BLASTX nr result

ID: Panax21_contig00014179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014179
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|1...   103   2e-23
ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis...   103   6e-23
ref|XP_002270173.1| PREDICTED: transcription elongation factor S...   100   7e-23
ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-22
ref|XP_004156922.1| PREDICTED: uncharacterized LOC101210450 [Cuc...   100   6e-22

>ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|118489920|gb|ABK96757.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864401|gb|EEF01532.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score =  103 bits (258), Expect(2) = 2e-23
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +1

Query: 97  FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243
           FRESG ENCPFFKMD+DHERVVDCTTPNFTG+ISVMDP+RSWAARWLRI
Sbjct: 31  FRESGCENCPFFKMDEDHERVVDCTTPNFTGIISVMDPSRSWAARWLRI 79



 Score = 30.4 bits (67), Expect(2) = 2e-23
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +3

Query: 9  AAQIPTSFEHELREC 53
          AAQIPTSF HELR C
Sbjct: 5  AAQIPTSFGHELRAC 19


>ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
           gi|223548167|gb|EEF49659.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 116

 Score =  103 bits (257), Expect(2) = 6e-23
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = +1

Query: 97  FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243
           FRESG ENCPFFKMD+DHERVVDCTTPNF G+ISVMDPTRSWAARWLRI
Sbjct: 31  FRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRI 79



 Score = 28.9 bits (63), Expect(2) = 6e-23
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 12 AQIPTSFEHELREC 53
          AQIPTSF HELR C
Sbjct: 6  AQIPTSFGHELRAC 19


>ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis
           vinifera] gi|297742714|emb|CBI35348.3| unnamed protein
           product [Vitis vinifera]
          Length = 114

 Score =  100 bits (250), Expect(2) = 7e-23
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = +1

Query: 97  FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243
           FRESG ENCPFFKMD+DHERVVDCTTPNF G+IS+MDP+RSWAARWLRI
Sbjct: 30  FRESGCENCPFFKMDEDHERVVDCTTPNFNGIISMMDPSRSWAARWLRI 78



 Score = 31.2 bits (69), Expect(2) = 7e-23
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +3

Query: 3  AHAAQIPTSFEHELREC 53
          ++AAQIPTSF HELR C
Sbjct: 2  SNAAQIPTSFGHELRAC 18


>ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|222850733|gb|EEE88280.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  100 bits (250), Expect(2) = 1e-22
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = +1

Query: 97  FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243
           FRESG ENC FFKMD+DHERVVDCTTPNFTG+ISVMDP+RSWAARWLRI
Sbjct: 31  FRESGCENCSFFKMDEDHERVVDCTTPNFTGIISVMDPSRSWAARWLRI 79



 Score = 30.4 bits (67), Expect(2) = 1e-22
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +3

Query: 9  AAQIPTSFEHELREC 53
          AAQIPTSF HELR C
Sbjct: 5  AAQIPTSFGHELRAC 19


>ref|XP_004156922.1| PREDICTED: uncharacterized LOC101210450 [Cucumis sativus]
          Length = 1093

 Score =  100 bits (248), Expect(2) = 6e-22
 Identities = 43/49 (87%), Positives = 46/49 (93%)
 Frame = +1

Query: 97  FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243
           FRESG ENCPFFKMD+DHERVV+CTTPNF G+ISVMDP RSWAARWLRI
Sbjct: 31  FRESGCENCPFFKMDEDHERVVECTTPNFNGIISVMDPARSWAARWLRI 79



 Score = 28.9 bits (63), Expect(2) = 6e-22
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 12 AQIPTSFEHELREC 53
          AQIPTSF HELR C
Sbjct: 6  AQIPTSFGHELRAC 19


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