BLASTX nr result

ID: Panax21_contig00014311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014311
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [V...   167   1e-39
ref|XP_002312631.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
gb|AAT44125.1| 20S proteasome beta subunit E [Saussurea medusa]       157   7e-37
ref|XP_004144192.1| PREDICTED: proteasome subunit beta type-5-li...   157   1e-36
ref|NP_189265.1| proteasome subunit beta type-5-B [Arabidopsis t...   155   3e-36

>ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [Vitis vinifera]
           gi|297738390|emb|CBI27591.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/99 (83%), Positives = 90/99 (90%)
 Frame = +2

Query: 131 MKIDFSGLESSASFCGANTELFDGFSTTPSFQIPDTTDFDGFQKDAIQMVKPAKGTTTLA 310
           MK+D SGLES+    GAN+EL  GFS  PSF++P+TTDFDGFQKDAIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLESTVPLFGANSELLGGFSAAPSFELPNTTDFDGFQKDAIQMVKPAKGTTTLA 60

Query: 311 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPHMLGT 427
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINP+MLGT
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99


>ref|XP_002312631.1| predicted protein [Populus trichocarpa] gi|222852451|gb|EEE89998.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/100 (80%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
 Frame = +2

Query: 131 MKIDFSGLESSASFCG-ANTELFDGFSTTPSFQIPDTTDFDGFQKDAIQMVKPAKGTTTL 307
           MK D SGLES+AS  G A +EL DGFS  P+F++P TTDFDGFQK+A+QMVKPAKGTTTL
Sbjct: 1   MKFDTSGLESTASVFGTAGSELVDGFSAAPAFELPTTTDFDGFQKEAVQMVKPAKGTTTL 60

Query: 308 AFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPHMLGT 427
           AFIFK+GV+VAADSRASMGGYISSQSVKKIIEINP+MLGT
Sbjct: 61  AFIFKDGVIVAADSRASMGGYISSQSVKKIIEINPYMLGT 100


>gb|AAT44125.1| 20S proteasome beta subunit E [Saussurea medusa]
          Length = 150

 Score =  157 bits (398), Expect = 7e-37
 Identities = 81/100 (81%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
 Frame = +2

Query: 131 MKIDFSGLESSASFCGANTE-LFDGFSTTPSFQIPDTTDFDGFQKDAIQMVKPAKGTTTL 307
           MK+DF GLESSA   G N + L DGFST PSF +P T+DFDGFQK +IQMVKPAKGTTTL
Sbjct: 1   MKLDFGGLESSAPLYGGNDDVLSDGFSTAPSFDLPVTSDFDGFQKSSIQMVKPAKGTTTL 60

Query: 308 AFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPHMLGT 427
           AFIFKEGVMVAA+SRASMGGYISSQSVKKIIEINP+MLGT
Sbjct: 61  AFIFKEGVMVAANSRASMGGYISSQSVKKIIEINPYMLGT 100


>ref|XP_004144192.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
           gi|449529978|ref|XP_004171974.1| PREDICTED: proteasome
           subunit beta type-5-like [Cucumis sativus]
          Length = 272

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/99 (77%), Positives = 88/99 (88%)
 Frame = +2

Query: 131 MKIDFSGLESSASFCGANTELFDGFSTTPSFQIPDTTDFDGFQKDAIQMVKPAKGTTTLA 310
           MK+D SGL+++A   G   E  +GF+  PSF+IP+++DFDGFQKDAIQMVKPAKGTTTLA
Sbjct: 1   MKLDTSGLQTTAPLFGPTMEAMEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLA 60

Query: 311 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPHMLGT 427
           FIFKEGVMVAADSRASMGGYISSQSVKKIIEINP+MLGT
Sbjct: 61  FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 99


>ref|NP_189265.1| proteasome subunit beta type-5-B [Arabidopsis thaliana]
           gi|75273433|sp|Q9LIP2.1|PSB5B_ARATH RecName:
           Full=Proteasome subunit beta type-5-B; AltName: Full=20S
           proteasome beta subunit E-2; AltName: Full=Proteasome
           epsilon-2 chain; Flags: Precursor
           gi|16612308|gb|AAL27514.1|AF439846_1 AT3g26340/F20C19_6
           [Arabidopsis thaliana] gi|9294292|dbj|BAB02194.1|
           proteasome epsilon chain precursor [Arabidopsis
           thaliana] gi|21553804|gb|AAM62897.1| 26S proteasome beta
           subunit, putative [Arabidopsis thaliana]
           gi|21928101|gb|AAM78079.1| AT3g26340/F20C19_6
           [Arabidopsis thaliana] gi|332643626|gb|AEE77147.1|
           proteasome subunit beta type-5-B [Arabidopsis thaliana]
          Length = 273

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/101 (77%), Positives = 89/101 (88%), Gaps = 2/101 (1%)
 Frame = +2

Query: 131 MKIDFSGLESSASFCG--ANTELFDGFSTTPSFQIPDTTDFDGFQKDAIQMVKPAKGTTT 304
           MK+D SGLE++    G  +N+E+ DGFS+ PSF +P TTDFDGFQK A++MVKPAKGTTT
Sbjct: 1   MKLDTSGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVKPAKGTTT 60

Query: 305 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPHMLGT 427
           LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINP+MLGT
Sbjct: 61  LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGT 101


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