BLASTX nr result

ID: Panax21_contig00014123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014123
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative...    65   8e-09
ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...    59   4e-07
ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...    58   9e-07
ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago...    55   8e-06

>ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
           gi|223543730|gb|EEF45258.1| ATP-dependent RNA and DNA
           helicase, putative [Ricinus communis]
          Length = 547

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 379 SFPDRELASSQKDICSLLIEQFLERLGWQKPRPPK 275
           SFPDRELA+SQK ICSLLIE+FLERLGWQKPR  K
Sbjct: 494 SFPDRELAASQKAICSLLIEEFLERLGWQKPRTTK 528


>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 565

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 379 SFPDRELASSQKDICSLLIEQFLERLGWQKP 287
           SFPD ELA+SQK ICS+LIE+FLERLGWQKP
Sbjct: 512 SFPDHELAASQKAICSMLIEEFLERLGWQKP 542


>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 600

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -3

Query: 379 SFPDRELASSQKDICSLLIEQFLERLGWQKP 287
           SFPD ELA SQK ICS+LIE+FLERLGWQKP
Sbjct: 547 SFPDHELAVSQKAICSMLIEEFLERLGWQKP 577


>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -3

Query: 379 SFPDRELASSQKDICSLLIEQFLERLGWQK 290
           SFPDRELA+SQK IC LLIE+FLER GWQK
Sbjct: 517 SFPDRELAASQKAICGLLIEEFLERFGWQK 546


>ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago truncatula]
           gi|355512092|gb|AES93715.1| ATP-dependent RNA helicase
           SUPV3L1 [Medicago truncatula]
          Length = 570

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -3

Query: 379 SFPDRELASSQKDICSLLIEQFLERLGWQKP 287
           SFPD ELA SQK +CS+LIE+FL+R GWQKP
Sbjct: 517 SFPDHELAKSQKALCSMLIEEFLDRYGWQKP 547


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