BLASTX nr result

ID: Panax21_contig00014234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014234
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   658   0.0  
emb|CAN71460.1| hypothetical protein VITISV_033508 [Vitis vinifera]   658   0.0  
ref|XP_002316148.1| predicted protein [Populus trichocarpa] gi|2...   650   0.0  
ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu...   648   0.0  
ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   635   e-180

>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  658 bits (1698), Expect = 0.0
 Identities = 324/407 (79%), Positives = 335/407 (82%)
 Frame = +1

Query: 1    YVIDTGYGKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYQNEL 180
            YVIDTGYGKMKVYNPRMGMDALQVFPVS                  CYRLYTESAY NEL
Sbjct: 883  YVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEL 942

Query: 181  LPSPVPEIQRTXXXXXXXXXXXXXXXXXXXFDFMDPPPQDNILNSMYQLWVLGALNNVGN 360
            L SPVPEIQRT                   FDFMDPPPQDNILNSMYQLWVLGALNNVG 
Sbjct: 943  LASPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGG 1002

Query: 361  LTDLGWKMVEFPLDPPLAKMLLIGEQLECLNEVLTVVSMLSVPSVFFRPKDRAEESDAAR 540
            LT+LGWKMVEFPLDPPLAKMLLIGEQLEC+NEVLT+VSMLSVPSVFFRPKDRAEESDAAR
Sbjct: 1003 LTELGWKMVEFPLDPPLAKMLLIGEQLECINEVLTIVSMLSVPSVFFRPKDRAEESDAAR 1062

Query: 541  EKFFVPESDHLTLLNVYQQWKANNYNGEWCNDHFLHSKGLKKAREVRSQLLDILKTLKIP 720
            EKFFVPESDHLTLLNVYQQWKAN Y G+WCNDHFLH KGL+KAREVRSQLLDILKTLKIP
Sbjct: 1063 EKFFVPESDHLTLLNVYQQWKANQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIP 1122

Query: 721  LTSCGPDWDIVRKAICSAYFHNAARLKGIGEYVNCRNGMPCHLHPSSALYGLGYTPDYVV 900
            LTSCGPDWD+VRKAICSAYFHNAARLKG+GEYVNCRNGMPCHLHPSSALYGLGYTPDYVV
Sbjct: 1123 LTSCGPDWDVVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVV 1182

Query: 901  YHELILTTKEYMQCATSVEPQWLAELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1080
            YHELILT KEYMQCAT+VEPQWLAELGPMFFSVKDSDTSMLEHKK+QKE K+AMEEEMEN
Sbjct: 1183 YHELILTAKEYMQCATAVEPQWLAELGPMFFSVKDSDTSMLEHKKRQKEEKSAMEEEMEN 1242

Query: 1081 LRKVQXXXXXXXXXXXXXXXXXXXXXXSMPGGRQAPSTYLRPKRFGL 1221
            LRK Q                      SMPG RQ  STYLRPK+ GL
Sbjct: 1243 LRKEQEEAERKSKEKERKKRAKQQQQVSMPGLRQGSSTYLRPKKMGL 1289


>emb|CAN71460.1| hypothetical protein VITISV_033508 [Vitis vinifera]
          Length = 855

 Score =  658 bits (1698), Expect = 0.0
 Identities = 324/407 (79%), Positives = 335/407 (82%)
 Frame = +1

Query: 1    YVIDTGYGKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYQNEL 180
            YVIDTGYGKMKVYNPRMGMDALQVFPVS                  CYRLYTESAY NEL
Sbjct: 449  YVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEL 508

Query: 181  LPSPVPEIQRTXXXXXXXXXXXXXXXXXXXFDFMDPPPQDNILNSMYQLWVLGALNNVGN 360
            L SPVPEIQRT                   FDFMDPPPQDNILNSMYQLWVLGALNNVG 
Sbjct: 509  LASPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGG 568

Query: 361  LTDLGWKMVEFPLDPPLAKMLLIGEQLECLNEVLTVVSMLSVPSVFFRPKDRAEESDAAR 540
            LT+LGWKMVEFPLDPPLAKMLLIGEQLEC+NEVLT+VSMLSVPSVFFRPKDRAEESDAAR
Sbjct: 569  LTELGWKMVEFPLDPPLAKMLLIGEQLECINEVLTIVSMLSVPSVFFRPKDRAEESDAAR 628

Query: 541  EKFFVPESDHLTLLNVYQQWKANNYNGEWCNDHFLHSKGLKKAREVRSQLLDILKTLKIP 720
            EKFFVPESDHLTLLNVYQQWKAN Y G+WCNDHFLH KGL+KAREVRSQLLDILKTLKIP
Sbjct: 629  EKFFVPESDHLTLLNVYQQWKANQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIP 688

Query: 721  LTSCGPDWDIVRKAICSAYFHNAARLKGIGEYVNCRNGMPCHLHPSSALYGLGYTPDYVV 900
            LTSCGPDWD+VRKAICSAYFHNAARLKG+GEYVNCRNGMPCHLHPSSALYGLGYTPDYVV
Sbjct: 689  LTSCGPDWDVVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVV 748

Query: 901  YHELILTTKEYMQCATSVEPQWLAELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1080
            YHELILT KEYMQCAT+VEPQWLAELGPMFFSVKDSDTSMLEHKK+QKE K+AMEEEMEN
Sbjct: 749  YHELILTAKEYMQCATAVEPQWLAELGPMFFSVKDSDTSMLEHKKRQKEEKSAMEEEMEN 808

Query: 1081 LRKVQXXXXXXXXXXXXXXXXXXXXXXSMPGGRQAPSTYLRPKRFGL 1221
            LRK Q                      SMPG RQ  STYLRPK+ GL
Sbjct: 809  LRKEQEEAERKSKEKERKKRAKQQQQVSMPGLRQGSSTYLRPKKMGL 855


>ref|XP_002316148.1| predicted protein [Populus trichocarpa] gi|222865188|gb|EEF02319.1|
            predicted protein [Populus trichocarpa]
          Length = 499

 Score =  650 bits (1676), Expect = 0.0
 Identities = 319/407 (78%), Positives = 334/407 (82%)
 Frame = +1

Query: 1    YVIDTGYGKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYQNEL 180
            YVIDTGYGKMKVYNP+MGMDALQVFPVS                  CYRLYTESAY NE+
Sbjct: 93   YVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEM 152

Query: 181  LPSPVPEIQRTXXXXXXXXXXXXXXXXXXXFDFMDPPPQDNILNSMYQLWVLGALNNVGN 360
            LPSPVPEIQRT                   FDFMDPPPQDNILNSMYQLWVLGALNNVG 
Sbjct: 153  LPSPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGA 212

Query: 361  LTDLGWKMVEFPLDPPLAKMLLIGEQLECLNEVLTVVSMLSVPSVFFRPKDRAEESDAAR 540
            LTDLGWKMVEFPLDPPLAKMLLIGEQL C+NEVLT+VSMLSVPSVFFRPKDR EESDAAR
Sbjct: 213  LTDLGWKMVEFPLDPPLAKMLLIGEQLGCINEVLTIVSMLSVPSVFFRPKDRVEESDAAR 272

Query: 541  EKFFVPESDHLTLLNVYQQWKANNYNGEWCNDHFLHSKGLKKAREVRSQLLDILKTLKIP 720
            EKFFVPESDHLTLLNVY QWK + Y G+WCNDHFLH KGL+KAREVRSQLLDILKTLKIP
Sbjct: 273  EKFFVPESDHLTLLNVYLQWKEHQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIP 332

Query: 721  LTSCGPDWDIVRKAICSAYFHNAARLKGIGEYVNCRNGMPCHLHPSSALYGLGYTPDYVV 900
            LTSCG DWD+VRKAICSAYFHN+ARLKG+GEYVNCRNGMPCHLHPSSALYGLGYTPDYVV
Sbjct: 333  LTSCGYDWDVVRKAICSAYFHNSARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVV 392

Query: 901  YHELILTTKEYMQCATSVEPQWLAELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1080
            YHELILTTKEYMQCAT+VEPQWLAELGPMFFSVKDSDTSMLEHK+KQKE KTAMEEEMEN
Sbjct: 393  YHELILTTKEYMQCATAVEPQWLAELGPMFFSVKDSDTSMLEHKRKQKEEKTAMEEEMEN 452

Query: 1081 LRKVQXXXXXXXXXXXXXXXXXXXXXXSMPGGRQAPSTYLRPKRFGL 1221
            LRKVQ                      SMPG ++  STYLRPK+FGL
Sbjct: 453  LRKVQAETDRESKEKEREKRAKRQQQVSMPGLKKGSSTYLRPKKFGL 499


>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1269

 Score =  648 bits (1671), Expect = 0.0
 Identities = 318/407 (78%), Positives = 333/407 (81%)
 Frame = +1

Query: 1    YVIDTGYGKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYQNEL 180
            YVIDTGYGKMKVYNPRMGMDALQVFPVS                  CYRLYTESAY NE+
Sbjct: 863  YVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEM 922

Query: 181  LPSPVPEIQRTXXXXXXXXXXXXXXXXXXXFDFMDPPPQDNILNSMYQLWVLGALNNVGN 360
            LPSPVPEIQRT                   FDFMDPPPQDNILNSMYQLWVLGALNNVG 
Sbjct: 923  LPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGG 982

Query: 361  LTDLGWKMVEFPLDPPLAKMLLIGEQLECLNEVLTVVSMLSVPSVFFRPKDRAEESDAAR 540
            LTDLGWKMVEFPLDPPLAKMLL+GE+L CLNEVLT+VSMLSVPSVFFRPKDRAE+SDAAR
Sbjct: 983  LTDLGWKMVEFPLDPPLAKMLLMGEELGCLNEVLTIVSMLSVPSVFFRPKDRAEQSDAAR 1042

Query: 541  EKFFVPESDHLTLLNVYQQWKANNYNGEWCNDHFLHSKGLKKAREVRSQLLDILKTLKIP 720
            EKFFVPESDHLTLLNVY QWK + Y G+WCNDHFLH KGL+KAREVRSQLLDILKTLKIP
Sbjct: 1043 EKFFVPESDHLTLLNVYLQWKEHQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIP 1102

Query: 721  LTSCGPDWDIVRKAICSAYFHNAARLKGIGEYVNCRNGMPCHLHPSSALYGLGYTPDYVV 900
            LTSCG DWD++RKAICSAYFHNAARLKG+GEYVNCRNGMPCHLHPSSALYGLGYTP+YVV
Sbjct: 1103 LTSCGHDWDVIRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPEYVV 1162

Query: 901  YHELILTTKEYMQCATSVEPQWLAELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1080
            YHELILTTKEYMQCATSVEPQWLAELGPMFFSVK+SDTSMLEHKK+QKE KTAMEEEMEN
Sbjct: 1163 YHELILTTKEYMQCATSVEPQWLAELGPMFFSVKESDTSMLEHKKRQKEEKTAMEEEMEN 1222

Query: 1081 LRKVQXXXXXXXXXXXXXXXXXXXXXXSMPGGRQAPSTYLRPKRFGL 1221
            LRK Q                      S PG RQ  STYLRPK+FGL
Sbjct: 1223 LRKEQAEAERESKEREKQKRAKQQQQVSTPGLRQGSSTYLRPKKFGL 1269


>ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Glycine max]
          Length = 1272

 Score =  635 bits (1639), Expect = e-180
 Identities = 312/407 (76%), Positives = 333/407 (81%)
 Frame = +1

Query: 1    YVIDTGYGKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYQNEL 180
            YVID+GYGKMKVYNPRMGMDALQVFPVS                  CYRLYTESAY NE+
Sbjct: 866  YVIDSGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEM 925

Query: 181  LPSPVPEIQRTXXXXXXXXXXXXXXXXXXXFDFMDPPPQDNILNSMYQLWVLGALNNVGN 360
            LPSPVPEIQRT                   FDFMDPPPQDNILNSMYQLWVLGALNNVG 
Sbjct: 926  LPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGG 985

Query: 361  LTDLGWKMVEFPLDPPLAKMLLIGEQLECLNEVLTVVSMLSVPSVFFRPKDRAEESDAAR 540
            LTDLGWKMVEFPLDPPLAKMLL+GEQL CL EVLT+VSMLSVPSVFFRPKDRAEESDAAR
Sbjct: 986  LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAAR 1045

Query: 541  EKFFVPESDHLTLLNVYQQWKANNYNGEWCNDHFLHSKGLKKAREVRSQLLDILKTLKIP 720
            E+FFVPESDHLTL NVYQQWK ++Y G+WCNDHFLH KGL+KAREVRSQLLDILKTLKIP
Sbjct: 1046 ERFFVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIP 1105

Query: 721  LTSCGPDWDIVRKAICSAYFHNAARLKGIGEYVNCRNGMPCHLHPSSALYGLGYTPDYVV 900
            LTSC PD DIVRKAICSAYFHN+ARLKG+GEYVNCRNGMPCHLHPSSALYG+G TP+YVV
Sbjct: 1106 LTSCWPDTDIVRKAICSAYFHNSARLKGVGEYVNCRNGMPCHLHPSSALYGMGCTPEYVV 1165

Query: 901  YHELILTTKEYMQCATSVEPQWLAELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1080
            YHELILTTKEYMQCAT+VEPQWLAELGPMFFSVKDSDTS+LEHKK+QK+ KTAMEEEMEN
Sbjct: 1166 YHELILTTKEYMQCATAVEPQWLAELGPMFFSVKDSDTSLLEHKKRQKQEKTAMEEEMEN 1225

Query: 1081 LRKVQXXXXXXXXXXXXXXXXXXXXXXSMPGGRQAPSTYLRPKRFGL 1221
            L+KVQ                      SMPG R+  ST+LRPK+FGL
Sbjct: 1226 LKKVQAEVEKERKQKEKEKMAKHQQQISMPGLRKGSSTFLRPKKFGL 1272


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