BLASTX nr result

ID: Panax21_contig00014389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014389
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotei...   109   3e-22
ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotei...   109   3e-22
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei...   109   3e-22
emb|CBI17535.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...   109   3e-22

>ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
           [Glycine max]
          Length = 465

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/58 (86%), Positives = 56/58 (96%)
 Frame = -3

Query: 174 RAAEELEKYDPRNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVHLVSDK 1
           +AAEELEKYDP NDPN+SGDPYKTLFVA+L+YETTESRIKREFE+YGPIKRV LV+DK
Sbjct: 119 KAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADK 176



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -2

Query: 451 LLKLFEPRPPLEYKQPPEKRKCPPYTGMAQFVNNFAEPSDPE 326
           LLKLFEPRPPLEYK PPEKRKCPP +GMAQFV+ FAEP +PE
Sbjct: 49  LLKLFEPRPPLEYKPPPEKRKCPPLSGMAQFVSKFAEPGEPE 90


>ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
           [Glycine max]
          Length = 482

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/58 (86%), Positives = 56/58 (96%)
 Frame = -3

Query: 174 RAAEELEKYDPRNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVHLVSDK 1
           +AAEELEKYDP NDPN+SGDPYKTLFVA+L+YETTESRIKREFE+YGPIKRV LV+DK
Sbjct: 119 KAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADK 176



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -2

Query: 451 LLKLFEPRPPLEYKQPPEKRKCPPYTGMAQFVNNFAEPSDPE 326
           LLKLFEPRPPLEYK PPEKRKCPP +GMAQFV+ FAEP +PE
Sbjct: 49  LLKLFEPRPPLEYKPPPEKRKCPPLSGMAQFVSKFAEPGEPE 90


>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
           max]
          Length = 481

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/58 (86%), Positives = 56/58 (96%)
 Frame = -3

Query: 174 RAAEELEKYDPRNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVHLVSDK 1
           +AAEELEKYDP NDPN+SGDPYKTLFVA+L+YETTESRIKREFE+YGPIKRV LV+DK
Sbjct: 119 KAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADK 176



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -2

Query: 451 LLKLFEPRPPLEYKQPPEKRKCPPYTGMAQFVNNFAEPSDPE 326
           LLKLFEPRPPLEYK PPEKRKCPP +GMAQFV+ FA+P DPE
Sbjct: 49  LLKLFEPRPPLEYKPPPEKRKCPPLSGMAQFVSKFAQPGDPE 90


>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/58 (86%), Positives = 54/58 (93%)
 Frame = -3

Query: 174 RAAEELEKYDPRNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVHLVSDK 1
           +A EE +KYDP NDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRV L++DK
Sbjct: 116 KATEEFQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDK 173



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = -2

Query: 451 LLKLFEPRPPLEYKQPPEKRKCPPYTGMAQFVNNFAEPSDPE 326
           LLKLFEPRPPLE+K PPEKRKCPPYTGMAQF +NFAEP +PE
Sbjct: 46  LLKLFEPRPPLEFKPPPEKRKCPPYTGMAQFASNFAEPGEPE 87


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/58 (86%), Positives = 54/58 (93%)
 Frame = -3

Query: 174 RAAEELEKYDPRNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVHLVSDK 1
           +A EE +KYDP NDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRV L++DK
Sbjct: 116 KATEEFQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDK 173



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = -2

Query: 451 LLKLFEPRPPLEYKQPPEKRKCPPYTGMAQFVNNFAEPSDPE 326
           LLKLFEPRPPLE+K PPEKRKCPPYTGMAQF +NFAEP +PE
Sbjct: 46  LLKLFEPRPPLEFKPPPEKRKCPPYTGMAQFASNFAEPGEPE 87


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