BLASTX nr result

ID: Panax21_contig00014360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014360
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274629.2| PREDICTED: uncharacterized protein LOC100252...    62   4e-08
gb|ABC86742.1| RNA recognition motif-containing protein [Vitis p...    62   6e-08
ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    62   6e-08
ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicag...    59   3e-07
ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803...    59   4e-07

>ref|XP_002274629.2| PREDICTED: uncharacterized protein LOC100252755 [Vitis vinifera]
           gi|147777236|emb|CAN76637.1| hypothetical protein
           VITISV_010659 [Vitis vinifera]
           gi|296083375|emb|CBI23264.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/51 (62%), Positives = 34/51 (66%)
 Frame = +1

Query: 1   DRPKGXXXXXXXXXXXXXXXVKLFSGLVTLYNRTLKFAISGQDKPSPNLLT 153
           +RPKG               VKLFSGLVTLYNRTLKFAISGQDKPSP  +T
Sbjct: 45  ERPKGYAFAEYETEEIAEYAVKLFSGLVTLYNRTLKFAISGQDKPSPAAIT 95


>gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
          Length = 194

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/62 (58%), Positives = 37/62 (59%)
 Frame = +1

Query: 1   DRPKGXXXXXXXXXXXXXXXVKLFSGLVTLYNRTLKFAISGQDKPSPNLLTAGTPTLKSG 180
           DRPKG               VKLFSGLVTLYNRTLKFAISGQDKPS     A TPT  S 
Sbjct: 45  DRPKGFAFAEYETEEIADYAVKLFSGLVTLYNRTLKFAISGQDKPSS---AAITPTSNSS 101

Query: 181 FK 186
            +
Sbjct: 102 LE 103


>ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|297734803|emb|CBI17037.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/62 (58%), Positives = 37/62 (59%)
 Frame = +1

Query: 1   DRPKGXXXXXXXXXXXXXXXVKLFSGLVTLYNRTLKFAISGQDKPSPNLLTAGTPTLKSG 180
           DRPKG               VKLFSGLVTLYNRTLKFAISGQDKPS     A TPT  S 
Sbjct: 45  DRPKGFAFAEYETEEIADYAVKLFSGLVTLYNRTLKFAISGQDKPSS---AAITPTSNSS 101

Query: 181 FK 186
            +
Sbjct: 102 LE 103


>ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
           gi|355481049|gb|AES62252.1| Peptidyl-prolyl cis-trans
           isomerase [Medicago truncatula]
          Length = 200

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/59 (52%), Positives = 37/59 (62%)
 Frame = +1

Query: 1   DRPKGXXXXXXXXXXXXXXXVKLFSGLVTLYNRTLKFAISGQDKPSPNLLTAGTPTLKS 177
           ++PKG               V+LFSGLVTLY RTLKFAISG+DK +PN  TA TP+  S
Sbjct: 45  EKPKGFAFAEYETEEIADYAVRLFSGLVTLYKRTLKFAISGRDKNTPNSSTATTPSSNS 103


>ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803118 [Glycine max]
          Length = 196

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/59 (52%), Positives = 37/59 (62%)
 Frame = +1

Query: 1   DRPKGXXXXXXXXXXXXXXXVKLFSGLVTLYNRTLKFAISGQDKPSPNLLTAGTPTLKS 177
           ++PKG               V+LFSGL+TLYNRTLKFAISG+DK + N  TA  PTL S
Sbjct: 45  EKPKGFAFAEYETEEIADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAIAPTLNS 103


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