BLASTX nr result

ID: Panax21_contig00014087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014087
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18062.1| unknown [Picea sitchensis]                              82   3e-14
emb|CBI36847.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    82   6e-14
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]    82   6e-14
ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...    81   8e-14

>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/45 (88%), Positives = 41/45 (91%)
 Frame = +3

Query: 147 GTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 281
           GTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVK Y S RS
Sbjct: 149 GTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEYVSRRS 193


>emb|CBI36847.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +3

Query: 147 GTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 281
           GT GIVDYTNYDDMK+AIRKLD+SEFRNAFSR  +RVK YDSSRS
Sbjct: 148 GTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYDSSRS 192


>ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359480272|ref|XP_003632425.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera]
          Length = 296

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +3

Query: 147 GTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 281
           GT GIVDYTNYDDMK+AIRKLD+SEFRNAFSR  +RVK YDSSRS
Sbjct: 148 GTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYDSSRS 192


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +3

Query: 147 GTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 281
           GT GIVDYTNYDDMK+AIRKLD+SEFRNAFSR  +RVK YDSSRS
Sbjct: 148 GTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYDSSRS 192


>ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 273

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/50 (78%), Positives = 44/50 (88%), Gaps = 3/50 (6%)
 Frame = +3

Query: 147 GTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDS---SRSPG 287
           GTTGIVDYTNYDDMKYAI+KLD+SEFRNAFS+  +RV+ YDS   SRSPG
Sbjct: 121 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRDSRSPG 170


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