BLASTX nr result

ID: Panax21_contig00014325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014325
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing p...   144   3e-32
emb|CBI33743.3| unnamed protein product [Vitis vinifera]              142   1e-31
ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing p...   142   1e-31
ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ri...   141   2e-31
ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|2...   139   9e-31

>ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
           [Cucumis sativus] gi|449513123|ref|XP_004164237.1|
           PREDICTED: F-box-like/WD repeat-containing protein
           TBL1XR1-like [Cucumis sativus]
          Length = 594

 Score =  144 bits (364), Expect = 3e-32
 Identities = 71/119 (59%), Positives = 82/119 (68%)
 Frame = -1

Query: 738 GEVNSVKWGPTSSMLASCSNDITTKIWSLQNDKYVHDLRDHAKAIYTIRWSPFGQGTRNP 559
           GEVN VKW PT S+LASCS+DIT KIWS++ DKYV+DLR+H+K IYTIRWSP G GT NP
Sbjct: 430 GEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNP 489

Query: 558 NKKLVLVRYATP*HH*ENNY*ADILICLAFTFLSASFDSTVKIWDVELGRLICSFNGHR 382
           N++LVL                           SASFDSTVK+WDVELG+LICS NGHR
Sbjct: 490 NQQLVLA--------------------------SASFDSTVKLWDVELGKLICSLNGHR 522


>emb|CBI33743.3| unnamed protein product [Vitis vinifera]
          Length = 725

 Score =  142 bits (358), Expect = 1e-31
 Identities = 69/119 (57%), Positives = 80/119 (67%)
 Frame = -1

Query: 738 GEVNSVKWGPTSSMLASCSNDITTKIWSLQNDKYVHDLRDHAKAIYTIRWSPFGQGTRNP 559
           GEVN VKW PT  +LASCS+DIT KIWS++ +KY+HDLR+HAK IYTIRWSP GQGT NP
Sbjct: 561 GEVNCVKWDPTGQLLASCSDDITAKIWSIKQEKYLHDLREHAKEIYTIRWSPTGQGTNNP 620

Query: 558 NKKLVLVRYATP*HH*ENNY*ADILICLAFTFLSASFDSTVKIWDVELGRLICSFNGHR 382
           N+ LVL                           SASFDSTVK+WDVE G+L+CS NGHR
Sbjct: 621 NQPLVLA--------------------------SASFDSTVKLWDVEQGKLLCSLNGHR 653


>ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1X-like
           isoform 1 [Vitis vinifera]
          Length = 590

 Score =  142 bits (358), Expect = 1e-31
 Identities = 69/119 (57%), Positives = 80/119 (67%)
 Frame = -1

Query: 738 GEVNSVKWGPTSSMLASCSNDITTKIWSLQNDKYVHDLRDHAKAIYTIRWSPFGQGTRNP 559
           GEVN VKW PT  +LASCS+DIT KIWS++ +KY+HDLR+HAK IYTIRWSP GQGT NP
Sbjct: 426 GEVNCVKWDPTGQLLASCSDDITAKIWSIKQEKYLHDLREHAKEIYTIRWSPTGQGTNNP 485

Query: 558 NKKLVLVRYATP*HH*ENNY*ADILICLAFTFLSASFDSTVKIWDVELGRLICSFNGHR 382
           N+ LVL                           SASFDSTVK+WDVE G+L+CS NGHR
Sbjct: 486 NQPLVLA--------------------------SASFDSTVKLWDVEQGKLLCSLNGHR 518


>ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ricinus communis]
           gi|223535779|gb|EEF37441.1| Polyadenylation factor
           subunit, putative [Ricinus communis]
          Length = 582

 Score =  141 bits (356), Expect = 2e-31
 Identities = 68/119 (57%), Positives = 82/119 (68%)
 Frame = -1

Query: 738 GEVNSVKWGPTSSMLASCSNDITTKIWSLQNDKYVHDLRDHAKAIYTIRWSPFGQGTRNP 559
           GEVN VKW PT S+LASCS+DI+ KIWS++ DKYVHDLR+H+K IYTIRWSP G GT NP
Sbjct: 418 GEVNCVKWDPTGSLLASCSDDISAKIWSMKQDKYVHDLREHSKEIYTIRWSPTGPGTNNP 477

Query: 558 NKKLVLVRYATP*HH*ENNY*ADILICLAFTFLSASFDSTVKIWDVELGRLICSFNGHR 382
           N++LVL                           SASFDSTVK+WDVELG+L+C+ +GHR
Sbjct: 478 NQQLVLA--------------------------SASFDSTVKLWDVELGKLLCTLSGHR 510


>ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|222831838|gb|EEE70315.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score =  139 bits (351), Expect = 9e-31
 Identities = 68/119 (57%), Positives = 79/119 (66%)
 Frame = -1

Query: 738 GEVNSVKWGPTSSMLASCSNDITTKIWSLQNDKYVHDLRDHAKAIYTIRWSPFGQGTRNP 559
           GEVN VKW PT S LASCS+DI+ KIWS++ +KYVHDLR+H+K IYTIRWSP G GT NP
Sbjct: 368 GEVNCVKWDPTGSWLASCSDDISAKIWSMKQEKYVHDLREHSKEIYTIRWSPTGPGTNNP 427

Query: 558 NKKLVLVRYATP*HH*ENNY*ADILICLAFTFLSASFDSTVKIWDVELGRLICSFNGHR 382
           N+ LVL                           SASFDSTVK+WDVE G+L+CS NGHR
Sbjct: 428 NQPLVLA--------------------------SASFDSTVKLWDVEFGKLLCSLNGHR 460


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