BLASTX nr result
ID: Panax21_contig00014250
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014250 (554 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003554755.1| PREDICTED: tubulin gamma-1 chain-like [Glyci... 60 6e-17 ref|NP_001241938.1| uncharacterized protein LOC100775439 [Glycin... 60 6e-17 ref|XP_001779843.1| gamma tubulin [Physcomitrella patens subsp. ... 61 8e-17 ref|XP_001778184.1| gamma tubulin [Physcomitrella patens subsp. ... 61 8e-17 ref|XP_002968663.1| hypothetical protein SELMODRAFT_170122 [Sela... 61 8e-17 >ref|XP_003554755.1| PREDICTED: tubulin gamma-1 chain-like [Glycine max] Length = 474 Score = 59.7 bits (143), Expect(2) = 6e-17 Identities = 28/32 (87%), Positives = 30/32 (93%) Frame = -1 Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21 LNADCVVVLDNTALNRIAVERLH+ NPS +QT Sbjct: 197 LNADCVVVLDNTALNRIAVERLHLSNPSFAQT 228 Score = 52.8 bits (125), Expect(2) = 6e-17 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124 SGMGSYLLETLNDRYSKKLVQTYSV Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSV 171 >ref|NP_001241938.1| uncharacterized protein LOC100775439 [Glycine max] gi|255635554|gb|ACU18127.1| unknown [Glycine max] Length = 474 Score = 59.7 bits (143), Expect(2) = 6e-17 Identities = 28/32 (87%), Positives = 30/32 (93%) Frame = -1 Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21 LNADCVVVLDNTALNRIAVERLH+ NPS +QT Sbjct: 197 LNADCVVVLDNTALNRIAVERLHLSNPSFAQT 228 Score = 52.8 bits (125), Expect(2) = 6e-17 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124 SGMGSYLLETLNDRYSKKLVQTYSV Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSV 171 >ref|XP_001779843.1| gamma tubulin [Physcomitrella patens subsp. patens] gi|162668755|gb|EDQ55356.1| gamma tubulin [Physcomitrella patens subsp. patens] Length = 486 Score = 61.2 bits (147), Expect(2) = 8e-17 Identities = 28/32 (87%), Positives = 31/32 (96%) Frame = -1 Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21 LNADCVVVLDNTALNRIAV+RLHIPNP+ +QT Sbjct: 197 LNADCVVVLDNTALNRIAVDRLHIPNPTFAQT 228 Score = 50.8 bits (120), Expect(2) = 8e-17 Identities = 24/25 (96%), Positives = 24/25 (96%) Frame = -3 Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124 SGMGSYLLE LNDRYSKKLVQTYSV Sbjct: 147 SGMGSYLLEALNDRYSKKLVQTYSV 171 >ref|XP_001778184.1| gamma tubulin [Physcomitrella patens subsp. patens] gi|8928437|sp|Q9XFG3.1|TBG_PHYPA RecName: Full=Tubulin gamma chain; AltName: Full=Gamma-tubulin gi|4929162|gb|AAD33883.1|AF142098_1 gamma tubulin [Physcomitrella patens] gi|162670397|gb|EDQ56966.1| gamma tubulin [Physcomitrella patens subsp. patens] Length = 475 Score = 61.2 bits (147), Expect(2) = 8e-17 Identities = 28/32 (87%), Positives = 31/32 (96%) Frame = -1 Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21 LNADCVVVLDNTALNRIAV+RLHIPNP+ +QT Sbjct: 197 LNADCVVVLDNTALNRIAVDRLHIPNPTFAQT 228 Score = 50.8 bits (120), Expect(2) = 8e-17 Identities = 24/25 (96%), Positives = 24/25 (96%) Frame = -3 Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124 SGMGSYLLE LNDRYSKKLVQTYSV Sbjct: 147 SGMGSYLLEALNDRYSKKLVQTYSV 171 >ref|XP_002968663.1| hypothetical protein SELMODRAFT_170122 [Selaginella moellendorffii] gi|302816467|ref|XP_002989912.1| hypothetical protein SELMODRAFT_130857 [Selaginella moellendorffii] gi|300142223|gb|EFJ08925.1| hypothetical protein SELMODRAFT_130857 [Selaginella moellendorffii] gi|300163168|gb|EFJ29779.1| hypothetical protein SELMODRAFT_170122 [Selaginella moellendorffii] Length = 475 Score = 61.2 bits (147), Expect(2) = 8e-17 Identities = 28/32 (87%), Positives = 31/32 (96%) Frame = -1 Query: 116 LNADCVVVLDNTALNRIAVERLHIPNPSVSQT 21 LNADCVVVLDNTALNRIAV+RLHIPNP+ +QT Sbjct: 197 LNADCVVVLDNTALNRIAVDRLHIPNPTFAQT 228 Score = 50.8 bits (120), Expect(2) = 8e-17 Identities = 24/25 (96%), Positives = 24/25 (96%) Frame = -3 Query: 198 SGMGSYLLETLNDRYSKKLVQTYSV 124 SGMGSYLLE LNDRYSKKLVQTYSV Sbjct: 147 SGMGSYLLEALNDRYSKKLVQTYSV 171