BLASTX nr result

ID: Panax21_contig00014068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014068
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245...    98   2e-18
gb|ABA91272.1| transposon protein, putative, CACTA, En/Spm sub-c...    97   6e-18
ref|NP_001173002.1| Os02g0530850 [Oryza sativa Japonica Group] g...    97   6e-18
gb|AAP53328.2| transposon protein, putative, CACTA, En/Spm sub-c...    97   6e-18
gb|AAM18727.1|AC092548_5 putative TNP2-like transposon protein [...    96   7e-18

>ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245099 [Vitis vinifera]
          Length = 1264

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 18/189 (9%)
 Frame = +2

Query: 17   PTFTAAELETFTNANFQQWFKKRV----EAESISERFIDVIQGPYKVVSSFPGCIVNGYR 184
            P   A +++      F  WF++R+        ISE  + + +GP   V  + G I+NG+R
Sbjct: 740  PRIRARDVDLIHTREFISWFEERIIQMRHEGPISEHILSLSRGPSTSVICYRGYIINGFR 799

Query: 185  FRVDDLHE-LTSVNSGVVV---LGSCYQDSESN-------YYGRLQDVVVLNYHGGKKVV 331
            F + +  +   + NSGVVV   + S     + N       YYG L DV+ L+Y GG +V+
Sbjct: 800  FHIREREKGKKTQNSGVVVTAEISSFASARDKNPIPGHVFYYGVLTDVIELHYLGGNRVI 859

Query: 332  TFKCSWFD---TEKGVKVDRNRITTVDIKSMLNSDDVYVLTSQVTQVYYAPNVVNTRSPW 502
             FKC W+D   + +G+K D    T ++ +  + +D+ +VL SQ  QV+Y  N  +    W
Sbjct: 860  LFKCDWWDVINSGRGIKKDGYGFTCLNFERTICTDEPFVLASQAKQVFYVQN--SNEENW 917

Query: 503  YTVVTTKTR 529
            +TVV  +TR
Sbjct: 918  HTVVEIQTR 926


>gb|ABA91272.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 823

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 51/170 (30%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
 Frame = +2

Query: 53   NANFQQWFKKRV------EAESISERFIDVIQGPYKVVSSFPGCIVNGYRFRVD--DLHE 208
            N  F  WFK+++      +   + E  + + +GP K ++ F G  +NG+R+R +  D   
Sbjct: 620  NKKFINWFKEKIYQQHQHDKSEVMEDLLSLSRGPLKNITCFTGYDMNGFRYRTERRDSRR 679

Query: 209  LTSVNSGVVVLGSCYQDSESNYYGRLQDVVVLNYHGGKKVVTFKCSW---FDTEKGVKVD 379
             T  NSGV+VLG      +  YYG L +++ + Y GG++V  F+C+W   F+ ++G+++D
Sbjct: 680  CTQ-NSGVMVLGD-----DVEYYGVLTEILEIQYLGGRRVPLFRCNWVDVFNKDRGIRID 733

Query: 380  RNRITTVDIKSMLNSDDVYVLTSQVTQVYYAPNVVNTRSPWYTVVTTKTR 529
            +  +T+V+++ +L +D+ +VL SQ  QV++  +  N    W+ +   + R
Sbjct: 734  KYGLTSVNLQRLLQTDEPFVLASQAAQVFFVKD--NQIKGWHLIEKMQPR 781


>ref|NP_001173002.1| Os02g0530850 [Oryza sativa Japonica Group]
           gi|255670963|dbj|BAH91731.1| Os02g0530850 [Oryza sativa
           Japonica Group]
          Length = 1145

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 51/170 (30%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
 Frame = +2

Query: 53  NANFQQWFKKRV------EAESISERFIDVIQGPYKVVSSFPGCIVNGYRFRVD--DLHE 208
           N  F  WFK+++      +   + E  + + +GP K ++ F G  +NG+R+R +  D   
Sbjct: 320 NKKFINWFKEKIYQQHQHDKSEVMEDLLSLSRGPLKNITCFTGYDMNGFRYRTERRDSRR 379

Query: 209 LTSVNSGVVVLGSCYQDSESNYYGRLQDVVVLNYHGGKKVVTFKCSW---FDTEKGVKVD 379
            T  NSGV+VLG      +  YYG L +++ + Y GG++V  F+C+W   F+ ++G+++D
Sbjct: 380 CTQ-NSGVMVLGD-----DVEYYGVLTEILEIQYLGGRRVPLFRCNWVDVFNKDRGIRID 433

Query: 380 RNRITTVDIKSMLNSDDVYVLTSQVTQVYYAPNVVNTRSPWYTVVTTKTR 529
           +  +T+V+++ +L +D+ +VL SQ  QV++  +  N    W+ +   + R
Sbjct: 434 KYGLTSVNLQRLLQTDEPFVLASQAAQVFFVKD--NQIKGWHLIEKMQPR 481


>gb|AAP53328.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 1647

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 51/170 (30%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
 Frame = +2

Query: 53   NANFQQWFKKRV------EAESISERFIDVIQGPYKVVSSFPGCIVNGYRFRVD--DLHE 208
            N  F  WFK+++      +   + E  + + +GP K ++ F G  +NG+R+R +  D   
Sbjct: 886  NKKFINWFKEKIYQQHQHDKSEVMEDLLSLSRGPLKNITCFTGYDMNGFRYRTERRDSRR 945

Query: 209  LTSVNSGVVVLGSCYQDSESNYYGRLQDVVVLNYHGGKKVVTFKCSW---FDTEKGVKVD 379
             T  NSGV+VLG      +  YYG L +++ + Y GG++V  F+C+W   F+ ++G+++D
Sbjct: 946  CTQ-NSGVMVLGD-----DVEYYGVLTEILEIQYLGGRRVPLFRCNWVDVFNKDRGIRID 999

Query: 380  RNRITTVDIKSMLNSDDVYVLTSQVTQVYYAPNVVNTRSPWYTVVTTKTR 529
            +  +T+V+++ +L +D+ +VL SQ  QV++  +  N    W+ +   + R
Sbjct: 1000 KYGLTSVNLQRLLQTDEPFVLASQAAQVFFVKD--NQIKGWHLIEKMQPR 1047


>gb|AAM18727.1|AC092548_5 putative TNP2-like transposon protein [Oryza sativa Japonica Group]
          Length = 1571

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 53/170 (31%), Positives = 96/170 (56%), Gaps = 11/170 (6%)
 Frame = +2

Query: 53   NANFQQWFKKRV------EAESISERFIDVIQGPYKVVSSFPGCIVNGYRFRVD--DLHE 208
            N  F  WFK+++      +   + E  + + +GP K ++ F G  +NG+R+R +  D   
Sbjct: 886  NKKFINWFKEKIYQQHQHDKSEVMEDLLSLSRGPLKNITCFTGYDMNGFRYRTERRDSRR 945

Query: 209  LTSVNSGVVVLGSCYQDSESNYYGRLQDVVVLNYHGGKKVVTFKCSW---FDTEKGVKVD 379
             T  NSGV+VLG      +  YYG L +++ + Y GG++V  F+C+W   F+ ++G+++D
Sbjct: 946  CTQ-NSGVMVLGD-----DVEYYGVLTEILEIQYLGGRRVPLFRCNWVDVFNKDRGIRID 999

Query: 380  RNRITTVDIKSMLNSDDVYVLTSQVTQVYYAPNVVNTRSPWYTVVTTKTR 529
            +  +T+V+++ +L +D+ +VL SQ  QV++  +  N     Y VV    R
Sbjct: 1000 KYGLTSVNLQRLLQTDEPFVLASQAAQVFFVKD--NQIKALYVVVMISGR 1047


Top