BLASTX nr result
ID: Panax21_contig00014431
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014431 (416 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange f... 69 2e-11 ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine ... 69 2e-11 emb|CBI28054.3| unnamed protein product [Vitis vinifera] 59 3e-11 ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange f... 59 3e-11 ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange f... 69 8e-11 >ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis sativus] Length = 676 Score = 50.1 bits (118), Expect(2) = 2e-11 Identities = 25/39 (64%), Positives = 29/39 (74%), Gaps = 4/39 (10%) Frame = -3 Query: 123 LSTMDMPSEHKVL----AIGTSIVIWKRKMIQKDAKSTW 19 LS+MD+ SEHK+L I SIVIW+RKM QKD KSTW Sbjct: 460 LSSMDLTSEHKILDLKDRIEASIVIWRRKMNQKDGKSTW 498 Score = 43.1 bits (100), Expect(2) = 2e-11 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 184 NGRSSLGDQIYKSITIEFFDP 122 NGR+SLGD IYKSIT+EFFDP Sbjct: 436 NGRASLGDSIYKSITVEFFDP 456 Score = 68.6 bits (166), Expect = 5e-10 Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 3/50 (6%) Frame = -1 Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201 FG Q +LEP +RK W+KE+D LSVTDYIVEFVPSQ KSKDGTNME+ Sbjct: 272 FGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEI 321 >ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 8-like [Cucumis sativus] Length = 553 Score = 50.1 bits (118), Expect(2) = 2e-11 Identities = 25/39 (64%), Positives = 29/39 (74%), Gaps = 4/39 (10%) Frame = -3 Query: 123 LSTMDMPSEHKVL----AIGTSIVIWKRKMIQKDAKSTW 19 LS+MD+ SEHK+L I SIVIW+RKM QKD KSTW Sbjct: 337 LSSMDLTSEHKILDLKDRIEASIVIWRRKMNQKDGKSTW 375 Score = 43.1 bits (100), Expect(2) = 2e-11 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 184 NGRSSLGDQIYKSITIEFFDP 122 NGR+SLGD IYKSIT+EFFDP Sbjct: 313 NGRASLGDSIYKSITVEFFDP 333 Score = 68.6 bits (166), Expect = 5e-10 Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 3/50 (6%) Frame = -1 Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201 FG Q +LEP +RK W+KE+D LSVTDYIVEFVPSQ KSKDGTNME+ Sbjct: 149 FGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEI 198 >emb|CBI28054.3| unnamed protein product [Vitis vinifera] Length = 536 Score = 49.7 bits (117), Expect(2) = 3e-11 Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 4/40 (10%) Frame = -3 Query: 126 ILSTMDMPSEHKVLA----IGTSIVIWKRKMIQKDAKSTW 19 +LSTMD+ ++HKVL I SIVIWKRKM KD KSTW Sbjct: 330 LLSTMDLSTDHKVLEFKNKIEASIVIWKRKMNHKDGKSTW 369 Score = 43.1 bits (100), Expect(2) = 3e-11 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 184 NGRSSLGDQIYKSITIEFFDP 122 NGR+SLGD IYKSIT+EFFDP Sbjct: 307 NGRASLGDSIYKSITVEFFDP 327 Score = 58.5 bits (140), Expect = 5e-07 Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%) Frame = -1 Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201 FG Q KLEP +RK W+K++D LSV DYIVE VPSQ +KDGT MEV Sbjct: 146 FGEQWKLEPMSAERKAMWRKDIDLLLSVADYIVELVPSQQTAKDGTTMEV 195 >ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Vitis vinifera] Length = 506 Score = 49.7 bits (117), Expect(2) = 3e-11 Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 4/40 (10%) Frame = -3 Query: 126 ILSTMDMPSEHKVLA----IGTSIVIWKRKMIQKDAKSTW 19 +LSTMD+ ++HKVL I SIVIWKRKM KD KSTW Sbjct: 281 LLSTMDLSTDHKVLEFKNKIEASIVIWKRKMNHKDGKSTW 320 Score = 43.1 bits (100), Expect(2) = 3e-11 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 184 NGRSSLGDQIYKSITIEFFDP 122 NGR+SLGD IYKSIT+EFFDP Sbjct: 258 NGRASLGDSIYKSITVEFFDP 278 Score = 58.5 bits (140), Expect = 5e-07 Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%) Frame = -1 Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201 FG Q KLEP +RK W+K++D LSV DYIVE VPSQ +KDGT MEV Sbjct: 97 FGEQWKLEPMSAERKAMWRKDIDLLLSVADYIVELVPSQQTAKDGTTMEV 146 >ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis sativus] gi|449516167|ref|XP_004165119.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis sativus] Length = 515 Score = 50.8 bits (120), Expect(2) = 8e-11 Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%) Frame = -3 Query: 123 LSTMDMPSEHKVL----AIGTSIVIWKRKMIQKDAKSTW 19 LSTMD+ SEHK+L I SIVIWKRKM QKD KS W Sbjct: 290 LSTMDLSSEHKILDLKDRIEASIVIWKRKMNQKDGKSAW 328 Score = 40.4 bits (93), Expect(2) = 8e-11 Identities = 16/21 (76%), Positives = 19/21 (90%) Frame = -2 Query: 184 NGRSSLGDQIYKSITIEFFDP 122 NGR SLGD IY++IT+EFFDP Sbjct: 266 NGRESLGDSIYRNITVEFFDP 286 Score = 68.6 bits (166), Expect = 5e-10 Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 3/50 (6%) Frame = -1 Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201 FG Q +LEP +RK W+KE+D LSVTDYIVEFVPSQ KSKDGTNME+ Sbjct: 100 FGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEI 149