BLASTX nr result
ID: Panax21_contig00014139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00014139
(1436 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a... 170 3e-68
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera] 174 3e-60
emb|CBI23583.3| unnamed protein product [Vitis vinifera] 172 1e-59
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a... 172 1e-59
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ... 172 2e-58
>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Cucumis sativus] gi|449523563|ref|XP_004168793.1|
PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
3-like 3-like [Cucumis sativus]
Length = 1113
Score = 170 bits (430), Expect(3) = 3e-68
Identities = 84/109 (77%), Positives = 93/109 (85%)
Frame = +1
Query: 349 DQRGLKLIKAILRLLMLRRTKDTRDRHGRSILVLPPTDIQVIECDQSEAEYHFYSALFRR 528
D RGL+LIKAILR LMLRRTKDT D +GR ILVLPPTDIQ + C+QSEAE+ FY ALF++
Sbjct: 725 DPRGLRLIKAILRPLMLRRTKDTNDANGRPILVLPPTDIQTVMCEQSEAEHDFYDALFKK 784
Query: 529 SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPYLVMRWERSHNF*N 675
SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHP+LVM S + N
Sbjct: 785 SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRGDSQQYAN 833
Score = 81.6 bits (200), Expect(3) = 3e-68
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +2
Query: 230 LTGTPLQNNLEDLYSLLCFLHVEPWCNRVWWHKLIQRPY 346
LTGTPLQNNLEDL+SLLCFL VEPWCN WW+KLIQRPY
Sbjct: 683 LTGTPLQNNLEDLFSLLCFLRVEPWCNWAWWNKLIQRPY 721
Score = 56.2 bits (134), Expect(3) = 3e-68
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Frame = +2
Query: 797 DSHEYADLNKLSRRFLETNADFYSSSKKIPSRAYXXXXXXGIRRGENT-----VSHMPGV 961
DS +YA+LNKL+R+FLE+N + + + P+RAY IRRGENT +
Sbjct: 827 DSQQYANLNKLARKFLESNTNSTTMEQVAPTRAYVEDVVECIRRGENTECPICLEFADDA 886
Query: 962 CI*PCVHAMC 991
+ PC H MC
Sbjct: 887 VLTPCAHRMC 896
Score = 105 bits (263), Expect = 2e-20
Identities = 74/184 (40%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Frame = +3
Query: 927 GVKTQCPICLESAYDPVFTLCAHRMCRECLLSRW*TPATGPCPIYRQLLNQNDLITCPSK 1106
G T+CPICLE A D V T CAHRMCRECLLS W TP G CPI RQ+L + +LITCPS+
Sbjct: 871 GENTECPICLEFADDAVLTPCAHRMCRECLLSSWRTPTCGFCPICRQMLRKTELITCPSE 930
Query: 1107 PHYRIDVD-NWE---------HCL*PVDLLFGPLGDSTTEEKNWVLEV-RRKIGTKSKRE 1253
+R+DV+ NW+ CL ++LL G+ + W +I K KR
Sbjct: 931 SPFRVDVEKNWKESSKVSKLLECLERINLLGS--GEKSIVFSQWTTFFDLLEIPLKRKRI 988
Query: 1254 G---FEGV**EQ*KSTKQQ**RVQFLVLYYRQLMTKMC*VQFSSYFQVMLMSLRVGEVGL 1424
G F+G L +R+ + K S +VML+SL+ G VGL
Sbjct: 989 GFFRFDGK-----------------LSQKHRERVLKE--FSESKEIKVMLISLKAGGVGL 1029
Query: 1425 NLTS 1436
NLT+
Sbjct: 1030 NLTA 1033
>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
Length = 1249
Score = 174 bits (442), Expect(2) = 3e-60
Identities = 84/100 (84%), Positives = 94/100 (94%)
Frame = +1
Query: 349 DQRGLKLIKAILRLLMLRRTKDTRDRHGRSILVLPPTDIQVIECDQSEAEYHFYSALFRR 528
DQRGL+LIKAILR LMLRRTKDT+D+ GR ILVLPPTDIQVIEC+QSEAE+ FY ALF+R
Sbjct: 853 DQRGLRLIKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECEQSEAEHDFYDALFKR 912
Query: 529 SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPYLVMR 648
SKV+FDQFV QG+VLHNYA+ILELLLRLRQCCNHP+LVMR
Sbjct: 913 SKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFLVMR 952
Score = 85.5 bits (210), Expect(2) = 3e-60
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 230 LTGTPLQNNLEDLYSLLCFLHVEPWCNRVWWHKLIQRPY 346
LTGTPLQNNLEDLYSLLCFLHVEPWCN WW+KLIQ+PY
Sbjct: 811 LTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQKPY 849
Score = 110 bits (276), Expect = 7e-22
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 22/198 (11%)
Frame = +3
Query: 909 LSRVLGGVK----TQCPICLESAYDPVFTLCAHRMCRECLLSRW*TPATGPCPIYRQLLN 1076
+ V+GG++ T+CPICLESA DPV T CAH MCRECLLS W TP +G CPI R+LL
Sbjct: 997 VEEVVGGIRRGENTECPICLESADDPVLTPCAHLMCRECLLSSWRTPLSGLCPICRKLLK 1056
Query: 1077 QNDLITCPSKPHYRIDVD-NWE---------HCL*PVDLLFGPLGDSTTEEKNW-----V 1211
+ DLITCPS+ +RIDV+ NW+ HCL + +G+ + W +
Sbjct: 1057 KTDLITCPSENRFRIDVEKNWKESSKISELLHCLERISQ--SRIGEKSIVFSQWTSFLDL 1114
Query: 1212 LEV---RRKIGTKSKREGFEGV**EQ*KSTKQQ**RVQFLVLYYRQLMTKMC*VQFSSYF 1382
LE+ RR IG ++G K ++Q R+ + + + KM
Sbjct: 1115 LEIPLRRRGIGFLR----YDG------KVVQKQRERI---LKEFSETEEKM--------- 1152
Query: 1383 QVMLMSLRVGEVGLNLTS 1436
V+LMSL+ G VGLNLT+
Sbjct: 1153 -VLLMSLKAGGVGLNLTA 1169
Score = 58.5 bits (140), Expect = 4e-06
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Frame = +2
Query: 797 DSHEYADLNKLSRRFLETNADFYSSSKKIPSRAYXXXXXXGIRRGENT-----VSHMPGV 961
D+ +YADL+KL+R+FLE N +S+ IP+RA+ GIRRGENT +
Sbjct: 963 DTQQYADLSKLARKFLENNPCSXTSNHSIPTRAFVEEVVGGIRRGENTECPICLESADDP 1022
Query: 962 CI*PCVHAMC 991
+ PC H MC
Sbjct: 1023 VLTPCAHLMC 1032
>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
Length = 1287
Score = 172 bits (437), Expect(2) = 1e-59
Identities = 83/99 (83%), Positives = 93/99 (93%)
Frame = +1
Query: 349 DQRGLKLIKAILRLLMLRRTKDTRDRHGRSILVLPPTDIQVIECDQSEAEYHFYSALFRR 528
DQRGL+LIKAILR LMLRRTKDT+D+ GR ILVLPPTDIQVIEC+QSEAE+ FY ALF+R
Sbjct: 805 DQRGLRLIKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECEQSEAEHDFYDALFKR 864
Query: 529 SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPYLVM 645
SKV+FDQFV QG+VLHNYA+ILELLLRLRQCCNHP+LVM
Sbjct: 865 SKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFLVM 903
Score = 85.5 bits (210), Expect(2) = 1e-59
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 230 LTGTPLQNNLEDLYSLLCFLHVEPWCNRVWWHKLIQRPY 346
LTGTPLQNNLEDLYSLLCFLHVEPWCN WW+KLIQ+PY
Sbjct: 763 LTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQKPY 801
Score = 109 bits (273), Expect = 2e-21
Identities = 80/200 (40%), Positives = 109/200 (54%), Gaps = 24/200 (12%)
Frame = +3
Query: 909 LSRVLGGVK----TQCPICLESAYDPVFTLCAHRMCRECLLSRW*TPATGPCPIYRQLLN 1076
+ V+GG++ T+CPICLESA DPV T CAH MCRECLLS W TP +G CPI R+LL
Sbjct: 941 VEEVVGGIRRGENTECPICLESADDPVLTPCAHLMCRECLLSSWRTPLSGLCPICRKLLK 1000
Query: 1077 QNDLITCPSKPHYRIDVD-NWE---------HCL*PVDLLFGPLGDSTTEEKNW-----V 1211
+ DLITCPS+ +RIDV+ NW+ HCL + +G+ + W +
Sbjct: 1001 KTDLITCPSENRFRIDVEKNWKESSKISELLHCLERISQ--SRIGEKSIVFSQWTSFLDL 1058
Query: 1212 LEV---RRKIGTKSKREGFEGV**EQ*KSTKQQ**RVQFLVLYYRQLMTKMC*VQFSSYF 1382
LE+ RR IG ++G K ++Q R+ + K +FS
Sbjct: 1059 LEIPLRRRGIGFLR----YDG------KVVQKQ-----------RERILK----EFSETE 1093
Query: 1383 Q--VMLMSLRVGEVGLNLTS 1436
+ V+LMSL+ G VGLNLT+
Sbjct: 1094 EKTVLLMSLKAGGVGLNLTA 1113
Score = 57.8 bits (138), Expect = 7e-06
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Frame = +2
Query: 797 DSHEYADLNKLSRRFLETNADFYSSSKKIPSRAYXXXXXXGIRRGENT-----VSHMPGV 961
D+ +YADL+KL+R+FLE N +S+ IP+RA+ GIRRGENT +
Sbjct: 907 DTQQYADLSKLARKFLENNPCSDTSNHSIPTRAFVEEVVGGIRRGENTECPICLESADDP 966
Query: 962 CI*PCVHAMC 991
+ PC H MC
Sbjct: 967 VLTPCAHLMC 976
>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Vitis vinifera]
Length = 1224
Score = 172 bits (437), Expect(2) = 1e-59
Identities = 83/99 (83%), Positives = 93/99 (93%)
Frame = +1
Query: 349 DQRGLKLIKAILRLLMLRRTKDTRDRHGRSILVLPPTDIQVIECDQSEAEYHFYSALFRR 528
DQRGL+LIKAILR LMLRRTKDT+D+ GR ILVLPPTDIQVIEC+QSEAE+ FY ALF+R
Sbjct: 836 DQRGLRLIKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECEQSEAEHDFYDALFKR 895
Query: 529 SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPYLVM 645
SKV+FDQFV QG+VLHNYA+ILELLLRLRQCCNHP+LVM
Sbjct: 896 SKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFLVM 934
Score = 85.5 bits (210), Expect(2) = 1e-59
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 230 LTGTPLQNNLEDLYSLLCFLHVEPWCNRVWWHKLIQRPY 346
LTGTPLQNNLEDLYSLLCFLHVEPWCN WW+KLIQ+PY
Sbjct: 794 LTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWYKLIQKPY 832
Score = 109 bits (273), Expect = 2e-21
Identities = 80/200 (40%), Positives = 109/200 (54%), Gaps = 24/200 (12%)
Frame = +3
Query: 909 LSRVLGGVK----TQCPICLESAYDPVFTLCAHRMCRECLLSRW*TPATGPCPIYRQLLN 1076
+ V+GG++ T+CPICLESA DPV T CAH MCRECLLS W TP +G CPI R+LL
Sbjct: 972 VEEVVGGIRRGENTECPICLESADDPVLTPCAHLMCRECLLSSWRTPLSGLCPICRKLLK 1031
Query: 1077 QNDLITCPSKPHYRIDVD-NWE---------HCL*PVDLLFGPLGDSTTEEKNW-----V 1211
+ DLITCPS+ +RIDV+ NW+ HCL + +G+ + W +
Sbjct: 1032 KTDLITCPSENRFRIDVEKNWKESSKISELLHCLERISQ--SRIGEKSIVFSQWTSFLDL 1089
Query: 1212 LEV---RRKIGTKSKREGFEGV**EQ*KSTKQQ**RVQFLVLYYRQLMTKMC*VQFSSYF 1382
LE+ RR IG ++G K ++Q R+ + K +FS
Sbjct: 1090 LEIPLRRRGIGFLR----YDG------KVVQKQ-----------RERILK----EFSETE 1124
Query: 1383 Q--VMLMSLRVGEVGLNLTS 1436
+ V+LMSL+ G VGLNLT+
Sbjct: 1125 EKTVLLMSLKAGGVGLNLTA 1144
Score = 57.8 bits (138), Expect = 7e-06
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Frame = +2
Query: 797 DSHEYADLNKLSRRFLETNADFYSSSKKIPSRAYXXXXXXGIRRGENT-----VSHMPGV 961
D+ +YADL+KL+R+FLE N +S+ IP+RA+ GIRRGENT +
Sbjct: 938 DTQQYADLSKLARKFLENNPCSDTSNHSIPTRAFVEEVVGGIRRGENTECPICLESADDP 997
Query: 962 CI*PCVHAMC 991
+ PC H MC
Sbjct: 998 VLTPCAHLMC 1007
>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297311253|gb|EFH41677.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1305
Score = 172 bits (435), Expect(2) = 2e-58
Identities = 85/99 (85%), Positives = 91/99 (91%)
Frame = +1
Query: 349 DQRGLKLIKAILRLLMLRRTKDTRDRHGRSILVLPPTDIQVIECDQSEAEYHFYSALFRR 528
D RGLKLIKAILR LMLRRTK+TRD+ G IL LPPTDIQVIEC+QSEAE FY+ALF+R
Sbjct: 919 DSRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDIQVIECEQSEAERDFYTALFKR 978
Query: 529 SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPYLVM 645
SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHP+LVM
Sbjct: 979 SKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVM 1017
Score = 82.0 bits (201), Expect(2) = 2e-58
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 230 LTGTPLQNNLEDLYSLLCFLHVEPWCNRVWWHKLIQRPY 346
LTGTPLQN LEDLYSLLCFLHVEPWCN WW KLIQ+PY
Sbjct: 877 LTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPY 915
Score = 95.5 bits (236), Expect = 3e-17
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 7/177 (3%)
Frame = +3
Query: 927 GVKTQCPICLESAYDPVFTLCAHRMCRECLLSRW*TPATGPCPIYRQLLNQNDLITCPSK 1106
G +CPICLESA DP+ T CAHRMCRECLL+ W +P+ G CPI R +L + +LI+CP+
Sbjct: 1063 GNSKECPICLESADDPILTPCAHRMCRECLLTSWRSPSCGLCPICRTILKRTELISCPTD 1122
Query: 1107 PHYRID-VDNWEHCL*PVDLL--FGPLGDSTTEEKNWVLEVRRK----IGTKSKREGFEG 1265
+R+D V NW+ +LL + S + EK+ V + +R+GFE
Sbjct: 1123 SIFRVDVVKNWKESSKVSELLKCLEKIQKSGSGEKSIVFSQWTSFLDLLEIPLRRKGFEF 1182
Query: 1266 V**EQ*KSTKQQ**RVQFLVLYYRQLMTKMC*VQFSSYFQVMLMSLRVGEVGLNLTS 1436
+ + + K + + ++ + + K ++LMSL+ G VGLNLT+
Sbjct: 1183 LRFDGKLAQKGR----EKVLKEFNETKQK----------TILLMSLKAGGVGLNLTA 1225