BLASTX nr result
ID: Panax21_contig00014179
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014179 (380 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|1... 103 2e-23 ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis... 103 6e-23 ref|XP_002270173.1| PREDICTED: transcription elongation factor S... 100 7e-23 ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|2... 100 1e-22 ref|XP_004156922.1| PREDICTED: uncharacterized LOC101210450 [Cuc... 100 6e-22 >ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|118489920|gb|ABK96757.1| unknown [Populus trichocarpa x Populus deltoides] gi|222864401|gb|EEF01532.1| predicted protein [Populus trichocarpa] Length = 116 Score = 103 bits (258), Expect(2) = 2e-23 Identities = 45/49 (91%), Positives = 48/49 (97%) Frame = +1 Query: 97 FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243 FRESG ENCPFFKMD+DHERVVDCTTPNFTG+ISVMDP+RSWAARWLRI Sbjct: 31 FRESGCENCPFFKMDEDHERVVDCTTPNFTGIISVMDPSRSWAARWLRI 79 Score = 30.4 bits (67), Expect(2) = 2e-23 Identities = 13/15 (86%), Positives = 13/15 (86%) Frame = +3 Query: 9 AAQIPTSFEHELREC 53 AAQIPTSF HELR C Sbjct: 5 AAQIPTSFGHELRAC 19 >ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis] gi|223548167|gb|EEF49659.1| suppressor of ty, putative [Ricinus communis] Length = 116 Score = 103 bits (257), Expect(2) = 6e-23 Identities = 45/49 (91%), Positives = 47/49 (95%) Frame = +1 Query: 97 FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243 FRESG ENCPFFKMD+DHERVVDCTTPNF G+ISVMDPTRSWAARWLRI Sbjct: 31 FRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRI 79 Score = 28.9 bits (63), Expect(2) = 6e-23 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = +3 Query: 12 AQIPTSFEHELREC 53 AQIPTSF HELR C Sbjct: 6 AQIPTSFGHELRAC 19 >ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis vinifera] gi|297742714|emb|CBI35348.3| unnamed protein product [Vitis vinifera] Length = 114 Score = 100 bits (250), Expect(2) = 7e-23 Identities = 43/49 (87%), Positives = 47/49 (95%) Frame = +1 Query: 97 FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243 FRESG ENCPFFKMD+DHERVVDCTTPNF G+IS+MDP+RSWAARWLRI Sbjct: 30 FRESGCENCPFFKMDEDHERVVDCTTPNFNGIISMMDPSRSWAARWLRI 78 Score = 31.2 bits (69), Expect(2) = 7e-23 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +3 Query: 3 AHAAQIPTSFEHELREC 53 ++AAQIPTSF HELR C Sbjct: 2 SNAAQIPTSFGHELRAC 18 >ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|222850733|gb|EEE88280.1| predicted protein [Populus trichocarpa] Length = 116 Score = 100 bits (250), Expect(2) = 1e-22 Identities = 44/49 (89%), Positives = 47/49 (95%) Frame = +1 Query: 97 FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243 FRESG ENC FFKMD+DHERVVDCTTPNFTG+ISVMDP+RSWAARWLRI Sbjct: 31 FRESGCENCSFFKMDEDHERVVDCTTPNFTGIISVMDPSRSWAARWLRI 79 Score = 30.4 bits (67), Expect(2) = 1e-22 Identities = 13/15 (86%), Positives = 13/15 (86%) Frame = +3 Query: 9 AAQIPTSFEHELREC 53 AAQIPTSF HELR C Sbjct: 5 AAQIPTSFGHELRAC 19 >ref|XP_004156922.1| PREDICTED: uncharacterized LOC101210450 [Cucumis sativus] Length = 1093 Score = 100 bits (248), Expect(2) = 6e-22 Identities = 43/49 (87%), Positives = 46/49 (93%) Frame = +1 Query: 97 FRESGYENCPFFKMDQDHERVVDCTTPNFTGLISVMDPTRSWAARWLRI 243 FRESG ENCPFFKMD+DHERVV+CTTPNF G+ISVMDP RSWAARWLRI Sbjct: 31 FRESGCENCPFFKMDEDHERVVECTTPNFNGIISVMDPARSWAARWLRI 79 Score = 28.9 bits (63), Expect(2) = 6e-22 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = +3 Query: 12 AQIPTSFEHELREC 53 AQIPTSF HELR C Sbjct: 6 AQIPTSFGHELRAC 19