BLASTX nr result
ID: Panax21_contig00014298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00014298
(1165 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat... 472 e-131
ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|2... 462 e-128
ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat... 448 e-123
ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat... 430 e-118
ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat... 430 e-118
>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 472 bits (1214), Expect = e-131
Identities = 227/294 (77%), Positives = 255/294 (86%)
Frame = +1
Query: 1 YGIHGQGEIAVQLFDEMIRAGIHPDGTVFVSVLSACSHAGLTDRGLGYFNAMERIYGLRP 180
YG+HGQGE+AVQLFDEMI + PDG FVSVLSACSHAGLT++GL YF AMER YGL+P
Sbjct: 336 YGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQP 395
Query: 181 GSEHYSCIVDLLGRAGRLKEARSLIESMSEEPDGAVWGALLGACKIHRNVELAELAFQRV 360
G EHYSC+VDLLGRAGRL+EAR LI SMS EPDGAVWGALLGACKIHRNVELAELAF++V
Sbjct: 396 GPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKV 455
Query: 361 IKLEPTNIGYYVLLSNIYSEADNMEGILRVRVMMRERKLRKDPGCSYVEYEGRTHLFLVG 540
I+ EPTNIGYYVLLSNI+SEA NMEGILRVRVMMRERKL+K+PGCSYVEY+GR HLFL G
Sbjct: 456 IEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAG 515
Query: 541 DRSHPQTEGIYAMLDRLEDLIRETDKPNEYDQDRRNSELASSMGVHSERLAIAFALLNSG 720
DR+HPQ + IY MLD LED+I+ N+ DQ+ RN EL + MGVHSE+LAIAF L+N+
Sbjct: 516 DRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQESRNEELITGMGVHSEKLAIAFGLINTE 575
Query: 721 VGTEILVTKNLRVCGDCHLFIKLVSKIVDRQFVVRDATRFHHFRNGFCSCHDYW 882
GTEI V KNLRVCGDCHLF+KLVS+IVDRQ VVRDATRFHHF+NG CSC DYW
Sbjct: 576 PGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629
>ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|222855398|gb|EEE92945.1|
predicted protein [Populus trichocarpa]
Length = 582
Score = 462 bits (1188), Expect = e-128
Identities = 219/294 (74%), Positives = 255/294 (86%)
Frame = +1
Query: 1 YGIHGQGEIAVQLFDEMIRAGIHPDGTVFVSVLSACSHAGLTDRGLGYFNAMERIYGLRP 180
YG+HGQGE+AV LFDEMIR GI PDGT FVSVLSACSHAGLT++GL YF MER YGLRP
Sbjct: 290 YGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRP 349
Query: 181 GSEHYSCIVDLLGRAGRLKEARSLIESMSEEPDGAVWGALLGACKIHRNVELAELAFQRV 360
G+EHYSC+VDLLGRAGRL EAR LIESM DGA+WGALLGACKIHRNVELAELAF++V
Sbjct: 350 GAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQV 409
Query: 361 IKLEPTNIGYYVLLSNIYSEADNMEGILRVRVMMRERKLRKDPGCSYVEYEGRTHLFLVG 540
I+LEPTN GYYVLLSN+Y+EA N+EGILRVR++MR+RKL+KDPGCSYVE++GR HLF G
Sbjct: 410 IELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAG 469
Query: 541 DRSHPQTEGIYAMLDRLEDLIRETDKPNEYDQDRRNSELASSMGVHSERLAIAFALLNSG 720
DR+HPQT IY L+ LE+L+++ D + D +RR E +SMGVHSE+LA+AFALLN+
Sbjct: 470 DRNHPQTNEIYKKLNELENLVKDLDGCKKNDHERR-EEYLNSMGVHSEKLAVAFALLNTR 528
Query: 721 VGTEILVTKNLRVCGDCHLFIKLVSKIVDRQFVVRDATRFHHFRNGFCSCHDYW 882
TEI++ KNLR+CGDCHLFIKLVSKIVDRQFVVRDATRFHHF+NGFCSC +YW
Sbjct: 529 KETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 57.8 bits (138), Expect = 5e-06
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 1 YGIHGQGEIAVQLFDEMIRAGIHPDGTVFVSVLSACSHAGLTDRGLGYFNAMERIYGLRP 180
Y +G ++L+ EM G PD V VLS+C+H G G ME +G
Sbjct: 189 YAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEG-FGFSS 247
Query: 181 GSEHYSCIVDLLGRAGRLKEARSLIESMSEEPDGAVWGALLGACKIHRNVELAELAFQRV 360
+ +V++ R G LK+AR + + M + W A++G +H E+A F +
Sbjct: 248 NPFLNNALVNMYARCGNLKKARDIFDGMPVK-SVVSWTAIIGGYGMHGQGEVAVGLFDEM 306
Query: 361 IK--LEPTNIGYYVLLSNIYSEADNMEGILRVRVMMRERKLRKDPGCSY 501
I+ ++P + +LS +G+ VM R+ LR PG +
Sbjct: 307 IRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLR--PGAEH 353
>ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 448 bits (1153), Expect = e-123
Identities = 217/294 (73%), Positives = 250/294 (85%)
Frame = +1
Query: 1 YGIHGQGEIAVQLFDEMIRAGIHPDGTVFVSVLSACSHAGLTDRGLGYFNAMERIYGLRP 180
YGIHG GE+A++LFDEM+ + + PD TVFVSVLSACSHAGLTDRGL YF MER YGL+P
Sbjct: 338 YGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGLTDRGLEYFKEMERKYGLQP 397
Query: 181 GSEHYSCIVDLLGRAGRLKEARSLIESMSEEPDGAVWGALLGACKIHRNVELAELAFQRV 360
G EHYSC+VDLLGRAGRL+EA +LI+SM +PDGAVWGALLGACKIH+N E+AELAFQ V
Sbjct: 398 GPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGAVWGALLGACKIHKNAEIAELAFQHV 457
Query: 361 IKLEPTNIGYYVLLSNIYSEADNMEGILRVRVMMRERKLRKDPGCSYVEYEGRTHLFLVG 540
++LEPTNIGYYVLLSNIY++A+N+EG+ RVRVMMRERKLRKDPG SYVEY+G+ +LF G
Sbjct: 458 VELEPTNIGYYVLLSNIYTDANNLEGVSRVRVMMRERKLRKDPGYSYVEYKGKMNLFYSG 517
Query: 541 DRSHPQTEGIYAMLDRLEDLIRETDKPNEYDQDRRNSELASSMGVHSERLAIAFALLNSG 720
D SHPQT+ IY MLD LE L++E PNE Q R+ EL GVHSE+LAIAFALLN+
Sbjct: 518 DLSHPQTKQIYRMLDELESLVKEVHPPNEKCQG-RSEELLIGTGVHSEKLAIAFALLNTK 576
Query: 721 VGTEILVTKNLRVCGDCHLFIKLVSKIVDRQFVVRDATRFHHFRNGFCSCHDYW 882
GTEI V KNLRVC DCHLFIKLVSKIV+RQF+VRDATRFHHFR+G CSC DYW
Sbjct: 577 SGTEITVMKNLRVCVDCHLFIKLVSKIVNRQFIVRDATRFHHFRDGICSCKDYW 630
>ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 430 bits (1105), Expect = e-118
Identities = 204/295 (69%), Positives = 247/295 (83%), Gaps = 1/295 (0%)
Frame = +1
Query: 1 YGIHGQGEIAVQLFDEMIRAGIHPDGTVFVSVLSACSHAGLTDRGLGYFNAMERIYGLRP 180
YG+HG GEIAVQLF EMIR+GI PDGT FV VLSACSHAGLTD+GL YF M+R Y L P
Sbjct: 320 YGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEP 379
Query: 181 GSEHYSCIVDLLGRAGRLKEARSLIESMSEEPDGAVWGALLGACKIHRNVELAELAFQRV 360
G EHYSC+VDLLGRAGRLKEA++LIESM +PDGAVWGALLGACKIH+NVELAELAF+RV
Sbjct: 380 GPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERV 439
Query: 361 IKLEPTNIGYYVLLSNIYSEADNMEGILRVRVMMRERKLRKDPGCSYVEYEGRTHLFLVG 540
I+LEP NIGYYVLLSNIYS A+N +G+LR+R+MM+E+KL+KDPGCSYVE +GR H F+VG
Sbjct: 440 IELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVG 499
Query: 541 DRSHPQTEGIYAMLDRLEDLI-RETDKPNEYDQDRRNSELASSMGVHSERLAIAFALLNS 717
DR+H Q++ IY +L+ LE +I +E KP + +++ N + + +GVHSE+LA+AF LLN+
Sbjct: 500 DRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNKDGFTRVGVHSEKLAVAFGLLNT 559
Query: 718 GVGTEILVTKNLRVCGDCHLFIKLVSKIVDRQFVVRDATRFHHFRNGFCSCHDYW 882
G E+++ KNLR+C DCHLF K+VSKIV RQ VRDATRFHHFRNG CSC DYW
Sbjct: 560 TTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
>ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 430 bits (1105), Expect = e-118
Identities = 204/295 (69%), Positives = 247/295 (83%), Gaps = 1/295 (0%)
Frame = +1
Query: 1 YGIHGQGEIAVQLFDEMIRAGIHPDGTVFVSVLSACSHAGLTDRGLGYFNAMERIYGLRP 180
YG+HG GEIAVQLF EMIR+GI PDGT FV VLSACSHAGLTD+GL YF M+R Y L P
Sbjct: 329 YGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEP 388
Query: 181 GSEHYSCIVDLLGRAGRLKEARSLIESMSEEPDGAVWGALLGACKIHRNVELAELAFQRV 360
G EHYSC+VDLLGRAGRLKEA++LIESM +PDGAVWGALLGACKIH+NVELAELAF+RV
Sbjct: 389 GPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERV 448
Query: 361 IKLEPTNIGYYVLLSNIYSEADNMEGILRVRVMMRERKLRKDPGCSYVEYEGRTHLFLVG 540
I+LEP NIGYYVLLSNIYS A+N +G+LR+R+MM+E+KL+KDPGCSYVE +GR H F+VG
Sbjct: 449 IELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVG 508
Query: 541 DRSHPQTEGIYAMLDRLEDLI-RETDKPNEYDQDRRNSELASSMGVHSERLAIAFALLNS 717
DR+H Q++ IY +L+ LE +I +E KP + +++ N + + +GVHSE+LA+AF LLN+
Sbjct: 509 DRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNKDGFTRVGVHSEKLAVAFGLLNT 568
Query: 718 GVGTEILVTKNLRVCGDCHLFIKLVSKIVDRQFVVRDATRFHHFRNGFCSCHDYW 882
G E+++ KNLR+C DCHLF K+VSKIV RQ VRDATRFHHFRNG CSC DYW
Sbjct: 569 TTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623