BLASTX nr result

ID: Panax21_contig00014135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014135
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26135.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002278027.1| PREDICTED: 50S ribosomal protein L33 [Vitis ...    88   6e-16
ref|NP_001055710.1| Os05g0452600 [Oryza sativa Japonica Group] g...    87   1e-15
ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [C...    86   4e-15
gb|ABK21647.1| unknown [Picea sitchensis] gi|116780944|gb|ABK218...    85   5e-15

>emb|CBI26135.3| unnamed protein product [Vitis vinifera]
          Length = 101

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/52 (86%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
 Frame = -3

Query: 302 AASQFIRLVSAAGTGFFYVKKKNPKNPT-KLEFRKYDPRVNRHVLFTEAKMK 150
           AAS FIRLVS+AGTGFFYVKKKNP+    KLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 50  AASIFIRLVSSAGTGFFYVKKKNPRKMLEKLEFRKYDPRVNRHVLFTEAKMK 101


>ref|XP_002278027.1| PREDICTED: 50S ribosomal protein L33 [Vitis vinifera]
          Length = 59

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/52 (86%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
 Frame = -3

Query: 302 AASQFIRLVSAAGTGFFYVKKKNPKNPT-KLEFRKYDPRVNRHVLFTEAKMK 150
           AAS FIRLVS+AGTGFFYVKKKNP+    KLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 8   AASIFIRLVSSAGTGFFYVKKKNPRKMLEKLEFRKYDPRVNRHVLFTEAKMK 59


>ref|NP_001055710.1| Os05g0452600 [Oryza sativa Japonica Group]
           gi|226493452|ref|NP_001150073.1| LOC100283702 [Zea mays]
           gi|242088467|ref|XP_002440066.1| hypothetical protein
           SORBIDRAFT_09g025380 [Sorghum bicolor]
           gi|357133012|ref|XP_003568122.1| PREDICTED: 50S
           ribosomal protein L33-like [Brachypodium distachyon]
           gi|357136557|ref|XP_003569870.1| PREDICTED: 50S
           ribosomal protein L33-like [Brachypodium distachyon]
           gi|113579261|dbj|BAF17624.1| Os05g0452600 [Oryza sativa
           Japonica Group] gi|195629488|gb|ACG36385.1| 50S
           ribosomal protein L33 [Zea mays]
           gi|195636476|gb|ACG37706.1| 50S ribosomal protein L33
           [Zea mays] gi|195637860|gb|ACG38398.1| 50S ribosomal
           protein L33 [Zea mays] gi|195656701|gb|ACG47818.1| 50S
           ribosomal protein L33 [Zea mays]
           gi|218196895|gb|EEC79322.1| hypothetical protein
           OsI_20170 [Oryza sativa Indica Group]
           gi|218197095|gb|EEC79522.1| hypothetical protein
           OsI_20605 [Oryza sativa Indica Group]
           gi|222632209|gb|EEE64341.1| hypothetical protein
           OsJ_19181 [Oryza sativa Japonica Group]
           gi|223975085|gb|ACN31730.1| unknown [Zea mays]
           gi|241945351|gb|EES18496.1| hypothetical protein
           SORBIDRAFT_09g025380 [Sorghum bicolor]
           gi|413946041|gb|AFW78690.1| hypothetical protein
           ZEAMMB73_147625 [Zea mays] gi|413946042|gb|AFW78691.1|
           hypothetical protein ZEAMMB73_147625 [Zea mays]
           gi|413946043|gb|AFW78692.1| hypothetical protein
           ZEAMMB73_147625 [Zea mays] gi|413946044|gb|AFW78693.1|
           hypothetical protein ZEAMMB73_147625 [Zea mays]
          Length = 57

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/51 (86%), Positives = 47/51 (92%), Gaps = 1/51 (1%)
 Frame = -3

Query: 299 ASQFIRLVSAAGTGFFYVKKKNPKNPT-KLEFRKYDPRVNRHVLFTEAKMK 150
           AS FIRLVSAAGTGFFYVK+KNP+  T KLEFRKYDPRVN+HVLFTEAKMK
Sbjct: 7   ASIFIRLVSAAGTGFFYVKRKNPRRITEKLEFRKYDPRVNKHVLFTEAKMK 57


>ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [Cucumis sativus]
           gi|449488522|ref|XP_004158068.1| PREDICTED: 50S
           ribosomal protein L33-like [Cucumis sativus]
          Length = 57

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/50 (84%), Positives = 44/50 (88%)
 Frame = -3

Query: 299 ASQFIRLVSAAGTGFFYVKKKNPKNPTKLEFRKYDPRVNRHVLFTEAKMK 150
           A+ FIRLVSAAGTGFFYVK+K  K   KLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 8   ATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57


>gb|ABK21647.1| unknown [Picea sitchensis] gi|116780944|gb|ABK21892.1| unknown
           [Picea sitchensis]
          Length = 57

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/50 (84%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
 Frame = -3

Query: 296 SQFIRLVSAAGTGFFYVKKKNPKN-PTKLEFRKYDPRVNRHVLFTEAKMK 150
           S  IRLVS+AGTGFFYVK+KNP+  P KLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 8   SILIRLVSSAGTGFFYVKRKNPRKLPEKLEFRKYDPRVNRHVLFTEAKMK 57


Top