BLASTX nr result

ID: Panax21_contig00014465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014465
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298685.1| predicted protein [Populus trichocarpa] gi|2...    73   5e-17
emb|CBI17224.3| unnamed protein product [Vitis vinifera]               74   8e-17
ref|XP_002269672.1| PREDICTED: probable methionyl-tRNA synthetas...    74   8e-17
ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-16
emb|CAN73803.1| hypothetical protein VITISV_028905 [Vitis vinifera]    74   3e-16

>ref|XP_002298685.1| predicted protein [Populus trichocarpa] gi|222845943|gb|EEE83490.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score = 72.8 bits (177), Expect(2) = 5e-17
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   VDPPQSAPVGERIMFSGFESKPDEVLNPKKKVWETIQPDLHTD 129
           VDPPQSA VGER+ F GFE +PD+VLNPKKKVWET+Q DL T+
Sbjct: 733 VDPPQSAVVGERVTFPGFEGEPDDVLNPKKKVWETLQVDLQTN 775



 Score = 39.7 bits (91), Expect(2) = 5e-17
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 191 ELVACYKDLPFTTSVGICKV 250
           +LVACYKD+P TTS G+CKV
Sbjct: 777 DLVACYKDIPLTTSAGVCKV 796


>emb|CBI17224.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score = 73.6 bits (179), Expect(2) = 8e-17
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +1

Query: 1    VDPPQSAPVGERIMFSGFESKPDEVLNPKKKVWETIQPDLHTD 129
            V+PPQSA VGER+ F GFE +PD+VLNPKKKVWET+Q DL TD
Sbjct: 877  VEPPQSAAVGERVTFPGFEGEPDDVLNPKKKVWETLQVDLRTD 919



 Score = 38.1 bits (87), Expect(2) = 8e-17
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +2

Query: 191 ELVACYKDLPFTTSVGICKV 250
           ELVA YKD+PFTT+ GICKV
Sbjct: 921 ELVALYKDVPFTTTAGICKV 940


>ref|XP_002269672.1| PREDICTED: probable methionyl-tRNA synthetase [Vitis vinifera]
          Length = 807

 Score = 73.6 bits (179), Expect(2) = 8e-17
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   VDPPQSAPVGERIMFSGFESKPDEVLNPKKKVWETIQPDLHTD 129
           V+PPQSA VGER+ F GFE +PD+VLNPKKKVWET+Q DL TD
Sbjct: 735 VEPPQSAAVGERVTFPGFEGEPDDVLNPKKKVWETLQVDLRTD 777



 Score = 38.1 bits (87), Expect(2) = 8e-17
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +2

Query: 191 ELVACYKDLPFTTSVGICKV 250
           ELVA YKD+PFTT+ GICKV
Sbjct: 779 ELVALYKDVPFTTTAGICKV 798


>ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|222839328|gb|EEE77665.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score = 70.9 bits (172), Expect(2) = 2e-16
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VDPPQSAPVGERIMFSGFESKPDEVLNPKKKVWETIQPDLHTD 129
           VDPP SA VGER+ F GFE +PD+VLNPKKKVWET+Q DL T+
Sbjct: 729 VDPPPSAVVGERVTFQGFEGEPDDVLNPKKKVWETLQVDLQTN 771



 Score = 39.3 bits (90), Expect(2) = 2e-16
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +2

Query: 191 ELVACYKDLPFTTSVGICKV 250
           +L+ACYKD+P TTS G+CKV
Sbjct: 773 DLIACYKDIPLTTSAGVCKV 792


>emb|CAN73803.1| hypothetical protein VITISV_028905 [Vitis vinifera]
          Length = 652

 Score = 74.3 bits (181), Expect(2) = 3e-16
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VDPPQSAPVGERIMFSGFESKPDEVLNPKKKVWETIQPDLHTD 129
           ++PP SA VGER+ F GFE KPD VLNPKKK+WET+Q DLHTD
Sbjct: 580 LEPPHSASVGERVTFPGFEGKPDRVLNPKKKIWETLQSDLHTD 622



 Score = 35.4 bits (80), Expect(2) = 3e-16
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +2

Query: 191 ELVACYKDLPFTTSVGICKV 250
           +L A YKD+PFTTS G+CKV
Sbjct: 624 QLFAFYKDVPFTTSAGVCKV 643


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