BLASTX nr result

ID: Panax21_contig00014188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014188
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   216   1e-54
ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|2...   208   4e-52
ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|2...   202   4e-50
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   199   2e-49
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   199   3e-49

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  216 bits (551), Expect = 1e-54
 Identities = 115/200 (57%), Positives = 131/200 (65%), Gaps = 16/200 (8%)
 Frame = +1

Query: 1    QCLVHVVLVWLEYRRRNTRRVLDTEAYXXXXXXXXXXXXXX----------------RVG 132
            QCLVHVVLVW+EYRRRN+RRV D E                                R  
Sbjct: 707  QCLVHVVLVWIEYRRRNSRRVRDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRAS 766

Query: 133  VLGINNRSSFAKKCESANTMLSFLWWMIGFYWVVSGGEILLQSAPHLYWLTVVFLAFDVF 312
            V   +NRSS  K+CES NTM SFLWW++GFYWVVSGG+ LLQ+APHLYWL VVFLAFDVF
Sbjct: 767  VT--SNRSSVIKRCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVF 824

Query: 313  FAIFCVVXXXXXXXXXXXXXXXXXXXXYAVAGQEGASDADISILPKYRFQICTDEDKPTV 492
            FAIFCVV                    YAVAGQEGAS+AD+SILPKYRFQ+  +E+KP+V
Sbjct: 825  FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQLTVEEEKPSV 884

Query: 493  GAGRMVPIATSSGDLASERI 552
            GAG+MVPI TSSG LA+ERI
Sbjct: 885  GAGKMVPIETSSGYLANERI 904


>ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|222852284|gb|EEE89831.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  208 bits (530), Expect = 4e-52
 Identities = 107/185 (57%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   QCLVHVVLVWLEYRRRNTRRVLDTEAYXXXXXXXXXXXXXXRVGVLG-INNRSSFAKKCE 177
           QCLVHVVLVWLEYRRRNTRR  D E+                      I+ RSS  K+CE
Sbjct: 108 QCLVHVVLVWLEYRRRNTRRERDIESQQQSTEEENVPESDEEDDRASFISPRSSVTKRCE 167

Query: 178 SANTMLSFLWWMIGFYWVVSGGEILLQSAPHLYWLTVVFLAFDVFFAIFCVVXXXXXXXX 357
           S NTM+SFLWWM+GFYWVVSGG++LLQ+APHLYWL VVFLAFDVFFAIFCVV        
Sbjct: 168 SVNTMVSFLWWMVGFYWVVSGGDVLLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIA 227

Query: 358 XXXXXXXXXXXXYAVAGQEGASDADISILPKYRFQICTDEDKPTVGAGRMVPIATSSGDL 537
                       YAVAGQEGAS+AD+  LPKY+FQ+  +E+KP + AG+MVP+ TSS  L
Sbjct: 228 LCCCLPCIIAILYAVAGQEGASEADLIQLPKYKFQMIRNEEKPGIEAGKMVPVETSSRFL 287

Query: 538 ASERI 552
            +ERI
Sbjct: 288 GTERI 292


>ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|222863822|gb|EEF00953.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  202 bits (513), Expect = 4e-50
 Identities = 103/185 (55%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   QCLVHVVLVWLEYRRRNTRRVLDTEAYXXXXXXXXXXXXXXRVGVLGINNRSSFAKKCES 180
           QCLVHV+LVWLEYRRRNTRR  D E+                           F K+CES
Sbjct: 79  QCLVHVILVWLEYRRRNTRRGRDVES------------------------EQHFTKRCES 114

Query: 181 ANTMLSFLWWMIGFYWVVSGGEILLQSAPHLYWLTVVFLAFDVFFAIFCVVXXXXXXXXX 360
            NTM+SFLWW++GFYWVVSGG+ LLQ+AP LYWL VVFLAFDVFFAIFCVV         
Sbjct: 115 VNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 174

Query: 361 XXXXXXXXXXXYAVAGQEGASDADISILPKYRFQICTDEDK-PTVGAGRMVPIATSSGDL 537
                      YAVAGQEGAS+AD+SILPKY++ +  +E+K P VGAG+MVP+ TSSG L
Sbjct: 175 CCCLPCIIAILYAVAGQEGASEADLSILPKYKYLVMGNEEKRPRVGAGKMVPVETSSGYL 234

Query: 538 ASERI 552
           ++ER+
Sbjct: 235 STERV 239


>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 357

 Score =  199 bits (507), Expect = 2e-49
 Identities = 107/190 (56%), Positives = 124/190 (65%), Gaps = 7/190 (3%)
 Frame = +1

Query: 1   QCLVHVVLVWLEYRRRNTR-------RVLDTEAYXXXXXXXXXXXXXXRVGVLGINNRSS 159
           QCLVHV+LVWLEYRRR+ R       R  D E+                 G  G  +RS 
Sbjct: 110 QCLVHVLLVWLEYRRRSRRDSRSGSQRARDVESDAGSGDDDDYSDDGD--GSSGNTSRSR 167

Query: 160 FAKKCESANTMLSFLWWMIGFYWVVSGGEILLQSAPHLYWLTVVFLAFDVFFAIFCVVXX 339
           FAK+CES NT +SFLWW++GFYWVVSGG+ILLQ AP LYWL VVFLAFDVFFAIFCVV  
Sbjct: 168 FAKRCESLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLA 227

Query: 340 XXXXXXXXXXXXXXXXXXYAVAGQEGASDADISILPKYRFQICTDEDKPTVGAGRMVPIA 519
                             YAVAGQEGAS+AD+S+LPKY+F+I +D DKP+ GAG MVPI 
Sbjct: 228 CLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYKFRILSDVDKPSGGAGSMVPIE 287

Query: 520 TSSGDLASER 549
           TSS  L +ER
Sbjct: 288 TSSAYLENER 297


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  199 bits (505), Expect = 3e-49
 Identities = 107/188 (56%), Positives = 121/188 (64%), Gaps = 4/188 (2%)
 Frame = +1

Query: 1    QCLVHVVLVWLEYRRRNTRRVLDTEAYXXXXXXXXXXXXXX----RVGVLGINNRSSFAK 168
            QC VHVVLVWLEYRRRN RRV D E                         G  N+SS  K
Sbjct: 2054 QCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTK 2113

Query: 169  KCESANTMLSFLWWMIGFYWVVSGGEILLQSAPHLYWLTVVFLAFDVFFAIFCVVXXXXX 348
            +CES NTM SFLWW++GFYWVVSGGE LLQ+AP LYWL VVFLAFDVFFAIFCVV     
Sbjct: 2114 RCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLI 2173

Query: 349  XXXXXXXXXXXXXXXYAVAGQEGASDADISILPKYRFQICTDEDKPTVGAGRMVPIATSS 528
                           YAVAGQEGAS+AD+S+LP+YRF+   +E+K  VGAG M+P  TSS
Sbjct: 2174 GIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFE-ANNEEKSGVGAGTMIPTETSS 2232

Query: 529  GDLASERI 552
            G LA+ERI
Sbjct: 2233 GYLANERI 2240


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