BLASTX nr result

ID: Panax21_contig00014310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014310
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36765.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...   162   3e-38
ref|XP_002275434.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...   158   5e-37
ref|XP_003536081.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   157   1e-36
ref|XP_002328439.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36

>emb|CBI36765.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/126 (63%), Positives = 91/126 (72%)
 Frame = +2

Query: 5   KRTPDQTVELTNEAVEFLKETFSTFDIDGDGALRTVELEDLFSTSPESPWSVPPYEDAAE 184
           KR PDQ +ELT EA+EFLK  FS FDIDGDGAL   EL DLFST+PESPW   PY+DAAE
Sbjct: 342 KRAPDQNMELTTEALEFLKGIFSLFDIDGDGALHPDELVDLFSTAPESPWIEAPYKDAAE 401

Query: 185 RTSLGGISLDGFLSEWALMTLQDPIRSVENLIYIGYTGDPSSAIXXXXXXXXXXXXXXXX 364
           +T+LGG+SLDGFLSEWAL+TL DP+ S+ENLIYIGY GDP SA+                
Sbjct: 402 KTALGGLSLDGFLSEWALLTLLDPVSSLENLIYIGYAGDPPSAMRVTRKRRLDRKKQQSD 461

Query: 365 XTVFQC 382
             VFQC
Sbjct: 462 RNVFQC 467


>ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
          Length = 647

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/126 (63%), Positives = 91/126 (72%)
 Frame = +2

Query: 5   KRTPDQTVELTNEAVEFLKETFSTFDIDGDGALRTVELEDLFSTSPESPWSVPPYEDAAE 184
           KR PDQ +ELT EA+EFLK  FS FDIDGDGAL   EL DLFST+PESPW   PY+DAAE
Sbjct: 305 KRAPDQNMELTTEALEFLKGIFSLFDIDGDGALHPDELVDLFSTAPESPWIEAPYKDAAE 364

Query: 185 RTSLGGISLDGFLSEWALMTLQDPIRSVENLIYIGYTGDPSSAIXXXXXXXXXXXXXXXX 364
           +T+LGG+SLDGFLSEWAL+TL DP+ S+ENLIYIGY GDP SA+                
Sbjct: 365 KTALGGLSLDGFLSEWALLTLLDPVSSLENLIYIGYAGDPPSAMRVTRKRRLDRKKQQSD 424

Query: 365 XTVFQC 382
             VFQC
Sbjct: 425 RNVFQC 430


>ref|XP_002275434.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
           gi|296086704|emb|CBI32339.3| unnamed protein product
           [Vitis vinifera]
          Length = 639

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/126 (61%), Positives = 91/126 (72%)
 Frame = +2

Query: 5   KRTPDQTVELTNEAVEFLKETFSTFDIDGDGALRTVELEDLFSTSPESPWSVPPYEDAAE 184
           KR PDQ+VELT+E++EFLK  F+ FDID DGALR  +L+DLFST+PESPW   PY DAAE
Sbjct: 297 KRAPDQSVELTSESLEFLKRVFNLFDIDNDGALRHDDLDDLFSTAPESPWHEAPYRDAAE 356

Query: 185 RTSLGGISLDGFLSEWALMTLQDPIRSVENLIYIGYTGDPSSAIXXXXXXXXXXXXXXXX 364
           RT++G +SL+GFLSEWALMTL DP  S+ NLIYIGY GDPSSA+                
Sbjct: 357 RTAMGALSLNGFLSEWALMTLLDPASSLANLIYIGYAGDPSSALRATRRRSLDRKKRQTE 416

Query: 365 XTVFQC 382
             VFQC
Sbjct: 417 RNVFQC 422


>ref|XP_003536081.1| PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max]
          Length = 646

 Score =  157 bits (396), Expect = 1e-36
 Identities = 78/127 (61%), Positives = 90/127 (70%)
 Frame = +2

Query: 2   IKRTPDQTVELTNEAVEFLKETFSTFDIDGDGALRTVELEDLFSTSPESPWSVPPYEDAA 181
           IKR PDQ+VELTNEA+EFL+  F  FD DGDG LR  E+E+LFST+PESPW+  PYEDAA
Sbjct: 303 IKRAPDQSVELTNEAIEFLRAIFDAFDSDGDGMLRPREIEELFSTAPESPWTGIPYEDAA 362

Query: 182 ERTSLGGISLDGFLSEWALMTLQDPIRSVENLIYIGYTGDPSSAIXXXXXXXXXXXXXXX 361
           E+ + GG+SL+ FLSEWALMTL +P  SVENLIYIGY GDPSSAI               
Sbjct: 363 EKNAFGGLSLEAFLSEWALMTLLNPTFSVENLIYIGYPGDPSSAIRVTRRRRMDRKKQHS 422

Query: 362 XXTVFQC 382
              V QC
Sbjct: 423 DRNVLQC 429


>ref|XP_002328439.1| predicted protein [Populus trichocarpa] gi|222838154|gb|EEE76519.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/126 (58%), Positives = 90/126 (71%)
 Frame = +2

Query: 5   KRTPDQTVELTNEAVEFLKETFSTFDIDGDGALRTVELEDLFSTSPESPWSVPPYEDAAE 184
           K  PDQ+VELT+EAVE+L+  +  FD DGD  LR  ELED+FST+PESPW  PPY+DAAE
Sbjct: 309 KLAPDQSVELTSEAVEYLRNIYELFDSDGDNNLRPAELEDIFSTAPESPWEEPPYKDAAE 368

Query: 185 RTSLGGISLDGFLSEWALMTLQDPIRSVENLIYIGYTGDPSSAIXXXXXXXXXXXXXXXX 364
           +T+LGG+S + FLSEWALMTL DP R+VENLIYIGY+GDPS+A+                
Sbjct: 369 KTALGGLSANAFLSEWALMTLLDPSRAVENLIYIGYSGDPSAAVRLTRRRRLDRKKKQSD 428

Query: 365 XTVFQC 382
             VF C
Sbjct: 429 RNVFHC 434


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