BLASTX nr result

ID: Panax21_contig00014412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014412
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30926.3| unnamed protein product [Vitis vinifera]              219   3e-55
ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g...   219   3e-55
emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]   219   3e-55
ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g...   197   1e-48
ref|XP_002305041.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48

>emb|CBI30926.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  219 bits (557), Expect = 3e-55
 Identities = 112/159 (70%), Positives = 129/159 (81%)
 Frame = -2

Query: 535 IIPSDVPMYPAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWXXXXXXXXXXX 356
           IIPSDVP+YPA G Y + DSIVS+R +P +L A HVPEL GY+D GS W           
Sbjct: 50  IIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVS 109

Query: 355 XYGGASRSEELIIRVLCSFSKIGRVIGKGGSSIKGVRQASGARVEVDDKKADRDECIITI 176
            YG ASRSEELIIRVLC F KIGRVIG+GGSSIK VR+ASGA VEVDD KADRDEC+IT+
Sbjct: 110 GYG-ASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITV 168

Query: 175 TATETLEDMKSMAVEAVLLLQEKINDEDDETVSIRLLVP 59
           T+TE+++D+KSMAVEAVLLLQ KINDEDD+TV+IRLLVP
Sbjct: 169 TSTESVDDLKSMAVEAVLLLQAKINDEDDDTVAIRLLVP 207


>ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
          Length = 623

 Score =  219 bits (557), Expect = 3e-55
 Identities = 112/159 (70%), Positives = 129/159 (81%)
 Frame = -2

Query: 535 IIPSDVPMYPAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWXXXXXXXXXXX 356
           IIPSDVP+YPA G Y + DSIVS+R +P +L A HVPEL GY+D GS W           
Sbjct: 238 IIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVS 297

Query: 355 XYGGASRSEELIIRVLCSFSKIGRVIGKGGSSIKGVRQASGARVEVDDKKADRDECIITI 176
            YG ASRSEELIIRVLC F KIGRVIG+GGSSIK VR+ASGA VEVDD KADRDEC+IT+
Sbjct: 298 GYG-ASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITV 356

Query: 175 TATETLEDMKSMAVEAVLLLQEKINDEDDETVSIRLLVP 59
           T+TE+++D+KSMAVEAVLLLQ KINDEDD+TV+IRLLVP
Sbjct: 357 TSTESVDDLKSMAVEAVLLLQAKINDEDDDTVAIRLLVP 395


>emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
          Length = 637

 Score =  219 bits (557), Expect = 3e-55
 Identities = 112/159 (70%), Positives = 129/159 (81%)
 Frame = -2

Query: 535 IIPSDVPMYPAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWXXXXXXXXXXX 356
           IIPSDVP+YPA G Y + DSIVS+R +P +L A HVPEL GY+D GS W           
Sbjct: 238 IIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVS 297

Query: 355 XYGGASRSEELIIRVLCSFSKIGRVIGKGGSSIKGVRQASGARVEVDDKKADRDECIITI 176
            YG ASRSEELIIRVLC F KIGRVIG+GGSSIK VR+ASGA VEVDD KADRDEC+IT+
Sbjct: 298 GYG-ASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITV 356

Query: 175 TATETLEDMKSMAVEAVLLLQEKINDEDDETVSIRLLVP 59
           T+TE+++D+KSMAVEAVLLLQ KINDEDD+TV+IRLLVP
Sbjct: 357 TSTESVDDLKSMAVEAVLLLQAKINDEDDDTVAIRLLVP 395


>ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 625

 Score =  197 bits (500), Expect = 1e-48
 Identities = 103/159 (64%), Positives = 120/159 (75%)
 Frame = -2

Query: 535 IIPSDVPMYPAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWXXXXXXXXXXX 356
           IIPSDVP+YP  GLY   D IV+ R +P I+GA +VP+L GYAD G++W           
Sbjct: 238 IIPSDVPVYPPGGLYPASDPIVTPRAVPQIIGATNVPDLQGYADAGNSWPMYSSALPVVS 297

Query: 355 XYGGASRSEELIIRVLCSFSKIGRVIGKGGSSIKGVRQASGARVEVDDKKADRDECIITI 176
             G ASRSEELIIR+LC   KIGRVIGKGGS+IK +RQASGA +EVDD KA+ DEC+I I
Sbjct: 298 GVG-ASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIII 356

Query: 175 TATETLEDMKSMAVEAVLLLQEKINDEDDETVSIRLLVP 59
           T TE+  D+KSMAVEAVLL+Q KINDEDD TVSIRLLVP
Sbjct: 357 TTTESPSDLKSMAVEAVLLMQGKINDEDDTTVSIRLLVP 395


>ref|XP_002305041.1| predicted protein [Populus trichocarpa] gi|222848005|gb|EEE85552.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  197 bits (500), Expect = 1e-48
 Identities = 101/159 (63%), Positives = 117/159 (73%)
 Frame = -2

Query: 535 IIPSDVPMYPAAGLYQNVDSIVSSRPLPSILGAAHVPELSGYADTGSAWXXXXXXXXXXX 356
           II SDVP+Y   G Y N D IVSSR +P ILGA H+PE  GY D  S+W           
Sbjct: 237 IISSDVPIYQPGGFYPNADPIVSSRSVPPILGATHIPEFQGYGDMRSSWPIYSSTVPVVP 296

Query: 355 XYGGASRSEELIIRVLCSFSKIGRVIGKGGSSIKGVRQASGARVEVDDKKADRDECIITI 176
            +G  SRSE LIIR+LC F KIGRVIGKGGS+IK +RQ SGAR+EVDD KADRDECIIT+
Sbjct: 297 SFGNTSRSE-LIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITV 355

Query: 175 TATETLEDMKSMAVEAVLLLQEKINDEDDETVSIRLLVP 59
            ATE+ +D+KSMAVEA+LLLQ KINDED++ V IR LVP
Sbjct: 356 IATESPDDLKSMAVEAILLLQGKINDEDNDIVGIRFLVP 394


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