BLASTX nr result

ID: Panax21_contig00014348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014348
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633430.1| PREDICTED: probable inactive serine/threonin...   191   1e-46
ref|XP_002280870.1| PREDICTED: probable inactive serine/threonin...   191   1e-46
emb|CAN63376.1| hypothetical protein VITISV_042412 [Vitis vinifera]   189   5e-46
ref|XP_002325930.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
ref|XP_002280879.1| PREDICTED: probable inactive serine/threonin...   186   3e-45

>ref|XP_003633430.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1
            [Vitis vinifera]
          Length = 788

 Score =  191 bits (485), Expect = 1e-46
 Identities = 99/141 (70%), Positives = 107/141 (75%)
 Frame = -3

Query: 658  GWGELDNGIHEDDGSDKEGWDDIEPLEDPKPSPALANIQAAQKRPVSQPKQVSNLIPKST 479
            GWGEL+NGIHE+  SDK+GWDDIEPLE+PKP  ALANIQAAQKRPVSQPK      PK  
Sbjct: 645  GWGELENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQVPSRPKIP 704

Query: 478  GHVHKDEDDDLWGSIAAPAPRSASKPLTVKTRVXXXXXXXXXXXXXXXPTTRAKPLSAGR 299
              V KDEDDDLWGSIAAPAP++ASKPL VKT                 PTTRAKPLSAGR
Sbjct: 705  PKVSKDEDDDLWGSIAAPAPKTASKPLNVKTAGAVDNDDPWAAIAAPPPTTRAKPLSAGR 764

Query: 298  GRGSKPAASKLGAQRINRSSS 236
            GRG+KPAA KLGAQRINR+SS
Sbjct: 765  GRGAKPAAPKLGAQRINRTSS 785


>ref|XP_002280870.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1
            isoform 1 [Vitis vinifera] gi|297736476|emb|CBI25347.3|
            unnamed protein product [Vitis vinifera]
          Length = 794

 Score =  191 bits (485), Expect = 1e-46
 Identities = 99/141 (70%), Positives = 107/141 (75%)
 Frame = -3

Query: 658  GWGELDNGIHEDDGSDKEGWDDIEPLEDPKPSPALANIQAAQKRPVSQPKQVSNLIPKST 479
            GWGEL+NGIHE+  SDK+GWDDIEPLE+PKP  ALANIQAAQKRPVSQPK      PK  
Sbjct: 651  GWGELENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQVPSRPKIP 710

Query: 478  GHVHKDEDDDLWGSIAAPAPRSASKPLTVKTRVXXXXXXXXXXXXXXXPTTRAKPLSAGR 299
              V KDEDDDLWGSIAAPAP++ASKPL VKT                 PTTRAKPLSAGR
Sbjct: 711  PKVSKDEDDDLWGSIAAPAPKTASKPLNVKTAGAVDNDDPWAAIAAPPPTTRAKPLSAGR 770

Query: 298  GRGSKPAASKLGAQRINRSSS 236
            GRG+KPAA KLGAQRINR+SS
Sbjct: 771  GRGAKPAAPKLGAQRINRTSS 791


>emb|CAN63376.1| hypothetical protein VITISV_042412 [Vitis vinifera]
          Length = 770

 Score =  189 bits (479), Expect = 5e-46
 Identities = 98/141 (69%), Positives = 106/141 (75%)
 Frame = -3

Query: 658  GWGELDNGIHEDDGSDKEGWDDIEPLEDPKPSPALANIQAAQKRPVSQPKQVSNLIPKST 479
            GWGEL+NGIHE+  SDK+GWDDIEPLE+PKP  ALANIQAAQKRPVSQPK      PK  
Sbjct: 627  GWGELENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQVPSRPKIP 686

Query: 478  GHVHKDEDDDLWGSIAAPAPRSASKPLTVKTRVXXXXXXXXXXXXXXXPTTRAKPLSAGR 299
              V KDEDDDLWGSIAAPAP++ASKPL VKT                 PT RAKPLSAGR
Sbjct: 687  PKVSKDEDDDLWGSIAAPAPKTASKPLNVKTAGAVDDDDPWAAIAAPPPTXRAKPLSAGR 746

Query: 298  GRGSKPAASKLGAQRINRSSS 236
            GRG+KPAA KLGAQRINR+SS
Sbjct: 747  GRGAKPAAPKLGAQRINRTSS 767


>ref|XP_002325930.1| predicted protein [Populus trichocarpa] gi|222862805|gb|EEF00312.1|
            predicted protein [Populus trichocarpa]
          Length = 794

 Score =  187 bits (475), Expect = 2e-45
 Identities = 97/146 (66%), Positives = 110/146 (75%), Gaps = 5/146 (3%)
 Frame = -3

Query: 658  GWGELDNGIHEDDGSDKEGWDDIEPLEDPKPSPALANIQAAQKRPVSQP-----KQVSNL 494
            GWGE++NGIHE+ GSDK+GWDDIEP E+PKPSPAL NIQAAQKRPVSQP      Q ++L
Sbjct: 647  GWGEIENGIHEEQGSDKDGWDDIEPFEEPKPSPALVNIQAAQKRPVSQPVSQHKAQATSL 706

Query: 493  IPKSTGHVHKDEDDDLWGSIAAPAPRSASKPLTVKTRVXXXXXXXXXXXXXXXPTTRAKP 314
             PKST  V  DEDDDLWGSIAAPAP++ ++PL VK+                 PTTRAKP
Sbjct: 707  RPKSTVKVTNDEDDDLWGSIAAPAPKTTTRPLNVKSATALDDDDPWAAIAAPPPTTRAKP 766

Query: 313  LSAGRGRGSKPAASKLGAQRINRSSS 236
            L AGRGRG KPAASKLGAQRINR+SS
Sbjct: 767  LVAGRGRG-KPAASKLGAQRINRTSS 791


>ref|XP_002280879.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1
            isoform 2 [Vitis vinifera]
          Length = 808

 Score =  186 bits (472), Expect = 3e-45
 Identities = 101/164 (61%), Positives = 110/164 (67%), Gaps = 23/164 (14%)
 Frame = -3

Query: 658  GWGELDNGIHEDDGSDKEGWDDIEPLEDPKPSPALANIQAAQKRPVSQPKQVSNLI---- 491
            GWGEL+NGIHE+  SDK+GWDDIEPLE+PKP  ALANIQAAQKRPVSQPK   N+I    
Sbjct: 642  GWGELENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQGNIISLAS 701

Query: 490  -------------------PKSTGHVHKDEDDDLWGSIAAPAPRSASKPLTVKTRVXXXX 368
                               PK    V KDEDDDLWGSIAAPAP++ASKPL VKT      
Sbjct: 702  SCFPVAYLMGDFLCAVPSRPKIPPKVSKDEDDDLWGSIAAPAPKTASKPLNVKTAGAVDN 761

Query: 367  XXXXXXXXXXXPTTRAKPLSAGRGRGSKPAASKLGAQRINRSSS 236
                       PTTRAKPLSAGRGRG+KPAA KLGAQRINR+SS
Sbjct: 762  DDPWAAIAAPPPTTRAKPLSAGRGRGAKPAAPKLGAQRINRTSS 805


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