BLASTX nr result

ID: Panax21_contig00014294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014294
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|...   226   2e-57
ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|1...   226   2e-57
ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]    222   5e-56
ref|XP_002532906.1| Blue copper protein precursor, putative [Ric...   219   4e-55
emb|CBI22267.3| unnamed protein product [Vitis vinifera]              218   9e-55

>ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|87240662|gb|ABD32520.1|
           Blue (type 1) copper domain [Medicago truncatula]
           gi|355493609|gb|AES74812.1| Lamin-like protein [Medicago
           truncatula] gi|388499076|gb|AFK37604.1| unknown
           [Medicago truncatula]
          Length = 179

 Score =  226 bits (576), Expect = 2e-57
 Identities = 100/133 (75%), Positives = 115/133 (86%)
 Frame = +1

Query: 205 TVVVLTCAVMMMVMLPEVSSTRFIVGGNMGWTSNVNYTIWVQDRHFYLDDWLFFVYDRNQ 384
           T+V L     ++VMLP VS+TRF+VGG MGW +N NYT W + +HFY  DWLFFVYDRNQ
Sbjct: 16  TMVFLLLGFAVLVMLPMVSATRFMVGGRMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQ 75

Query: 385 MNVLEVNKTNYETCNSDNPIHNWTTGAGRDVVPLNVTRNYYFISGKGFCYGGMKLAVHVE 564
           MNVLEVNKT+YETCNSD+P+HNWTTGAGRDVVPLNVTR+YYFISGKGFC+GGMKLAVHVE
Sbjct: 76  MNVLEVNKTDYETCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCFGGMKLAVHVE 135

Query: 565 KLPPPPSALPEKS 603
            LPPPP A PE++
Sbjct: 136 NLPPPPKAAPERA 148


>ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|118482789|gb|ABK93312.1|
           unknown [Populus trichocarpa]
           gi|222867084|gb|EEF04215.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score =  226 bits (576), Expect = 2e-57
 Identities = 104/136 (76%), Positives = 116/136 (85%), Gaps = 2/136 (1%)
 Frame = +1

Query: 208 VVVLTCAVMMMVMLPEVSSTRFIVGGNMGWTSNVNYTIWVQDRHFYLDDWLFFVYDRNQM 387
           V +      M+VM+PEVS+TR+ VG NMGWTSNVNYTIW Q +HFY  DWLFFVYDRNQM
Sbjct: 13  VALAVLVFAMVVMVPEVSATRWTVGSNMGWTSNVNYTIWAQGKHFYNGDWLFFVYDRNQM 72

Query: 388 NVLEVNKTNYETCNSDNPIHNWTTGAGRDVVPLNVTRNYYFISGKGFCYGGMKLAVHVEK 567
           N+LEVNKT+YE+CNSD+P+HNWT GAGRDVVPLNVTRNYYFISGKGFCYGGMKLAVHVE 
Sbjct: 73  NILEVNKTDYESCNSDHPLHNWTRGAGRDVVPLNVTRNYYFISGKGFCYGGMKLAVHVEN 132

Query: 568 LPPPPSALP--EKSHS 609
            PPPP+A P  EKS S
Sbjct: 133 PPPPPTASPLDEKSGS 148


>ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 171

 Score =  222 bits (565), Expect = 5e-56
 Identities = 98/130 (75%), Positives = 116/130 (89%)
 Frame = +1

Query: 211 VVLTCAVMMMVMLPEVSSTRFIVGGNMGWTSNVNYTIWVQDRHFYLDDWLFFVYDRNQMN 390
           VVL CAV++M  LP+VS+TR+ VGGN GW++NVNYT+W +D+HFY  DWLFFVYDRNQMN
Sbjct: 10  VVLMCAVVLM--LPDVSATRWTVGGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMN 67

Query: 391 VLEVNKTNYETCNSDNPIHNWTTGAGRDVVPLNVTRNYYFISGKGFCYGGMKLAVHVEKL 570
           VLEVN+TNYE+CNSD+P+HNWTTGAGRDVVPLNVTR YYF+SGKGFCY GMK+A++VE  
Sbjct: 68  VLEVNETNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENP 127

Query: 571 PPPPSALPEK 600
           PPPPSA P K
Sbjct: 128 PPPPSASPIK 137


>ref|XP_002532906.1| Blue copper protein precursor, putative [Ricinus communis]
           gi|223527340|gb|EEF29486.1| Blue copper protein
           precursor, putative [Ricinus communis]
          Length = 183

 Score =  219 bits (557), Expect = 4e-55
 Identities = 105/155 (67%), Positives = 125/155 (80%), Gaps = 10/155 (6%)
 Frame = +1

Query: 175 MERLGISWRATVVVLTCAVMMMV-MLPEVSSTRFIVGGNMGWTSNVNYTIWVQDRHFYLD 351
           M + G  + + +V++  AV++MV M PEVS+TR+ VG NMGW +NVNYTIW +D+HFY  
Sbjct: 1   MMKRGCGFVSPLVMMVVAVVLMVAMAPEVSATRWTVGANMGWNTNVNYTIWAKDKHFYNG 60

Query: 352 DWL-------FFVYDRNQMNVLEVNKTNYETCNSDNPIHNWTTGAGRDVVPLNVTRNYYF 510
           DWL        FVYDRNQMNVLEVNKT+YETCNSD+P+HNWTTGAGRDVVPLNVTRNYYF
Sbjct: 61  DWLSHISLLPVFVYDRNQMNVLEVNKTDYETCNSDHPLHNWTTGAGRDVVPLNVTRNYYF 120

Query: 511 ISGKGFCYGGMKLAVHVEKLPPPPSALP--EKSHS 609
           ISGKGFC+GGMK+A+HVE  PPPP+A P  EKS S
Sbjct: 121 ISGKGFCFGGMKVAIHVENPPPPPTASPLNEKSAS 155


>emb|CBI22267.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  218 bits (554), Expect = 9e-55
 Identities = 95/126 (75%), Positives = 113/126 (89%)
 Frame = +1

Query: 223 CAVMMMVMLPEVSSTRFIVGGNMGWTSNVNYTIWVQDRHFYLDDWLFFVYDRNQMNVLEV 402
           CAV++M  LP+VS+TR+ VGGN GW++NVNYT+W +D+HFY  DWLFFVYDRNQMNVLEV
Sbjct: 2   CAVVLM--LPDVSATRWTVGGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEV 59

Query: 403 NKTNYETCNSDNPIHNWTTGAGRDVVPLNVTRNYYFISGKGFCYGGMKLAVHVEKLPPPP 582
           N+TNYE+CNSD+P+HNWTTGAGRDVVPLNVTR YYF+SGKGFCY GMK+A++VE  PPPP
Sbjct: 60  NETNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPP 119

Query: 583 SALPEK 600
           SA P K
Sbjct: 120 SASPIK 125


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