BLASTX nr result

ID: Panax21_contig00014244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014244
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleo...   152   3e-35
ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|2...   151   8e-35
gb|ABK93558.1| unknown [Populus trichocarpa]                          150   1e-34
ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleo...   150   2e-34
ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago ...   149   3e-34

>ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
           vinifera] gi|297740131|emb|CBI30313.3| unnamed protein
           product [Vitis vinifera]
          Length = 80

 Score =  152 bits (385), Expect = 3e-35
 Identities = 75/80 (93%), Positives = 79/80 (98%)
 Frame = +1

Query: 85  MSRSGQPPDLKKYMDKQLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGNERTDIGMV 264
           MSRSGQPPDLKKYMDK+LQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGNE+TDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 265 VIRGNSVVTVEALEPVSRAQ 324
           VIRGNSVVTVEALEPVSR Q
Sbjct: 61  VIRGNSVVTVEALEPVSRMQ 80


>ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|222854442|gb|EEE91989.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score =  151 bits (382), Expect = 8e-35
 Identities = 74/80 (92%), Positives = 80/80 (100%)
 Frame = +1

Query: 85  MSRSGQPPDLKKYMDKQLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGNERTDIGMV 264
           MSRSGQPPDLKKYMDK+LQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNG+E+TDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 265 VIRGNSVVTVEALEPVSRAQ 324
           VIRGNSVVTVEALEPV+RAQ
Sbjct: 61  VIRGNSVVTVEALEPVNRAQ 80


>gb|ABK93558.1| unknown [Populus trichocarpa]
          Length = 80

 Score =  150 bits (380), Expect = 1e-34
 Identities = 73/80 (91%), Positives = 80/80 (100%)
 Frame = +1

Query: 85  MSRSGQPPDLKKYMDKQLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGNERTDIGMV 264
           MSRSGQPPDLKKYMDK+LQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNG+E+TDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 265 VIRGNSVVTVEALEPVSRAQ 324
           V+RGNSVVTVEALEPV+RAQ
Sbjct: 61  VLRGNSVVTVEALEPVNRAQ 80


>ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Cucumis
           sativus] gi|449482341|ref|XP_004156252.1| PREDICTED:
           probable small nuclear ribonucleoprotein G-like [Cucumis
           sativus]
          Length = 80

 Score =  150 bits (378), Expect = 2e-34
 Identities = 72/80 (90%), Positives = 79/80 (98%)
 Frame = +1

Query: 85  MSRSGQPPDLKKYMDKQLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGNERTDIGMV 264
           MSRSGQPPDLKKYMDK+LQIK+NANR+V+GTLRGFDQFMNLV+DNTVEVNGNE+TDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRLVIGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 265 VIRGNSVVTVEALEPVSRAQ 324
           VIRGNSVVTVEALEPV+R Q
Sbjct: 61  VIRGNSVVTVEALEPVNRMQ 80


>ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
           gi|87240819|gb|ABD32677.1| Like-Sm
           ribonucleoprotein-related, core [Medicago truncatula]
           gi|355500861|gb|AES82064.1| hypothetical protein
           MTR_7g104930 [Medicago truncatula]
          Length = 80

 Score =  149 bits (377), Expect = 3e-34
 Identities = 72/79 (91%), Positives = 78/79 (98%)
 Frame = +1

Query: 85  MSRSGQPPDLKKYMDKQLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGNERTDIGMV 264
           MSRSGQPPDLKKYMDKQLQIK+NANRM+VGTLRGFDQFMNLV+DNTVEVNGNE+ DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 265 VIRGNSVVTVEALEPVSRA 321
           VIRGNSVVTVEALEPV+R+
Sbjct: 61  VIRGNSVVTVEALEPVNRS 79


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