BLASTX nr result

ID: Panax21_contig00014178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014178
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519543.1| mahogunin, putative [Ricinus communis] gi|22...    66   3e-09
ref|XP_002326350.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein lig...    64   2e-08
ref|NP_001064306.1| Os10g0204100 [Oryza sativa Japonica Group] g...    64   2e-08
tpg|DAA44438.1| TPA: putative RING zinc finger domain superfamil...    64   2e-08

>ref|XP_002519543.1| mahogunin, putative [Ricinus communis] gi|223541406|gb|EEF42957.1|
           mahogunin, putative [Ricinus communis]
          Length = 306

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -1

Query: 388 CAKVLRFQTNRCPICRQPVERLLEIKVNNG 299
           CAKVLR+QTNRCPICRQPVERLLEIKVNNG
Sbjct: 274 CAKVLRYQTNRCPICRQPVERLLEIKVNNG 303


>ref|XP_002326350.1| predicted protein [Populus trichocarpa] gi|222833543|gb|EEE72020.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -1

Query: 388 CAKVLRFQTNRCPICRQPVERLLEIKVNNG 299
           CAKVLRFQTNRCPICRQPV+RLLEIKVNNG
Sbjct: 252 CAKVLRFQTNRCPICRQPVDRLLEIKVNNG 281


>ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
           sativus] gi|449513666|ref|XP_004164388.1| PREDICTED:
           probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
           sativus]
          Length = 368

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -1

Query: 388 CAKVLRFQTNRCPICRQPVERLLEIKVNNGTKD 290
           CAKVLRFQTNRCPICRQPV+RLLEI+V+NG ++
Sbjct: 335 CAKVLRFQTNRCPICRQPVDRLLEIRVSNGPEE 367


>ref|NP_001064306.1| Os10g0204100 [Oryza sativa Japonica Group]
           gi|19225030|gb|AAL86506.1|AC099040_10 putative
           hydroxyproline-rich glycoprotein [Oryza sativa Japonica
           Group] gi|20279471|gb|AAM18751.1|AC099325_7 unknown
           protein [Oryza sativa Japonica Group]
           gi|31430853|gb|AAP52712.1| RING zinc finger protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113638915|dbj|BAF26220.1| Os10g0204100 [Oryza sativa
           Japonica Group] gi|222612586|gb|EEE50718.1| hypothetical
           protein OsJ_31005 [Oryza sativa Japonica Group]
          Length = 425

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = -1

Query: 388 CAKVLRFQTNRCPICRQPVERLLEIKVNN 302
           CAKVLR+QTNRCPICRQPVERLLEIKVNN
Sbjct: 367 CAKVLRYQTNRCPICRQPVERLLEIKVNN 395


>tpg|DAA44438.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
           [Zea mays] gi|414865882|tpg|DAA44439.1| TPA: putative
           RING zinc finger domain superfamily protein isoform 2
           [Zea mays]
          Length = 400

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -1

Query: 388 CAKVLRFQTNRCPICRQPVERLLEIKVNNGTKD 290
           CAKVLR+QT RCPICRQPVERLLEIKVNN ++D
Sbjct: 348 CAKVLRYQTTRCPICRQPVERLLEIKVNNKSED 380


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