BLASTX nr result

ID: Panax21_contig00014289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014289
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19401.3| unnamed protein product [Vitis vinifera]              336   e-108
ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-...   336   e-107
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi...   332   e-106
ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-...   325   e-102
ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-...   317   e-101

>emb|CBI19401.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  336 bits (861), Expect(2) = e-108
 Identities = 160/193 (82%), Positives = 181/193 (93%), Gaps = 1/193 (0%)
 Frame = -1

Query: 841 MWKEVRERESGKLRPNLFTNRIKSNRIASLQLSNHKEIISPHRGSINSLQVDLTEGRYLL 662
           MWK++ +RE+GKLRP  F+NRI S+RIASLQLSN+KEI+SPHRG++NSLQVDLTEGRYLL
Sbjct: 1   MWKDLGDREAGKLRPYSFSNRITSDRIASLQLSNYKEIVSPHRGAVNSLQVDLTEGRYLL 60

Query: 661 SGGADASVAVYDVQRATEYVGGT-VAKHKSILVVDKQHEHGHKYAVSSAIWYPVDTGLFI 485
           SG +DAS AVYD+QRATEY GG+ VAKHKSI VVDKQHEHGHKYA+SSAIWYP+DTGLFI
Sbjct: 61  SGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAISSAIWYPIDTGLFI 120

Query: 484 TGSYDHYISVWDTNTIQAVMNFKMPGKVYRTAMSTLATSHMLIAAATEDVQVRLCDIASG 305
           TGSYDHYI+VWDTNT Q V+NFKMPGK+YRTAMS+LAT+HMLIAA TEDVQVRLCDIASG
Sbjct: 121 TGSYDHYINVWDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASG 180

Query: 304 AFSHTLSGHRDGV 266
           AF+HTLSGHRDGV
Sbjct: 181 AFAHTLSGHRDGV 193



 Score = 82.0 bits (201), Expect(2) = e-108
 Identities = 37/49 (75%), Positives = 42/49 (85%)
 Frame = -3

Query: 152 GGCDGAIRFWDIRRAGCFSVLNQSNTQLGRRPPLLQRASTNKVSTSKSF 6
           GGCDGAIRFWDIRRAGCF VL+QS +QLGRRPPLL+ ++ NK   SKSF
Sbjct: 209 GGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPLLECSTANKAPMSKSF 257


>ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-8-like [Vitis vinifera]
          Length = 450

 Score =  336 bits (861), Expect(2) = e-107
 Identities = 160/193 (82%), Positives = 181/193 (93%), Gaps = 1/193 (0%)
 Frame = -1

Query: 841 MWKEVRERESGKLRPNLFTNRIKSNRIASLQLSNHKEIISPHRGSINSLQVDLTEGRYLL 662
           MWK++ +RE+GKLRP  F+NRI S+RIASLQLSN+KEI+SPHRG++NSLQVDLTEGRYLL
Sbjct: 1   MWKDLGDREAGKLRPYSFSNRITSDRIASLQLSNYKEIVSPHRGAVNSLQVDLTEGRYLL 60

Query: 661 SGGADASVAVYDVQRATEYVGGT-VAKHKSILVVDKQHEHGHKYAVSSAIWYPVDTGLFI 485
           SG +DAS AVYD+QRATEY GG+ VAKHKSI VVDKQHEHGHKYA+SSAIWYP+DTGLFI
Sbjct: 61  SGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAISSAIWYPIDTGLFI 120

Query: 484 TGSYDHYISVWDTNTIQAVMNFKMPGKVYRTAMSTLATSHMLIAAATEDVQVRLCDIASG 305
           TGSYDHYI+VWDTNT Q V+NFKMPGK+YRTAMS+LAT+HMLIAA TEDVQVRLCDIASG
Sbjct: 121 TGSYDHYINVWDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASG 180

Query: 304 AFSHTLSGHRDGV 266
           AF+HTLSGHRDGV
Sbjct: 181 AFAHTLSGHRDGV 193



 Score = 79.0 bits (193), Expect(2) = e-107
 Identities = 36/47 (76%), Positives = 41/47 (87%)
 Frame = -3

Query: 152 GGCDGAIRFWDIRRAGCFSVLNQSNTQLGRRPPLLQRASTNKVSTSK 12
           GGCDGAIRFWDIRRAGCF VL+QS +QLGRRPPLL+ ++ NKVS  K
Sbjct: 209 GGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPLLECSTANKVSFLK 255


>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 479

 Score =  332 bits (852), Expect(2) = e-106
 Identities = 158/202 (78%), Positives = 180/202 (89%), Gaps = 1/202 (0%)
 Frame = -1

Query: 868 CVLDEDARRMWKEVRERESGKLRPNLFTNRIKSNRIASLQLSNHKEIISPHRGSINSLQV 689
           C   +DA +MW+E+R+RESGK RPN FTNR+KSNRIA+LQLSN+KEI+SPHRG+INSLQV
Sbjct: 24  CFEAKDASKMWREIRDRESGKTRPNSFTNRVKSNRIANLQLSNYKEIVSPHRGAINSLQV 83

Query: 688 DLTEGRYLLSGGADASVAVYDVQRATEYVG-GTVAKHKSILVVDKQHEHGHKYAVSSAIW 512
           DLTEGRYL+SG +DAS AV+DVQRAT++   G +AKHK + +VDKQHE  HKYAVSSA W
Sbjct: 84  DLTEGRYLISGASDASAAVFDVQRATDFEDEGVIAKHKCLFIVDKQHETAHKYAVSSATW 143

Query: 511 YPVDTGLFITGSYDHYISVWDTNTIQAVMNFKMPGKVYRTAMSTLATSHMLIAAATEDVQ 332
           YPVDTGLF+TGSYDHYI VWDTNT Q V+NFK+PGKVYRTAMS LATSHMLIAA TEDVQ
Sbjct: 144 YPVDTGLFVTGSYDHYIKVWDTNTTQVVVNFKLPGKVYRTAMSPLATSHMLIAAGTEDVQ 203

Query: 331 VRLCDIASGAFSHTLSGHRDGV 266
           VRLCDIASGAF+HTLSGHRDGV
Sbjct: 204 VRLCDIASGAFAHTLSGHRDGV 225



 Score = 79.0 bits (193), Expect(2) = e-106
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = -3

Query: 152 GGCDGAIRFWDIRRAGCFSVLNQSNTQLGRRPPLLQRASTNKVST 18
           GGCDGAIRFWDIRRAGCF VL+QS +QLGRRPP+L R+  NKVS+
Sbjct: 241 GGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPVLPRSVANKVSS 285


>ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-8-like [Cucumis
           sativus] gi|449482714|ref|XP_004156381.1| PREDICTED: DNA
           excision repair protein ERCC-8-like [Cucumis sativus]
          Length = 446

 Score =  325 bits (832), Expect(2) = e-102
 Identities = 152/192 (79%), Positives = 176/192 (91%)
 Frame = -1

Query: 841 MWKEVRERESGKLRPNLFTNRIKSNRIASLQLSNHKEIISPHRGSINSLQVDLTEGRYLL 662
           MWK +R+RE+GKLRPN F NR+KS+R +SLQLSNHK+I+SPHRGS+NSLQVDLTEGRYLL
Sbjct: 1   MWKNIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 661 SGGADASVAVYDVQRATEYVGGTVAKHKSILVVDKQHEHGHKYAVSSAIWYPVDTGLFIT 482
           SG +DAS AV+D+QRAT +  G +AKH+ I  VDKQHEHGHKYA+SSAIWYPVDTGLF+T
Sbjct: 61  SGASDASAAVFDIQRAT-HSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVT 119

Query: 481 GSYDHYISVWDTNTIQAVMNFKMPGKVYRTAMSTLATSHMLIAAATEDVQVRLCDIASGA 302
           GS+DH+I+VWDTNT Q V+NFK+PGKVYRTAMS+LATSHMLIAA TEDVQVRLCDI+SGA
Sbjct: 120 GSFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGA 179

Query: 301 FSHTLSGHRDGV 266
           FSHTLSGHRDGV
Sbjct: 180 FSHTLSGHRDGV 191



 Score = 75.9 bits (185), Expect(2) = e-102
 Identities = 36/48 (75%), Positives = 41/48 (85%)
 Frame = -3

Query: 152 GGCDGAIRFWDIRRAGCFSVLNQSNTQLGRRPPLLQRASTNKVSTSKS 9
           GGCDGAIRFWDIRRAGCF VL+QS +QLGRRPP +   + NK+STSKS
Sbjct: 207 GGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPP-ISGWTANKLSTSKS 253


>ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-8-like [Glycine max]
          Length = 460

 Score =  317 bits (812), Expect(2) = e-101
 Identities = 152/199 (76%), Positives = 174/199 (87%), Gaps = 5/199 (2%)
 Frame = -1

Query: 847 RRMWKEVRERESGKLRPNLFTNRIKSNRIASLQLSNHKEIISPHRGSINSLQVDLTEGRY 668
           R +WK +R+RE+GKLR N F NRIKSNRI+ LQLSNHK+I+SPH+G+INSLQVD TEGRY
Sbjct: 7   RHVWKRIRDREAGKLRANHFANRIKSNRISQLQLSNHKDIVSPHKGAINSLQVDSTEGRY 66

Query: 667 LLSGGADASVAVYDVQRATEYV-----GGTVAKHKSILVVDKQHEHGHKYAVSSAIWYPV 503
           LLS  +DASVAVYDVQR T Y      GG ++KH SI VVDKQH+ GHKYAVS+AIWYP+
Sbjct: 67  LLSAASDASVAVYDVQRPTVYEAGGGGGGGISKHSSIFVVDKQHQQGHKYAVSTAIWYPI 126

Query: 502 DTGLFITGSYDHYISVWDTNTIQAVMNFKMPGKVYRTAMSTLATSHMLIAAATEDVQVRL 323
           DTGLF+TGSYDH+I+VWDTNT Q V+NFKMPGKV+R AMS L+TSHMLIAAATEDVQVRL
Sbjct: 127 DTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRAAMSNLSTSHMLIAAATEDVQVRL 186

Query: 322 CDIASGAFSHTLSGHRDGV 266
           CDIASGAF+HTLSGHRDGV
Sbjct: 187 CDIASGAFAHTLSGHRDGV 205



 Score = 78.6 bits (192), Expect(2) = e-101
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = -3

Query: 152 GGCDGAIRFWDIRRAGCFSVLNQSNTQLGRRPPLLQRASTNKVSTSKSF 6
           GGCDGAIRFWDIRRAGCF VL+QS TQLGRRPP+L+R+   KV +   +
Sbjct: 221 GGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMITKVKSQSLY 269


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