BLASTX nr result

ID: Panax21_contig00014367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014367
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P83618.2|RN28_PANGI RecName: Full=Ribonuclease-like storage p...   457   e-126
ref|NP_563940.1| Ribonuclease T2 family protein [Arabidopsis tha...   125   1e-26
ref|XP_002892795.1| ribonuclease T2 family protein [Arabidopsis ...   124   2e-26
gb|AAQ22605.1| At1g14210 [Arabidopsis thaliana]                       123   7e-26
ref|XP_003613789.1| Ribonuclease T2 [Medicago truncatula] gi|355...   121   2e-25

>sp|P83618.2|RN28_PANGI RecName: Full=Ribonuclease-like storage protein; AltName: Full=Root
           28 kDa major protein; Flags: Precursor
           gi|40557610|gb|AAR88098.1| RNase-like major storage
           protein [Panax ginseng]
          Length = 238

 Score =  457 bits (1177), Expect = e-126
 Identities = 215/226 (95%), Positives = 220/226 (97%)
 Frame = -3

Query: 892 SLSIFSWGGNARSDYPLAMFALRLQWPAGFCEVNNACDTKSLLNTFTIHGLYPYNEKGTP 713
           SLSIFSWGGNARSDYP AMFALRLQWPAGFCEVNNACDTKSLLNTFTIHGLYPYN KGTP
Sbjct: 13  SLSIFSWGGNARSDYPWAMFALRLQWPAGFCEVNNACDTKSLLNTFTIHGLYPYNAKGTP 72

Query: 712 GLYCDGTAFDVNSVSDFRAEMHLAWPSHETNTEDVQFWEYEWKKHGRCSEALLKQTDYFR 533
            LYCDGTAFDVNSVSDF AEMHLAWPSHETNTED+QFWE+EWKKHGRCSEALLKQTDYFR
Sbjct: 73  ALYCDGTAFDVNSVSDFLAEMHLAWPSHETNTEDIQFWEHEWKKHGRCSEALLKQTDYFR 132

Query: 532 TALAFRKAFDIIGLLNQEGIHPNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTD 353
           TALAFRKAFDI+GLLNQEGI+PNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTD
Sbjct: 133 TALAFRKAFDIVGLLNQEGIYPNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTD 192

Query: 352 INVCMNQQATRFVDCPTDDATDDYRLKFVTLPSKMKIADPRTNSII 215
           INVC+NQQATRFVDCPTDDATDDYRLKFV LPSKMK ADPRTNSII
Sbjct: 193 INVCVNQQATRFVDCPTDDATDDYRLKFVRLPSKMKFADPRTNSII 238


>ref|NP_563940.1| Ribonuclease T2 family protein [Arabidopsis thaliana]
           gi|332191002|gb|AEE29123.1| Ribonuclease T2 family
           protein [Arabidopsis thaliana]
          Length = 247

 Score =  125 bits (314), Expect = 1e-26
 Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
 Frame = -3

Query: 817 WPAGFCEVNNACDTKSLLNT---FTIHGLYPYNEKGTPGLYCDGT-AFDVNSVSDFRAEM 650
           WP   C+    C   +  NT   F IHGL+P    GT   +CD T  FD++ +SD   +M
Sbjct: 35  WPGAICDSQKGCCPPTKGNTASDFIIHGLWPQFNNGTWPAFCDQTNLFDISKISDLVCQM 94

Query: 649 HLAW--------PSHETNTEDVQFWEYEWKKHGRCSEALLKQTDYFRTALAFRKAFDIIG 494
              W        PS+ETN      WE+EW KHG C +++  Q  YFRT L F+    ++ 
Sbjct: 95  EKKWTEWGVWACPSNETN-----LWEHEWNKHGTCVQSIFDQHSYFRTNLKFKHKVHLLN 149

Query: 493 LLNQEGIHPNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTDINVCMNQQATRFV 314
           +L Q+GI PN+  Y    IK AIK  +   P I+  ++      L  I +C++  A  FV
Sbjct: 150 ILIQKGIKPNDGFYSLDEIKNAIKCAIGFAPGIECNEDVKGNKQLFQIYICLDNYAKEFV 209

Query: 313 DCP-TDDATDDYRLKFVTLPSK 251
           +CP   D +   ++KF +LP +
Sbjct: 210 ECPYVPDKSCASKIKFPSLPER 231


>ref|XP_002892795.1| ribonuclease T2 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338637|gb|EFH69054.1| ribonuclease T2 family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 247

 Score =  124 bits (312), Expect = 2e-26
 Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
 Frame = -3

Query: 817 WPAGFCEVNNACDTKSLLNT---FTIHGLYPYNEKGTPGLYCDGT-AFDVNSVSDFRAEM 650
           WP   C+    C   +  NT   F IHGL+P    GT   +CD T  FD++ +SD   ++
Sbjct: 35  WPGAICDSQRGCCPPTKGNTAPDFIIHGLWPQFNNGTWPAFCDQTNLFDISKISDLVCQV 94

Query: 649 HLAW--------PSHETNTEDVQFWEYEWKKHGRCSEALLKQTDYFRTALAFRKAFDIIG 494
              W        PS+ETN      WE+EW KHG C +++  Q  YF T L FR  F+++ 
Sbjct: 95  EKKWTEWGVWACPSNETN-----LWEHEWNKHGTCVQSIFDQHSYFLTNLKFRYKFNLLN 149

Query: 493 LLNQEGIHPNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTDINVCMNQQATRFV 314
           +L Q+GI PN+  Y    IK AIK  +   P I+  ++      L  I +C++  A  FV
Sbjct: 150 ILKQKGIKPNDGFYSLDEIKNAIKCVIGFAPGIECNEDVKGNKQLFQIYICLDNYAKEFV 209

Query: 313 DCP-TDDATDDYRLKFVTLPSKMKIAD 236
           +CP   D +   ++KF   P +  +++
Sbjct: 210 ECPYVPDKSCASKIKFPKFPERDSLSE 236


>gb|AAQ22605.1| At1g14210 [Arabidopsis thaliana]
          Length = 247

 Score =  123 bits (308), Expect = 7e-26
 Identities = 69/202 (34%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
 Frame = -3

Query: 817 WPAGFCEVNNACDTKSLLNT---FTIHGLYPYNEKGTPGLYCDGT-AFDVNSVSDFRAEM 650
           WP   C+    C   +  NT   F IHGL+P    GT   +CD T  FD++ +SD   +M
Sbjct: 35  WPGAICDSQKGCCPPTKGNTASDFIIHGLWPQFNNGTWPAFCDQTNLFDISKISDLVCQM 94

Query: 649 HLAW--------PSHETNTEDVQFWEYEWKKHGRCSEALLKQTDYFRTALAFRKAFDIIG 494
              W        P +ETN      WE+EW KHG C +++  Q  YFRT L F+    ++ 
Sbjct: 95  EKKWTEWGVWACPINETN-----LWEHEWNKHGTCVQSIFDQHSYFRTNLKFKHKVHLLN 149

Query: 493 LLNQEGIHPNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTDINVCMNQQATRFV 314
           +L Q+GI PN+  Y    IK AIK  +   P I+  ++      L  I +C++  A  FV
Sbjct: 150 ILIQKGIKPNDGFYSLDEIKNAIKCAIGFAPGIECNEDVKGNKQLFQIYICLDNYAKEFV 209

Query: 313 DCP-TDDATDDYRLKFVTLPSK 251
           +CP   D +   ++KF +LP +
Sbjct: 210 ECPYVPDKSCASKIKFPSLPER 231


>ref|XP_003613789.1| Ribonuclease T2 [Medicago truncatula] gi|355515124|gb|AES96747.1|
           Ribonuclease T2 [Medicago truncatula]
          Length = 228

 Score =  121 bits (304), Expect = 2e-25
 Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 5/177 (2%)
 Frame = -3

Query: 820 QWPAGFCEVNNAC---DTKSLLNTFTIHGLYPYNEKGTPGLYCD-GTAFDVNSVSDFRAE 653
           QWP  +C+   +C    T      F IHGL+P  + GT    CD   AFD + +SD ++ 
Sbjct: 36  QWPGSYCDSKKSCCYPTTGKPAADFGIHGLWPNYKDGTYPSNCDPNNAFDPSQISDLKSN 95

Query: 652 MHLAWPSHETNTED-VQFWEYEWKKHGRCSEALLKQTDYFRTALAFRKAFDIIGLLNQEG 476
           +   WP+    + D +QFW +EW+KHG CSE++LKQ DYF T L  R+  +++  L   G
Sbjct: 96  LQQNWPTLACPSGDGIQFWTHEWEKHGTCSESVLKQHDYFETTLNLRQKANLLQALTSAG 155

Query: 475 IHPNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTDINVCMNQQATRFVDCP 305
           + P+ + Y    IK AI+  +   P I+   + +    L  + +C++   + F+DCP
Sbjct: 156 VQPDGNSYSLSSIKGAIQNAVGFAPFIECNVDSSGNSQLYQVYLCVDTSGSNFIDCP 212


Top