +CDK+T++ MLLIIVGKVVSEME G  EQ LGA+   PS D SEDLW+TVWE
Sbjct: 108 GKLSDVYQDCDKQTIDSMLLIIVGKVVSEMEKGSPEQMLGASGAAPSQDLSEDLWRTVWE 167

Query: 183 VSNMVLEDXXXXXXXXXXXTFLQDDEVKEMYKFAGEAGIRGDMLRELRFKWAREKLEEAE 362
           VSN+VLED            FLQ +EVKEM +FAGE GIRGDMLRELRFKWA EK+EE+E
Sbjct: 168 VSNLVLEDMEKERKKEKMKGFLQSEEVKEMCRFAGEIGIRGDMLRELRFKWAHEKMEESE 227

Query: 363 FYQGLERLREEDARLQEAEKSETVNEETVESDLVMAEEMKPKVISLPKRHGKIKYKIYGL 542
           FY  LE+LREE+ R QE E+++  N E +  + VM EE K KV S+PKRHGKI+YKIYGL
Sbjct: 228 FYASLEKLREEE-RTQEKEEADAKNYEPMGEEAVMGEE-KLKVKSIPKRHGKIRYKIYGL 285

Query: 543 DLSDPKWVEVADKIHKSGEIIWPQEAKPISGKCKLVTEKILSLQEDDNVSPLLAEWMELL 722
           DLSDPKWVEVADKIH++G IIWPQE KPI+GK KLVTEKILSL+E+D+ S LLAEW ELL
Sbjct: 286 DLSDPKWVEVADKIHETGAIIWPQEPKPINGKSKLVTEKILSLKEEDDPSQLLAEWAELL 345

Query: 723 KPNR 734
           +PNR
Sbjct: 346 QPNR 349


>ref|XP_002306873.1| predicted protein [Populus trichocarpa] gi|222856322|gb|EEE93869.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  305 bits (781), Expect = 6e-81
 Identities = 149/244 (61%), Positives = 186/244 (76%)
 Frame = +3

Query: 3   GKLSEVYTECDKETVNGMLLIIVGKVVSEMEMGGLEQRLGAAAVTPSDDFSEDLWKTVWE 182
           GKL+EVY + DKET+NGMLL+IVG+VVSEME GGLEQ L  +  T S  FS DLWKTVWE
Sbjct: 105 GKLTEVYKDSDKETINGMLLVIVGEVVSEMEKGGLEQMLDVSVATLSQGFSRDLWKTVWE 164

Query: 183 VSNMVLEDXXXXXXXXXXXTFLQDDEVKEMYKFAGEAGIRGDMLRELRFKWAREKLEEAE 362
           VSN VL D            FLQ +EV+E+ +FA E GIRGDM+R+ RFKWAREK+EE++
Sbjct: 165 VSNAVLADMEKERKKEKMKGFLQCEEVQELCRFAAEIGIRGDMMRDFRFKWAREKMEESD 224

Query: 363 FYQGLERLREEDARLQEAEKSETVNEETVESDLVMAEEMKPKVISLPKRHGKIKYKIYGL 542
           FY+GL+RLREE  R QE  + E  N   +  +  + +E KPKV++LP RHGKI YKIYGL
Sbjct: 225 FYEGLKRLREE-VRAQEKAEEEGKNAVAMGEEAAIMDEEKPKVVTLPMRHGKINYKIYGL 283

Query: 543 DLSDPKWVEVADKIHKSGEIIWPQEAKPISGKCKLVTEKILSLQEDDNVSPLLAEWMELL 722
           DLS+PKW +VAD+IH+S ++ WP+E KPISGKCK+VTEKIL L+E+D+ SPLLA+W EL 
Sbjct: 284 DLSNPKWAKVADRIHESEKLDWPEEPKPISGKCKIVTEKILELKEEDDPSPLLAQWAELQ 343

Query: 723 KPNR 734
           KP+R
Sbjct: 344 KPSR 347


>ref|XP_004167043.1| PREDICTED: LOW QUALITY PROTEIN: protein NUCLEAR FUSION DEFECTIVE 5,
           mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  278 bits (712), Expect = 6e-73
 Identities = 148/243 (60%), Positives = 174/243 (71%)
 Frame = +3

Query: 6   KLSEVYTECDKETVNGMLLIIVGKVVSEMEMGGLEQRLGAAAVTPSDDFSEDLWKTVWEV 185
           K+SE + + DK+TVN MLL+IV KVVSEME G  EQ L A+   P  D SEDLWKTV EV
Sbjct: 115 KISEEFPDYDKQTVNAMLLMIVEKVVSEMEKGRFEQTLKASTDNPDWDLSEDLWKTVTEV 174

Query: 186 SNMVLEDXXXXXXXXXXXTFLQDDEVKEMYKFAGEAGIRGDMLRELRFKWAREKLEEAEF 365
           SNMVL+D            FL   EV+EM +FAGE GIRGDMLRE RFKWAREK+EE+EF
Sbjct: 175 SNMVLDDMKKATKKEKMKGFLLSREVQEMCRFAGEVGIRGDMLREFRFKWAREKMEESEF 234

Query: 366 YQGLERLREEDARLQEAEKSETVNEETVESDLVMAEEMKPKVISLPKRHGKIKYKIYGLD 545
           Y+ LE+LR+E AR QE  K      E        A E+K + +SLPKR GK+KYKIYGLD
Sbjct: 235 YESLEQLRKE-ARTQEENKDSASGAEA-------ASEVKSEAVSLPKRRGKLKYKIYGLD 286

Query: 546 LSDPKWVEVADKIHKSGEIIWPQEAKPISGKCKLVTEKILSLQEDDNVSPLLAEWMELLK 725
           LSDPKW E+ADK+H + ++I PQE KPISG CKLVTEKIL L E+D+ SPLLAEW ELL+
Sbjct: 287 LSDPKWSELADKLHVAEKLILPQEPKPISGMCKLVTEKILLLNENDDPSPLLAEWKELLQ 346

Query: 726 PNR 734
           P R
Sbjct: 347 PTR 349


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