BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014057
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]               91   9e-17
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]      91   9e-17
ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4...    76   4e-12
ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]     76   4e-12
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]         75   5e-12

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 72/195 (36%), Positives = 99/195 (50%), Gaps = 36/195 (18%)
 Frame = +3

Query: 12   EQERRDKEKGQTY*QHKKLGVIQARRTRARVGNKPAKIYENDESDVNASSTVMEE--SEM 185
            E+ +R +  G +  +  K G  QARRTR R+G KP KIYEN ESD + S   MEE  ++M
Sbjct: 973  EKRKRGRPAGPST-KKGKAGFSQARRTRPRIG-KPPKIYEN-ESDASDSGEKMEEEGTKM 1029

Query: 186  GRRVDEIIGLVDKESPKVIEQKNAEDGK---QGEGVDGTYLAGTINEK------------ 320
            G     I G+  KE P++ E +  ED +   +G+  +       + EK            
Sbjct: 1030 GGN-HAIHGVECKECPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDS 1088

Query: 321  ---------------LEAPVEAMLLDMIPSLGTQSSS----VLASEEQPSDPNPVAVKKK 443
                           +  PV+AMLLDMIPSLG + +     ++  E+ P +     VKKK
Sbjct: 1089 ENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPVKKK 1148

Query: 444  KVSYKDIAGDLLKDW 488
            KVSYKD+AG LLKDW
Sbjct: 1149 KVSYKDVAGALLKDW 1163


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 72/195 (36%), Positives = 99/195 (50%), Gaps = 36/195 (18%)
 Frame = +3

Query: 12   EQERRDKEKGQTY*QHKKLGVIQARRTRARVGNKPAKIYENDESDVNASSTVMEE--SEM 185
            E+ +R +  G +  +  K G  QARRTR R+G KP KIYEN ESD + S   MEE  ++M
Sbjct: 972  EKRKRGRPAGPST-KKGKAGFSQARRTRPRIG-KPPKIYEN-ESDASDSGEKMEEEGTKM 1028

Query: 186  GRRVDEIIGLVDKESPKVIEQKNAEDGK---QGEGVDGTYLAGTINEK------------ 320
            G     I G+  KE P++ E +  ED +   +G+  +       + EK            
Sbjct: 1029 GGN-HAIHGVECKECPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDS 1087

Query: 321  ---------------LEAPVEAMLLDMIPSLGTQSSS----VLASEEQPSDPNPVAVKKK 443
                           +  PV+AMLLDMIPSLG + +     ++  E+ P +     VKKK
Sbjct: 1088 ENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPVKKK 1147

Query: 444  KVSYKDIAGDLLKDW 488
            KVSYKD+AG LLKDW
Sbjct: 1148 KVSYKDVAGALLKDW 1162


>ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
            sativus]
          Length = 918

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
 Frame = +3

Query: 54   QHKKLGVIQARRTRARVGNKPAKIYENDESDVNASSTVMEESEMGRRVDEIIGLVDKESP 233
            Q +K    + RRTRA +    A I   + SD +  +   EES+ G+  +E          
Sbjct: 766  QREKAEAGKIRRTRAHIAKGSANIGGINNSDSSDEANA-EESKRGKDENE-----KTNEF 819

Query: 234  KVIEQKNAED-GKQGEGVDGTYLAGTINEKLEA---PVEAMLLDMIPSLG---------- 371
            K++E  NA+  GK  E V     +    EKLE    P+EAMLLDM+PSLG          
Sbjct: 820  KMLEDCNAKQKGKAIEEVRADSKSVEKPEKLEVMKDPLEAMLLDMVPSLGMSGTKSSISS 879

Query: 372  TQSSSVLASEEQPSDPNPVAVKKKKVSYKDIAGDLLKDW 488
            + SSS +  E++P   N     KKKVSYKD+A +LLKDW
Sbjct: 880  SSSSSTVVEEKKPFVENKSEAVKKKVSYKDVASELLKDW 918


>ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
          Length = 1214

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
 Frame = +3

Query: 54   QHKKLGVIQARRTRARVGNKPAKIYENDESDVNASSTVMEESEMGRRVDEIIGLVDKESP 233
            Q +K    + RRTRA +    A I   + SD +  +   EES+ G+  +E          
Sbjct: 1062 QREKAEAGKIRRTRAHIAKGSANIGGINNSDSSDEANA-EESKRGKDENE-----KTNEF 1115

Query: 234  KVIEQKNAED-GKQGEGVDGTYLAGTINEKLEA---PVEAMLLDMIPSLG---------- 371
            K++E  NA+  GK  E V     +    EKLE    P+EAMLLDM+PSLG          
Sbjct: 1116 KMLEDCNAKQKGKAIEEVRADSKSVEKPEKLEVMKDPLEAMLLDMVPSLGMSGTKSSISS 1175

Query: 372  TQSSSVLASEEQPSDPNPVAVKKKKVSYKDIAGDLLKDW 488
            + SSS +  E++P   N     KKKVSYKD+A +LLKDW
Sbjct: 1176 SSSSSTVVEEKKPFVENKSEAVKKKVSYKDVASELLKDW 1214


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
          Length = 1171

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 63/200 (31%), Positives = 94/200 (47%), Gaps = 42/200 (21%)
 Frame = +3

Query: 15   QERRDKEKGQTY*QHKKLGVIQARRTRARVGNKPAKIYE---NDESDVNASSTVMEE--- 176
            + +R +  G    + K+  V QARR R ++  KPAKI E   +DESD +    + +E   
Sbjct: 972  KRKRGRPAGSGIKKVKQPAVKQARRARPQIAKKPAKICEYESSDESDSHGKRPIEQEIDT 1031

Query: 177  --------------SEMGRRVDEIIGLVDKESP--KVIEQKNAEDGKQGEGV-------- 284
                           E  +R +  +  ++K S   K+ +QK+  D ++   +        
Sbjct: 1032 RAGSLDFYKKRSEPQETEKRENVQVAEIEKNSEQNKLDKQKDLNDNERERMLVPEIEMSD 1091

Query: 285  DGTYLAGTINEKLEA---PVEAMLLDMIPSLGTQS-----SSVLASEEQPSDPN----PV 428
                    + EKLE    P++AML DMIPSL TQ      +  +  E+ P   N    P+
Sbjct: 1092 RHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPM 1151

Query: 429  AVKKKKVSYKDIAGDLLKDW 488
              KKKKVSYKD+A +LLKDW
Sbjct: 1152 TTKKKKVSYKDVASELLKDW 1171