BLASTX nr result

ID: Panax21_contig00014431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014431
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange f...    69   2e-11
ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine ...    69   2e-11
emb|CBI28054.3| unnamed protein product [Vitis vinifera]               59   3e-11
ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange f...    59   3e-11
ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange f...    69   8e-11

>ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 676

 Score = 50.1 bits (118), Expect(2) = 2e-11
 Identities = 25/39 (64%), Positives = 29/39 (74%), Gaps = 4/39 (10%)
 Frame = -3

Query: 123 LSTMDMPSEHKVL----AIGTSIVIWKRKMIQKDAKSTW 19
           LS+MD+ SEHK+L     I  SIVIW+RKM QKD KSTW
Sbjct: 460 LSSMDLTSEHKILDLKDRIEASIVIWRRKMNQKDGKSTW 498



 Score = 43.1 bits (100), Expect(2) = 2e-11
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -2

Query: 184 NGRSSLGDQIYKSITIEFFDP 122
           NGR+SLGD IYKSIT+EFFDP
Sbjct: 436 NGRASLGDSIYKSITVEFFDP 456



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = -1

Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201
           FG Q +LEP   +RK  W+KE+D  LSVTDYIVEFVPSQ KSKDGTNME+
Sbjct: 272 FGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEI 321


>ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange
           factor 8-like [Cucumis sativus]
          Length = 553

 Score = 50.1 bits (118), Expect(2) = 2e-11
 Identities = 25/39 (64%), Positives = 29/39 (74%), Gaps = 4/39 (10%)
 Frame = -3

Query: 123 LSTMDMPSEHKVL----AIGTSIVIWKRKMIQKDAKSTW 19
           LS+MD+ SEHK+L     I  SIVIW+RKM QKD KSTW
Sbjct: 337 LSSMDLTSEHKILDLKDRIEASIVIWRRKMNQKDGKSTW 375



 Score = 43.1 bits (100), Expect(2) = 2e-11
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -2

Query: 184 NGRSSLGDQIYKSITIEFFDP 122
           NGR+SLGD IYKSIT+EFFDP
Sbjct: 313 NGRASLGDSIYKSITVEFFDP 333



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = -1

Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201
           FG Q +LEP   +RK  W+KE+D  LSVTDYIVEFVPSQ KSKDGTNME+
Sbjct: 149 FGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEI 198


>emb|CBI28054.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 49.7 bits (117), Expect(2) = 3e-11
 Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
 Frame = -3

Query: 126 ILSTMDMPSEHKVLA----IGTSIVIWKRKMIQKDAKSTW 19
           +LSTMD+ ++HKVL     I  SIVIWKRKM  KD KSTW
Sbjct: 330 LLSTMDLSTDHKVLEFKNKIEASIVIWKRKMNHKDGKSTW 369



 Score = 43.1 bits (100), Expect(2) = 3e-11
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -2

Query: 184 NGRSSLGDQIYKSITIEFFDP 122
           NGR+SLGD IYKSIT+EFFDP
Sbjct: 307 NGRASLGDSIYKSITVEFFDP 327



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
 Frame = -1

Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201
           FG Q KLEP   +RK  W+K++D  LSV DYIVE VPSQ  +KDGT MEV
Sbjct: 146 FGEQWKLEPMSAERKAMWRKDIDLLLSVADYIVELVPSQQTAKDGTTMEV 195


>ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Vitis
           vinifera]
          Length = 506

 Score = 49.7 bits (117), Expect(2) = 3e-11
 Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
 Frame = -3

Query: 126 ILSTMDMPSEHKVLA----IGTSIVIWKRKMIQKDAKSTW 19
           +LSTMD+ ++HKVL     I  SIVIWKRKM  KD KSTW
Sbjct: 281 LLSTMDLSTDHKVLEFKNKIEASIVIWKRKMNHKDGKSTW 320



 Score = 43.1 bits (100), Expect(2) = 3e-11
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -2

Query: 184 NGRSSLGDQIYKSITIEFFDP 122
           NGR+SLGD IYKSIT+EFFDP
Sbjct: 258 NGRASLGDSIYKSITVEFFDP 278



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
 Frame = -1

Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201
           FG Q KLEP   +RK  W+K++D  LSV DYIVE VPSQ  +KDGT MEV
Sbjct: 97  FGEQWKLEPMSAERKAMWRKDIDLLLSVADYIVELVPSQQTAKDGTTMEV 146


>ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus] gi|449516167|ref|XP_004165119.1| PREDICTED: rho
           guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 515

 Score = 50.8 bits (120), Expect(2) = 8e-11
 Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
 Frame = -3

Query: 123 LSTMDMPSEHKVL----AIGTSIVIWKRKMIQKDAKSTW 19
           LSTMD+ SEHK+L     I  SIVIWKRKM QKD KS W
Sbjct: 290 LSTMDLSSEHKILDLKDRIEASIVIWKRKMNQKDGKSAW 328



 Score = 40.4 bits (93), Expect(2) = 8e-11
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -2

Query: 184 NGRSSLGDQIYKSITIEFFDP 122
           NGR SLGD IY++IT+EFFDP
Sbjct: 266 NGRESLGDSIYRNITVEFFDP 286



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = -1

Query: 341 FG*QRKLEP---DRKLGWKKEVD*PLSVTDYIVEFVPSQPKSKDGTNMEV 201
           FG Q +LEP   +RK  W+KE+D  LSVTDYIVEFVPSQ KSKDGTNME+
Sbjct: 100 FGEQWRLEPMSVERKARWRKEIDLLLSVTDYIVEFVPSQQKSKDGTNMEI 149


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