BLASTX nr result

ID: Panax21_contig00014216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014216
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34587.3| unnamed protein product [Vitis vinifera]              205   2e-50
ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II tra...   205   2e-50
ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|2235327...   204   4e-50
ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|2...   200   6e-49
ref|XP_002303692.1| predicted protein [Populus trichocarpa] gi|2...   196   7e-48

>emb|CBI34587.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  205 bits (522), Expect = 2e-50
 Identities = 104/133 (78%), Positives = 112/133 (84%)
 Frame = +3

Query: 624  PKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEKCNI 803
            PKQNL+QVINSIQ TLG+LHQLYLTVSSFNVAS               D M KLSEKCNI
Sbjct: 130  PKQNLNQVINSIQKTLGLLHQLYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKCNI 189

Query: 804  QVPMEVLSLIDDGKNPDEFTREVLNSCITKNQITKGKADAFKGLRRHLLEELDQSFPDEV 983
            QVPMEVL+LID+GKNPDEFTR+VLNSCI KNQITKGK D+FKGLRRHLLEEL+Q+FPDEV
Sbjct: 190  QVPMEVLNLIDEGKNPDEFTRDVLNSCIAKNQITKGKTDSFKGLRRHLLEELEQAFPDEV 249

Query: 984  EFYREIRAASAAE 1022
            E YREIRAASAAE
Sbjct: 250  ESYREIRAASAAE 262


>ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II transcription subunit 10
            [Vitis vinifera]
          Length = 194

 Score =  205 bits (522), Expect = 2e-50
 Identities = 104/133 (78%), Positives = 112/133 (84%)
 Frame = +3

Query: 624  PKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEKCNI 803
            PKQNL+QVINSIQ TLG+LHQLYLTVSSFNVAS               D M KLSEKCNI
Sbjct: 40   PKQNLNQVINSIQKTLGLLHQLYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKCNI 99

Query: 804  QVPMEVLSLIDDGKNPDEFTREVLNSCITKNQITKGKADAFKGLRRHLLEELDQSFPDEV 983
            QVPMEVL+LID+GKNPDEFTR+VLNSCI KNQITKGK D+FKGLRRHLLEEL+Q+FPDEV
Sbjct: 100  QVPMEVLNLIDEGKNPDEFTRDVLNSCIAKNQITKGKTDSFKGLRRHLLEELEQAFPDEV 159

Query: 984  EFYREIRAASAAE 1022
            E YREIRAASAAE
Sbjct: 160  ESYREIRAASAAE 172


>ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|223532724|gb|EEF34504.1| nut2,
            putative [Ricinus communis]
          Length = 187

 Score =  204 bits (518), Expect = 4e-50
 Identities = 102/135 (75%), Positives = 112/135 (82%)
 Frame = +3

Query: 618  DYPKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEKC 797
            D PKQNL+ VINSIQ TLG+LHQLYLTVSSFN AS               DKMAKLSEKC
Sbjct: 31   DDPKQNLNNVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGLVLELDKMAKLSEKC 90

Query: 798  NIQVPMEVLSLIDDGKNPDEFTREVLNSCITKNQITKGKADAFKGLRRHLLEELDQSFPD 977
            NIQVP+EVL+LIDDGKNPDEFTR+V+NSCI KNQ+TKGK DAFKGLR+HLLEEL+Q+FPD
Sbjct: 91   NIQVPLEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKGLRKHLLEELEQAFPD 150

Query: 978  EVEFYREIRAASAAE 1022
            EVE YREIRA SAAE
Sbjct: 151  EVESYREIRAISAAE 165


>ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|222846685|gb|EEE84232.1|
            predicted protein [Populus trichocarpa]
          Length = 190

 Score =  200 bits (508), Expect = 6e-49
 Identities = 100/136 (73%), Positives = 111/136 (81%)
 Frame = +3

Query: 615  LDYPKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEK 794
            +D PKQNL+QVINSIQ TLG+LHQLYLTVSSFN AS               D M KLSEK
Sbjct: 33   VDDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGLVTELDNMVKLSEK 92

Query: 795  CNIQVPMEVLSLIDDGKNPDEFTREVLNSCITKNQITKGKADAFKGLRRHLLEELDQSFP 974
            CNIQVPMEVL+LIDDGKNPDEF+R+V+NSCI KNQ+TKGK DAFK LR+HLLEEL+Q+FP
Sbjct: 93   CNIQVPMEVLNLIDDGKNPDEFSRDVINSCIAKNQVTKGKTDAFKSLRKHLLEELEQTFP 152

Query: 975  DEVEFYREIRAASAAE 1022
            DEVE YREIRA SAAE
Sbjct: 153  DEVESYREIRAMSAAE 168


>ref|XP_002303692.1| predicted protein [Populus trichocarpa] gi|222841124|gb|EEE78671.1|
            predicted protein [Populus trichocarpa]
          Length = 185

 Score =  196 bits (499), Expect = 7e-48
 Identities = 99/136 (72%), Positives = 109/136 (80%)
 Frame = +3

Query: 615  LDYPKQNLDQVINSIQNTLGMLHQLYLTVSSFNVASXXXXXXXXXXXXXXXDKMAKLSEK 794
            +D PKQNL+QVI+SIQ TLG LHQLYLTVSSFN AS               D M KLSE+
Sbjct: 28   VDDPKQNLNQVIDSIQKTLGQLHQLYLTVSSFNTASQLPLLQRLNGLVTELDNMVKLSER 87

Query: 795  CNIQVPMEVLSLIDDGKNPDEFTREVLNSCITKNQITKGKADAFKGLRRHLLEELDQSFP 974
            CNIQVPMEVL+LIDDGKNPDEFTR V+NSCITKNQ+TKGK D FK LR+HLLEEL+Q+FP
Sbjct: 88   CNIQVPMEVLNLIDDGKNPDEFTRGVINSCITKNQVTKGKTDGFKSLRKHLLEELEQTFP 147

Query: 975  DEVEFYREIRAASAAE 1022
            DEVE YREIRA SAAE
Sbjct: 148  DEVESYREIRAMSAAE 163


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