BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014372
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152667.1| PREDICTED: transcription initiation factor I...   145   3e-32
ref|XP_002300734.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-32
ref|XP_002279990.2| PREDICTED: transcription initiation factor I...   144   8e-32
ref|XP_002307692.1| predicted protein [Populus trichocarpa] gi|1...   144   8e-32
emb|CBI19782.3| unnamed protein product [Vitis vinifera]              144   8e-32

>ref|XP_004152667.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Cucumis sativus] gi|449520699|ref|XP_004167371.1|
           PREDICTED: transcription initiation factor IIF subunit
           beta-like [Cucumis sativus]
          Length = 260

 Score =  145 bits (366), Expect = 3e-32
 Identities = 76/96 (79%), Positives = 82/96 (85%), Gaps = 6/96 (6%)
 Frame = -1

Query: 801 VLSFTI*DKKKAAPVKVSDVKRTRRDRGELEDIMFKL--R*PNWALKQLVQETDQPVQFL 628
           ++S T  +KKK APVK SDVKRTRRDRGELEDIMFKL  R PNWALKQLVQETDQP QFL
Sbjct: 165 LISSTSKEKKKVAPVKQSDVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFL 224

Query: 627 KEILNELCMYNKR----GTYELKPEYKKTVDDTGAE 532
           KEILNELC+YNKR    GTYELKPEYKK+V+DTG E
Sbjct: 225 KEILNELCVYNKRGTNQGTYELKPEYKKSVEDTGGE 260


>ref|XP_002300734.1| predicted protein [Populus trichocarpa] gi|222842460|gb|EEE80007.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  145 bits (366), Expect = 3e-32
 Identities = 76/96 (79%), Positives = 81/96 (84%), Gaps = 6/96 (6%)
 Frame = -1

Query: 801 VLSFTI*DKKKAAPVKVSDVKRTRRDRGELEDIMFKL--R*PNWALKQLVQETDQPVQFL 628
           ++S T  DKKK  PVK SDVKRTRRDRGELEDIMFKL  R PNWALKQLVQETDQP QFL
Sbjct: 170 LISSTSKDKKKTQPVKQSDVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFL 229

Query: 627 KEILNELCMYNKR----GTYELKPEYKKTVDDTGAE 532
           KEILNELC+YNKR    GTYELKPEYKKT +DTGA+
Sbjct: 230 KEILNELCVYNKRGTNQGTYELKPEYKKTAEDTGAD 265


>ref|XP_002279990.2| PREDICTED: transcription initiation factor IIF subunit beta [Vitis
           vinifera]
          Length = 260

 Score =  144 bits (362), Expect = 8e-32
 Identities = 74/89 (83%), Positives = 78/89 (87%), Gaps = 6/89 (6%)
 Frame = -1

Query: 780 DKKKAAPVKVSDVKRTRRDRGELEDIMFKL--R*PNWALKQLVQETDQPVQFLKEILNEL 607
           DKKK APVK SD+KRTRRDRGELEDIMFKL  R PNWALKQLVQETDQP QFLKEILNEL
Sbjct: 172 DKKKTAPVKGSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNEL 231

Query: 606 CMYNKR----GTYELKPEYKKTVDDTGAE 532
           C+YNKR    GTYELKPEYKK+ +DTGAE
Sbjct: 232 CVYNKRGTNQGTYELKPEYKKSAEDTGAE 260



 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 23/39 (58%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
 Frame = -2

Query: 986 CPLVVCNSWKS--AADNQIVSKVVVSLDPLRPEDPSSLQ 876
           CPL V  SW+S  ++++Q V+KVV+SLDPLR EDPS+L+
Sbjct: 27  CPLAVSKSWQSHSSSESQPVAKVVLSLDPLRSEDPSALE 65



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = -1

Query: 1047 NTNSNLDTR*SERSVWLMKC 988
            +++SNL+T  +ERSVWLMKC
Sbjct: 8    SSSSNLETGKAERSVWLMKC 27


>ref|XP_002307692.1| predicted protein [Populus trichocarpa] gi|118481065|gb|ABK92486.1|
           unknown [Populus trichocarpa]
           gi|222857141|gb|EEE94688.1| predicted protein [Populus
           trichocarpa]
          Length = 261

 Score =  144 bits (362), Expect = 8e-32
 Identities = 74/89 (83%), Positives = 78/89 (87%), Gaps = 6/89 (6%)
 Frame = -1

Query: 780 DKKKAAPVKVSDVKRTRRDRGELEDIMFKL--R*PNWALKQLVQETDQPVQFLKEILNEL 607
           DKK+  PVK SDVKRTRRDRGELEDIMFKL  R PNWALKQLVQETDQP QFLKEILNEL
Sbjct: 173 DKKRPQPVKQSDVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNEL 232

Query: 606 CMYNKR----GTYELKPEYKKTVDDTGAE 532
           C+YNKR    GTYELKPEYKKTV+DTGA+
Sbjct: 233 CVYNKRGTNQGTYELKPEYKKTVEDTGAD 261


>emb|CBI19782.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  144 bits (362), Expect = 8e-32
 Identities = 74/89 (83%), Positives = 78/89 (87%), Gaps = 6/89 (6%)
 Frame = -1

Query: 780 DKKKAAPVKVSDVKRTRRDRGELEDIMFKL--R*PNWALKQLVQETDQPVQFLKEILNEL 607
           DKKK APVK SD+KRTRRDRGELEDIMFKL  R PNWALKQLVQETDQP QFLKEILNEL
Sbjct: 171 DKKKTAPVKGSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNEL 230

Query: 606 CMYNKR----GTYELKPEYKKTVDDTGAE 532
           C+YNKR    GTYELKPEYKK+ +DTGAE
Sbjct: 231 CVYNKRGTNQGTYELKPEYKKSAEDTGAE 259



 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 23/39 (58%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
 Frame = -2

Query: 986 CPLVVCNSWKS--AADNQIVSKVVVSLDPLRPEDPSSLQ 876
           CPL V  SW+S  ++++Q V+KVV+SLDPLR EDPS+L+
Sbjct: 27  CPLAVSKSWQSHSSSESQPVAKVVLSLDPLRSEDPSALE 65



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = -1

Query: 1047 NTNSNLDTR*SERSVWLMKC 988
            +++SNL+T  +ERSVWLMKC
Sbjct: 8    SSSSNLETGKAERSVWLMKC 27