BLASTX nr result

ID: Panax21_contig00014355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014355
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265113.1| PREDICTED: uncharacterized protein LOC100257...    94   1e-17
gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]                  92   4e-17
gb|AAN77150.1| fiber protein Fb11 [Gossypium barbadense]               91   8e-17
gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]                  87   1e-15
ref|XP_002302638.1| predicted protein [Populus trichocarpa] gi|1...    87   1e-15

>ref|XP_002265113.1| PREDICTED: uncharacterized protein LOC100257117 [Vitis vinifera]
           gi|297745487|emb|CBI40567.3| unnamed protein product
           [Vitis vinifera]
          Length = 65

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = +2

Query: 2   EPVVAASCLIAGVGLFLPAVVRPILDSLESSKRVPQPDLSDVVAGMTGKKQ 154
           EPVVAASC IAGVGLFLPAVVRPILDSLE+SK+VPQP LSDVVAGMTGKKQ
Sbjct: 14  EPVVAASCFIAGVGLFLPAVVRPILDSLETSKQVPQPALSDVVAGMTGKKQ 64


>gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]
          Length = 65

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/52 (88%), Positives = 48/52 (92%)
 Frame = +2

Query: 2   EPVVAASCLIAGVGLFLPAVVRPILDSLESSKRVPQPDLSDVVAGMTGKKQQ 157
           EPVVAASCLIAG GLFLPAVVRPILDS ESSK+VP P LSDVVAGMTGKKQ+
Sbjct: 14  EPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPAPPLSDVVAGMTGKKQE 65


>gb|AAN77150.1| fiber protein Fb11 [Gossypium barbadense]
          Length = 65

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = +2

Query: 2   EPVVAASCLIAGVGLFLPAVVRPILDSLESSKRVPQPDLSDVVAGMTGKKQ 154
           EPVVAASCLIAG GLFLPAVVRPILDSLESSK+VPQP L DVVAG+TGKKQ
Sbjct: 14  EPVVAASCLIAGFGLFLPAVVRPILDSLESSKQVPQPALRDVVAGVTGKKQ 64


>gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]
          Length = 64

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/51 (84%), Positives = 46/51 (90%)
 Frame = +2

Query: 2   EPVVAASCLIAGVGLFLPAVVRPILDSLESSKRVPQPDLSDVVAGMTGKKQ 154
           EPVV ASCLIAG GLFLPAVVRPILDS E+SK+VP P L+DVVAGMTGKKQ
Sbjct: 14  EPVVTASCLIAGFGLFLPAVVRPILDSFETSKQVPPPALNDVVAGMTGKKQ 64


>ref|XP_002302638.1| predicted protein [Populus trichocarpa] gi|118482840|gb|ABK93335.1|
           unknown [Populus trichocarpa]
           gi|222844364|gb|EEE81911.1| predicted protein [Populus
           trichocarpa]
          Length = 67

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/53 (83%), Positives = 48/53 (90%), Gaps = 2/53 (3%)
 Frame = +2

Query: 2   EPVVAASCLIAGVGLFLPAVVRPILDSLESSKRVP--QPDLSDVVAGMTGKKQ 154
           EPVVAASCLIAG+GLFLPAVVRPILDSLE SK VP  QP +SDV+AGMTGK+Q
Sbjct: 14  EPVVAASCLIAGIGLFLPAVVRPILDSLEGSKHVPEKQPSISDVLAGMTGKRQ 66


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