BLASTX nr result

ID: Panax21_contig00014250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014250
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554755.1| PREDICTED: tubulin gamma-1 chain-like [Glyci...    60   6e-17
ref|NP_001241938.1| uncharacterized protein LOC100775439 [Glycin...    60   6e-17
ref|XP_001779843.1| gamma tubulin [Physcomitrella patens subsp. ...    61   8e-17
ref|XP_001778184.1| gamma tubulin [Physcomitrella patens subsp. ...    61   8e-17
ref|XP_002968663.1| hypothetical protein SELMODRAFT_170122 [Sela...    61   8e-17

>ref|XP_003554755.1| PREDICTED: tubulin gamma-1 chain-like [Glycine max]
          Length = 474

 Score = 59.7 bits (143), Expect(2) = 6e-17
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21
           LNADCVVVLDNTALNRIAVERLH+ NPS +QT
Sbjct: 197 LNADCVVVLDNTALNRIAVERLHLSNPSFAQT 228



 Score = 52.8 bits (125), Expect(2) = 6e-17
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -3

Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124
           SGMGSYLLETLNDRYSKKLVQTYSV
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSV 171


>ref|NP_001241938.1| uncharacterized protein LOC100775439 [Glycine max]
           gi|255635554|gb|ACU18127.1| unknown [Glycine max]
          Length = 474

 Score = 59.7 bits (143), Expect(2) = 6e-17
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21
           LNADCVVVLDNTALNRIAVERLH+ NPS +QT
Sbjct: 197 LNADCVVVLDNTALNRIAVERLHLSNPSFAQT 228



 Score = 52.8 bits (125), Expect(2) = 6e-17
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -3

Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124
           SGMGSYLLETLNDRYSKKLVQTYSV
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSV 171


>ref|XP_001779843.1| gamma tubulin [Physcomitrella patens subsp. patens]
           gi|162668755|gb|EDQ55356.1| gamma tubulin
           [Physcomitrella patens subsp. patens]
          Length = 486

 Score = 61.2 bits (147), Expect(2) = 8e-17
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -1

Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21
           LNADCVVVLDNTALNRIAV+RLHIPNP+ +QT
Sbjct: 197 LNADCVVVLDNTALNRIAVDRLHIPNPTFAQT 228



 Score = 50.8 bits (120), Expect(2) = 8e-17
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = -3

Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124
           SGMGSYLLE LNDRYSKKLVQTYSV
Sbjct: 147 SGMGSYLLEALNDRYSKKLVQTYSV 171


>ref|XP_001778184.1| gamma tubulin [Physcomitrella patens subsp. patens]
           gi|8928437|sp|Q9XFG3.1|TBG_PHYPA RecName: Full=Tubulin
           gamma chain; AltName: Full=Gamma-tubulin
           gi|4929162|gb|AAD33883.1|AF142098_1 gamma tubulin
           [Physcomitrella patens] gi|162670397|gb|EDQ56966.1|
           gamma tubulin [Physcomitrella patens subsp. patens]
          Length = 475

 Score = 61.2 bits (147), Expect(2) = 8e-17
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -1

Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21
           LNADCVVVLDNTALNRIAV+RLHIPNP+ +QT
Sbjct: 197 LNADCVVVLDNTALNRIAVDRLHIPNPTFAQT 228



 Score = 50.8 bits (120), Expect(2) = 8e-17
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = -3

Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124
           SGMGSYLLE LNDRYSKKLVQTYSV
Sbjct: 147 SGMGSYLLEALNDRYSKKLVQTYSV 171


>ref|XP_002968663.1| hypothetical protein SELMODRAFT_170122 [Selaginella moellendorffii]
           gi|302816467|ref|XP_002989912.1| hypothetical protein
           SELMODRAFT_130857 [Selaginella moellendorffii]
           gi|300142223|gb|EFJ08925.1| hypothetical protein
           SELMODRAFT_130857 [Selaginella moellendorffii]
           gi|300163168|gb|EFJ29779.1| hypothetical protein
           SELMODRAFT_170122 [Selaginella moellendorffii]
          Length = 475

 Score = 61.2 bits (147), Expect(2) = 8e-17
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -1

Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21
           LNADCVVVLDNTALNRIAV+RLHIPNP+ +QT
Sbjct: 197 LNADCVVVLDNTALNRIAVDRLHIPNPTFAQT 228



 Score = 50.8 bits (120), Expect(2) = 8e-17
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = -3

Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124
           SGMGSYLLE LNDRYSKKLVQTYSV
Sbjct: 147 SGMGSYLLEALNDRYSKKLVQTYSV 171


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