BLASTX nr result
ID: Panax21_contig00014155
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00014155
(2119 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi... 565 e-158
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera] 563 e-158
ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago tr... 485 e-134
ref|XP_002322279.1| chromatin remodeling complex subunit [Populu... 478 e-132
ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 463 e-128
>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
gi|297734457|emb|CBI15704.3| unnamed protein product
[Vitis vinifera]
Length = 563
Score = 565 bits (1456), Expect = e-158
Identities = 303/555 (54%), Positives = 382/555 (68%), Gaps = 11/555 (1%)
Frame = -2
Query: 1989 MESSQDPNFK-------ELDLYTIPSYSSWFSWHDIHQIERYSLKEFFDGTSITRTPKIY 1831
MES+ DP+ K ELDLYTIP +SSWFSW +IH+ E+ SLKEFFDG+SI+RTPKIY
Sbjct: 1 MESTPDPSSKLTRHDEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIY 60
Query: 1830 KEYRDFIISKYREEPSRRLTFTEIRKSLVGDLTLLYKVFLFLETWNLINFTAPKPEGDDD 1651
KEYRDFIISKYRE+PSRRLTF EIRKSLVGD++LL+KVFLFLE W LINF AP E
Sbjct: 61 KEYRDFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGAPGGEDSAA 120
Query: 1650 LVGEEDKWKIRVEEGAPHGVKVVANPNSLKPVSAPLVF--SNAASENGFKLPPLASYSDM 1477
+ ++ ++R E+GAP+G++VVA PNSLKP++ PL + ENGF+LPPLASYSD+
Sbjct: 121 VAEGAERHRVRSEDGAPNGIRVVAMPNSLKPITMPLTLDVNGEVDENGFRLPPLASYSDV 180
Query: 1476 YNELMQLNKLVCVNCKGSCDSGHYEYTKEKGIMICLKCFKNENYGENKSVEDFKFNDCTP 1297
+++L + LVC NC +CDSGHY K + IC+KCFKN NYGEN+SV+DFKFNDC
Sbjct: 181 FSDLTKEKGLVCGNCGDNCDSGHYNCLKGSPV-ICVKCFKNGNYGENRSVDDFKFNDCNE 239
Query: 1296 SNGNXXXXXXXXXXXXXXXXXLKHGDDWELVAQNVQTKIKLDCISKLIQMPFGELMLGSA 1117
+ GN LKHGDDWELV QNVQTK KLDCISKLI++PFGELMLGS+
Sbjct: 240 NRGNRGAVWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGELMLGSS 299
Query: 1116 NGKNRFWEANDRVISVKQVQLGSTESQETTITVNQLHELKNESQQNGDAEDLGPPQKRLC 937
GK+R +ND S+K VQ S ESQE Q E NES+QNGDAE+ GPP KR C
Sbjct: 300 LGKSR--ASNDNTSSIKPVQT-SLESQENIKNGGQGDEQINESEQNGDAENQGPPLKRKC 356
Query: 936 PAPVADASSSLMKRVARISMLVGSHVTXXXXXXXXXALCYENLCPREIFE-VNDNGSHEF 760
++DA SLM++VA IS +VG H++ ALC EN C ++IF+ DN + E
Sbjct: 357 ITSLSDAGISLMRQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGAEDNVTEEL 416
Query: 759 GYYPQNNEIERASLAKDSDMEERHTSGD-QETSSMKNNXXXXXXXXXXXXXXXXXXXXXX 583
G +NN++ER+ + +DS++ ER + Q+TSS KN
Sbjct: 417 GSPIRNNKLERSLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATALGAAAANA 476
Query: 582 XXXADQEDREIEHLVATIIEMQAKKLQCKMRYIGDLEMIMEKEYTQMEELEESVMSERMK 403
ADQE REIEHLVATIIE Q KKL CK+++ DLE+IMEKEYT ++EL+ES+++ER+
Sbjct: 477 KSLADQEHREIEHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELKESIIAERID 536
Query: 402 VLQKIFGAGISRWRD 358
+LQ++F AGISRWRD
Sbjct: 537 ILQRVFNAGISRWRD 551
>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
Length = 563
Score = 563 bits (1451), Expect = e-158
Identities = 303/555 (54%), Positives = 380/555 (68%), Gaps = 11/555 (1%)
Frame = -2
Query: 1989 MESSQDPNFK-------ELDLYTIPSYSSWFSWHDIHQIERYSLKEFFDGTSITRTPKIY 1831
MES+ DP+ K ELDLYTIP +SSWFSW +IH+ E+ SLKEFFDG+SI+RTPKIY
Sbjct: 1 MESTPDPSSKLTRHDEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIY 60
Query: 1830 KEYRDFIISKYREEPSRRLTFTEIRKSLVGDLTLLYKVFLFLETWNLINFTAPKPEGDDD 1651
KEYRDFIISKYRE+PSRRLTF EIRKSLVGD++LL+KVFLFLE W LINF AP E
Sbjct: 61 KEYRDFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGAPGGEDSAA 120
Query: 1650 LVGEEDKWKIRVEEGAPHGVKVVANPNSLKPVSAPLVF--SNAASENGFKLPPLASYSDM 1477
+ ++ ++R E+GAP+G++VVA PNSLKP++ PL + ENGF+LPPLASYSD+
Sbjct: 121 VAEGAERHRVRSEDGAPNGIRVVAMPNSLKPITMPLTLDVNGEVDENGFRLPPLASYSDV 180
Query: 1476 YNELMQLNKLVCVNCKGSCDSGHYEYTKEKGIMICLKCFKNENYGENKSVEDFKFNDCTP 1297
+++L + LVC NC +CDSGHY K + IC+KCFKN NYGEN+SV+DFKFNDC
Sbjct: 181 FSDLTKEKGLVCGNCGDNCDSGHYNCLKGSPV-ICVKCFKNGNYGENRSVDDFKFNDCNE 239
Query: 1296 SNGNXXXXXXXXXXXXXXXXXLKHGDDWELVAQNVQTKIKLDCISKLIQMPFGELMLGSA 1117
+ GN LKHGDDWELV QNVQTK KLDCISKLI++PFGELMLGS+
Sbjct: 240 NRGNRGAVWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGELMLGSS 299
Query: 1116 NGKNRFWEANDRVISVKQVQLGSTESQETTITVNQLHELKNESQQNGDAEDLGPPQKRLC 937
GK+R +ND S+K VQ S ESQE Q E NES+QNGDAE+ GPP KR C
Sbjct: 300 LGKSR--ASNDNTSSIKPVQT-SLESQENIKNGGQGDEQINESEQNGDAENQGPPLKRKC 356
Query: 936 PAPVADASSSLMKRVARISMLVGSHVTXXXXXXXXXALCYENLCPREIFE-VNDNGSHEF 760
++DA SLM +VA IS +VG H++ ALC EN C ++IF+ DN + E
Sbjct: 357 ITSLSDAGISLMXQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGAEDNVTEEL 416
Query: 759 GYYPQNNEIERASLAKDSDMEERHTSGD-QETSSMKNNXXXXXXXXXXXXXXXXXXXXXX 583
G +NN +ER+ + +DS++ ER + Q+TSS KN
Sbjct: 417 GSPIRNNXLERSLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATALGAAAANA 476
Query: 582 XXXADQEDREIEHLVATIIEMQAKKLQCKMRYIGDLEMIMEKEYTQMEELEESVMSERMK 403
ADQE REIEHLVATIIE Q KKL CK+++ DLE+IMEKEYT ++EL+ES+++ER+
Sbjct: 477 KSLADQEHREIEHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELKESIIAERID 536
Query: 402 VLQKIFGAGISRWRD 358
+LQ++F AGISRWRD
Sbjct: 537 ILQRVFNAGISRWRD 551
>ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
gi|355491835|gb|AES73038.1| SWI/SNF complex subunit
SMARCC2 [Medicago truncatula]
Length = 540
Score = 485 bits (1249), Expect = e-134
Identities = 268/553 (48%), Positives = 361/553 (65%), Gaps = 8/553 (1%)
Frame = -2
Query: 1989 MESSQDP-NFKELDLYTIPSYSSWFSWHDIHQIERYSLKEFFDGTSITRTPKIYKEYRDF 1813
ME S+DP + EL+LYTIPS S WF+W +IH+ E+ + KE+FDGTSITRTPKIYKEYRDF
Sbjct: 1 MEGSKDPISDSELELYTIPSSSKWFAWDEIHETEKTAFKEYFDGTSITRTPKIYKEYRDF 60
Query: 1812 IISKYREEPSRRLTFTEIRKSLVGDLTLLYKVFLFLETWNLINFTAPKP--EGDDDLVGE 1639
II+KYREEPSRRLTFTE+RKSLVGD+T L KVFLFLE W LIN+ AP +G+ + E
Sbjct: 61 IINKYREEPSRRLTFTEVRKSLVGDVTFLNKVFLFLECWGLINYGAPSAGNDGEAEKEHE 120
Query: 1638 EDKWKIRVEEGAPHGVKVVANPNSLKPVSAPLVFSNAA-----SENGFKLPPLASYSDMY 1474
+++ K++VEEGAP+G++VVA PNSLKP+S P AA S G K+ PLASYSD+Y
Sbjct: 121 KERCKLKVEEGAPNGIRVVATPNSLKPISLPRDTKIAAGGGDESGAGVKIAPLASYSDVY 180
Query: 1473 NELMQLNKLVCVNCKGSCDSGHYEYTKEKGIMICLKCFKNENYGENKSVEDFKFNDCTPS 1294
+L++ ++ C NC C SGHY TK+ +IC KCFKN NYGE +S+EDFK N+ +
Sbjct: 181 GDLIRRKEVNCGNCGDKCGSGHYRSTKD-NFIICTKCFKNGNYGEKRSMEDFKLNESSEI 239
Query: 1293 NGNXXXXXXXXXXXXXXXXXLKHGDDWELVAQNVQTKIKLDCISKLIQMPFGELMLGSAN 1114
+ N LKHGDDWELVAQ+V+TK KL+CISKLI++PFGELML S
Sbjct: 240 SANHSAVWTEGETLLLLESVLKHGDDWELVAQSVRTKTKLECISKLIELPFGELMLASVR 299
Query: 1113 GKNRFWEANDRVISVKQVQLGSTESQETTITVNQLHELKNESQQNGDAEDLGPPQKRLCP 934
+ V + QVQ+ S++ QET++T +Q E KNE +QNGDA + P ++R
Sbjct: 300 RNDNSNSVTGIVNNRNQVQVSSSDHQETSMTQDQSSEPKNEVEQNGDAVNENPSKRRRV- 358
Query: 933 APVADASSSLMKRVARISMLVGSHVTXXXXXXXXXALCYENLCPREIFEVNDNGSHEFGY 754
+ ++D+SSSLMK+V +S +V HVT ALC EN PR+IF+V
Sbjct: 359 STLSDSSSSLMKQVGLLSTVVDPHVTAAAASAAITALCDENSLPRDIFDVE--------- 409
Query: 753 YPQNNEIERASLAKDSDMEERHTSGDQETSSMKNNXXXXXXXXXXXXXXXXXXXXXXXXX 574
++N RA A+ +M E T S +K++
Sbjct: 410 --EDNASARALEAEGLEMVEGSTQ-----SEVKDDIPLTLRIRAAIGTALGATAARAKLL 462
Query: 573 ADQEDREIEHLVATIIEMQAKKLQCKMRYIGDLEMIMEKEYTQMEELEESVMSERMKVLQ 394
ADQEDREIEHLVATIIE Q +KLQ K+++ +LE++MEKE+ +MEEL++S+++ER+ VL+
Sbjct: 463 ADQEDREIEHLVATIIEAQVEKLQQKVKHFDELELLMEKEHAEMEELKDSILTERIDVLR 522
Query: 393 KIFGAGISRWRDH 355
K F +G++RW+ +
Sbjct: 523 KTFKSGVARWKHY 535
>ref|XP_002322279.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222869275|gb|EEF06406.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 570
Score = 478 bits (1230), Expect = e-132
Identities = 273/553 (49%), Positives = 350/553 (63%), Gaps = 9/553 (1%)
Frame = -2
Query: 1971 PNFKELDLYTIPSYSSWFSWHDIHQIERYSLKEFFDGTSITRTPKIYKEYRDFIISKYRE 1792
PN ELDLYTIPSYSSWFSWHDIH+ ER +L+EFFDG+SITRTPKIYKEYRDFII+KYRE
Sbjct: 16 PNEPELDLYTIPSYSSWFSWHDIHETERVALREFFDGSSITRTPKIYKEYRDFIINKYRE 75
Query: 1791 EPSRRLTFTEIRKSLVGDLTLLYKVFLFLETWNLINFTAPKPEGDDDLVGEEDKWKIRVE 1612
+PSRRLTFTEIRKSLVGD++LL KVFLFL W LINF+ K E G D +RVE
Sbjct: 76 DPSRRLTFTEIRKSLVGDVSLLNKVFLFLNNWGLINFSCEKNEEIGLGSGNVD---VRVE 132
Query: 1611 EGAPHGVKVVANPNSLKPVSAPLVFSNA------ASENGFKLPPLASYSDMYNELMQLNK 1450
+GAP+GV++V P+ LKP+S V S+A S G KLPPLASYSD++ EL+ K
Sbjct: 133 DGAPNGVRIVEMPDKLKPISVGSVQSSAEGSGGGGSGTGLKLPPLASYSDVFGELVGKKK 192
Query: 1449 -LVCVNCKGSCDSGHYEYTKEKGIMICLKCFKNENYGENKSVEDFKFNDCTPSNGNXXXX 1273
+VC NC GSCDSG YE++K +IC KCF + YGENKS +DFK +NG+
Sbjct: 193 EVVCGNCGGSCDSGQYEHSK-GDYLICQKCFNDGTYGENKSKDDFKLKVSAENNGSNAAV 251
Query: 1272 XXXXXXXXXXXXXLKHGDDWELVAQNVQTKIKLDCISKLIQMPFGELMLGSANGKNRFWE 1093
+HG+DW+LVAQNV+TK KLDCISKLI++PFG+L+L S GK
Sbjct: 252 WTEEETLRLLESVSRHGNDWDLVAQNVKTKTKLDCISKLIELPFGDLILSSTYGKGNSSG 311
Query: 1092 ANDRVISVKQVQLGSTESQETTITVNQLHELKNESQQNGDAEDLGPPQKRLCPAPVADAS 913
+ KQV +E Q+ T +QLHE N +++ GD D GP KR V+DA
Sbjct: 312 QIGSTNNSKQVPAAPSEHQDDTKHEDQLHEQMNANEEKGDVMDDGPLLKRRRITSVSDAG 371
Query: 912 SSLMKRVARISMLVGSHVTXXXXXXXXXALCYENLCPREIFE-VNDNGSHEFGYYPQNNE 736
SLMK+VA IS +VG +T ALC E CPREIF+ D S+ F +++
Sbjct: 372 GSLMKQVALISTMVGPDITAAAAEAAVAALCDETACPREIFDGEEDFPSNGFSSPSFHSK 431
Query: 735 IERASLAKDSDMEERHT-SGDQETSSMKNNXXXXXXXXXXXXXXXXXXXXXXXXXADQED 559
+R S++++ T S ++E S+ +N+ ADQED
Sbjct: 432 SKRVDEVDASEVKQTPTQSVNEEASAWQNDIPLSLRLRAAVATTLGAAAAHAKLLADQED 491
Query: 558 REIEHLVATIIEMQAKKLQCKMRYIGDLEMIMEKEYTQMEELEESVMSERMKVLQKIFGA 379
RE+E+L+ATI+E Q KKL K+++ DLE+IMEKEY +++EL ES+ ER+ VLQ+ A
Sbjct: 492 REVENLMATIVETQLKKLHHKIKHFDDLELIMEKEYAELDELTESLTEERIDVLQRAIRA 551
Query: 378 GISRWRDHTAAPI 340
GIS+ RDH API
Sbjct: 552 GISKSRDH--API 562
>ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
Length = 522
Score = 463 bits (1191), Expect = e-128
Identities = 260/551 (47%), Positives = 351/551 (63%), Gaps = 5/551 (0%)
Frame = -2
Query: 1989 MESSQDPNFK-ELDLYTIPSYSSWFSWHDIHQIERYSLKEFFDGTSITRTPKIYKEYRDF 1813
ME ++DPN EL+LYTIPS S WF+W +IH+ ER + KE+FDG SITRTPKIYKEYRDF
Sbjct: 1 MEVTKDPNSDFELELYTIPSSSRWFAWEEIHETERTAFKEYFDGNSITRTPKIYKEYRDF 60
Query: 1812 IISKYREEPSRRLTFTEIRKSLVGDLTLLYKVFLFLETWNLINF-TAPKPEGDDDLVGEE 1636
II+KYREEPSRRLTFTE+RKSLVGD+T L+K FL LE W LIN+ TA G D EE
Sbjct: 61 IINKYREEPSRRLTFTEVRKSLVGDVTFLHKAFLLLEHWGLINYGTAQPSSGADAAEEEE 120
Query: 1635 DKWKIRVEEGAPHGVKVVANPNSLKPVSAPLVFSNAASENG--FKLPPLASYSDMYNELM 1462
+ K+R+EEGAP G++V A PNSLKP+ P + + +G KLPPLASYSD+Y +L+
Sbjct: 121 EHRKVRLEEGAPGGIRVAATPNSLKPMLLPRNGKSGVNASGASLKLPPLASYSDVYGDLI 180
Query: 1461 QLNKLVCVNCKGSCDSGHYEYTKEKGIMICLKCFKNENYGENKSVEDFKFNDCTPSNGNX 1282
+ + C C C SGHY T++ +IC+ CFK+ NYGE +S EDF ++ + ++G
Sbjct: 181 RQKEGNCGLCGHKCGSGHYRCTQD-NFIICINCFKSGNYGEKRSTEDFVLSESSENSGKH 239
Query: 1281 XXXXXXXXXXXXXXXXLKHGDDWELVAQNVQTKIKLDCISKLIQMPFGELMLGSANGKNR 1102
LKHGDDWELVAQ+VQTK KLDCISKLI++PFGELMLG A+
Sbjct: 240 DTVWTEAETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGPAHRNVN 299
Query: 1101 FWEANDRVISVKQVQLGSTESQETTITVNQLHELKNESQQNGDAEDLGPPQKRLCPAPVA 922
+AN V + KQVQ S+++QE + T +Q E NE++QNGDA P KR A ++
Sbjct: 300 INDANGIVNNAKQVQSSSSDNQEISKTKDQSPEFTNENEQNGDAVK-ESPSKRQRVASLS 358
Query: 921 DASSSLMKRVARISMLVGSHVTXXXXXXXXXALCYENLCPREIFEVNDNGSHEFGYYPQN 742
D+SSSLM +V IS +V H+T ALC E+LCPREIF+V+ +
Sbjct: 359 DSSSSLMNQVGLISNVVDPHITAAAADAAVSALCDEDLCPREIFDVDGE---------EG 409
Query: 741 NEIERASLAK-DSDMEERHTSGDQETSSMKNNXXXXXXXXXXXXXXXXXXXXXXXXXADQ 565
E+ER+SL++ + R + ++ ADQ
Sbjct: 410 LEMERSSLSEIPLTLRVRAATATALGAAAAR----------------------AKLLADQ 447
Query: 564 EDREIEHLVATIIEMQAKKLQCKMRYIGDLEMIMEKEYTQMEELEESVMSERMKVLQKIF 385
EDREIEHLVATIIE Q K+ K+++ DLE++MEKE+ +ME ++S+++ER+ VL++ F
Sbjct: 448 EDREIEHLVATIIEAQIDKMLQKVKHFDDLELLMEKEHAEMENKKDSILTERIDVLRRTF 507
Query: 384 GAGISRWRDHT 352
+G++RW+D++
Sbjct: 508 RSGVTRWKDYS 518