BLASTX nr result

ID: Panax21_contig00014080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014080
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    90   6e-16
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    82   1e-13
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    78   2e-12

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 58/147 (39%), Positives = 84/147 (57%), Gaps = 3/147 (2%)
 Frame = +3

Query: 3   FNDENRRLSSSFTVPSLNLR-IRGLNVCAVHGKHFFDWQL-NVYPAITKIHNKTKNLTWI 176
           ++ + +  S SF VP L  R IRGLN+C V+G    D +   +YP   +I NKTK L W 
Sbjct: 296 YSHQKQNNSVSFAVPPLPSRKIRGLNLCIVYGLRNTDKKCATLYPPDAEISNKTKVLKWS 355

Query: 177 YFPIYFGTREKGGFGSGVDRDGEDFVWLSHWKFG-NQLEGGDEVSVTVFIGEELIQVEKI 353
           Y PI +G          V + GED +WLSHW+FG +QLE GD+V+V+  +  +  QV+K 
Sbjct: 356 YNPIVYG----------VPQIGEDMLWLSHWRFGTDQLEVGDQVNVSASVTPD-FQVKKC 404

Query: 354 GINLVYGDIEDNVSENIDEIESDEVVG 434
           G++LVY   ++    N +EI     +G
Sbjct: 405 GVHLVYEQEDNYTLLNNEEIVQSSSIG 431


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
 Frame = +3

Query: 3    FNDENRRLSSSFTV-PSLNLRIRGLNVCAVHGKHFFDWQLNVYPAITKIHNKTKNLTWIY 179
            F+ ++   S SFT+ P  + +IRGLN+C V+ +    + L+      +++N+TK   W Y
Sbjct: 907  FDHKSTGSSLSFTINPLSDYKIRGLNLCTVYARDHEVYWLHAAGHYARMNNETKGTNWSY 966

Query: 180  FPIYFGTREKGGFGSGVDRDGEDFVWLSHWKFGNQLEGGDEVSVTVFIGEELIQVEKIGI 359
             P ++   E          D ED +WLS+WKFG + E GD+V+V+V +      V++ GI
Sbjct: 967  SPTFYALPED---------DDEDMLWLSYWKFGGEFEVGDKVNVSVRMPFG-YYVKECGI 1016

Query: 360  NLVYGDIE-DNVSENIDEIESD-----EVVGGDLTKYQLSTGAYFLAH 485
             +VY + E DN S   D I S+      +   DL+ YQ+    YFL H
Sbjct: 1017 RIVYEENEKDNQSNTADIIPSNSFWHQNITDRDLSPYQVGKSVYFLHH 1064


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
 Frame = +3

Query: 3    FNDENRRLSSSFTVPSL-NLRIRGLNVCAVHGKHFFDWQLNVYPAITKIHNKTKNLTWIY 179
            FN  +   S SF V +    +I+GL++C ++     +    +     KI+NKT    W Y
Sbjct: 996  FNQRSESSSISFEVEAKPGHKIKGLSLCTLYTYDKLEGGGYIDENCAKINNKTICEKWTY 1055

Query: 180  FPIYFGTREKGGFGSGVDRDGEDFVWLSHWKFGNQLEGGDEVSVTVFIGEELIQVEKIGI 359
             P ++G          + +  E+ +WLSHW FG+QLE GDEV + V +   L  V+K GI
Sbjct: 1056 SPTFYG----------MPKPLEEMLWLSHWTFGDQLEVGDEVHILVEMASGL-TVKKCGI 1104

Query: 360  NLVYGDIEDNVSENIDEIESDE-----VVGGDLTKYQLSTGAYFLAH-------GSQVYL 503
             L+Y   E++ ++ I E  S       +   D+  Y+L T +Y+L H       GS  Y 
Sbjct: 1105 RLIYE--EESTTQEIAESSSSSSWYRTMADTDMEAYELGTASYYLCHHKFQTHQGSGRYD 1162

Query: 504  LDDIP--RRVFGDNVKYEELGNWT 569
             D++     +F + ++  E  +WT
Sbjct: 1163 WDNLSGYEYIFEERMEDPETEDWT 1186


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
 Frame = +3

Query: 3    FNDENRRLSSSFTVPSLNLR-IRGLNVCAVHGKHFFDWQLNVYPAITKIHNKTKNLTWIY 179
            ++ +N     SFT+P  ++R + GLN+C V+  +     L  +  I KI NKTK+L W Y
Sbjct: 985  YSPQNEGPLISFTMPPSHVRKVCGLNICIVYTCNDVRNGLTDHHYI-KIWNKTKDLKWTY 1043

Query: 180  FPIYFGTREKGGFGSGVDRDGEDFVWLSHWKFGNQLEGGDEVSVTVFIGEELIQVEKIGI 359
             PI++G  E            +  +WLSHWK  + LEGGD+++V+  +     Q + I I
Sbjct: 1044 SPIFYGIPEPE----------KSMLWLSHWKLEDLLEGGDQLNVSAVMSTG-YQAKNIRI 1092

Query: 360  NLVYGDIEDNVSENIDEIESD------EVVGGDLTKYQLSTGAYFLAHGSQVYLL-DDIP 518
            +LVY    +    N +E E +           D+  Y++   A+FL +    YL+  +I 
Sbjct: 1093 HLVYDQENEETELNSEETEENASFWHRNCSNVDVEMYRVGRDAFFLCNYD--YLIHQEIS 1150

Query: 519  RRVFGDNVKYEEL 557
               FG+ ++Y  L
Sbjct: 1151 ENGFGNLMEYSHL 1163


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