BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014044
         (2369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1112   0.0  
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...  1095   0.0  
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1093   0.0  
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...  1092   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1055   0.0  

>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score = 1112 bits (2877), Expect = 0.0
 Identities = 558/777 (71%), Positives = 639/777 (82%), Gaps = 12/777 (1%)
 Frame = -2

Query: 2296 KLIKLRQYDLSSCNA--LAELGFSRMAEILPRDEFFGRPN-------CSFNGLCPKSYAS 2144
            +++K   ++ SSC++   +E+GF R+ EI  R++  GRP+         F+G CPKSYAS
Sbjct: 81   EIMKFGTFEPSSCSSSGFSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYAS 140

Query: 2143 VAETIAXXXXXXXXXXXXXXXVQELLREMGNEAKRGYRKSWRQQ-SVDVGMVCWKYRKLR 1967
            VAE ++                QELL EM  E KR      R++  ++ GM   +Y +LR
Sbjct: 141  VAEAVSSTDVEEDVSASDEI--QELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLR 198

Query: 1966 RRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINEDQELCR 1787
            RRQVKIETEAW  A KEY+ ++ +MCEQKLAPNLPYMKSLFLGWFEP  + I ++QELCR
Sbjct: 199  RRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCR 258

Query: 1786 QGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIEQEVRI 1607
             GKN+++YAPYFDQLPADMMSVITMHKL+GLLMTG  +G  RVV+AAC IG+AIEQEVRI
Sbjct: 259  LGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRI 318

Query: 1606 HNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKLHVVRNIVKGQDDSK 1427
            HNFLE+T++KKV +D   E    + V HEQEKLRK VTN MKKQKLH  R IVKG D+SK
Sbjct: 319  HNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSK 378

Query: 1426 PWTPDARAKVGSRLIELLLQTAYIQPPIDH-LADGPPDIRPAFIHTSQYVIKGTKE-SRS 1253
            PW P+A+AKVGSRLIELL+QTAYIQPP+D+ LAD PPDIRPAF+HT + V++  K+  R 
Sbjct: 379  PWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRR 438

Query: 1252 YGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGARQQR 1073
            +GVI+CDPL+ KGLERT RHMVIPY+PMLVPP+KWTGYDKG HLFL SYVMR  GARQQR
Sbjct: 439  FGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQR 498

Query: 1072 EALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIPLPEQ 893
            EA+KRAP+ QLEPVFEAL+TLG+TKWR+NKR+  V+DRIW  GG LADLVDR D+PLPE+
Sbjct: 499  EAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEK 558

Query: 892  PDTEDEAVLXXXXXXXXXXXKENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLDFRGR 713
            PDTEDEA L           K N ERHSQRCDIELKL+VARKMKDE+GFFYPHNLDFRGR
Sbjct: 559  PDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGR 618

Query: 712  AYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGRITFT 533
            AYP+HP+LNHLGSD+CRGILEFAEGRPLG SGL WLKIHLANLFAGGVDKLS+EGRITFT
Sbjct: 619  AYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFT 678

Query: 532  ENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPVHQDGS 353
            ENHLD+IFDSAD+PLEGKRWWL AEDPFQ LA CINLSEALRSSSPETTISHIPVHQDGS
Sbjct: 679  ENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGS 738

Query: 352  CNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFPDALRA 173
            CNGLQHYAALGRD+LGA AVNL+A  +PADVYSGIAARVLDI+K DA+KDPA FPDALRA
Sbjct: 739  CNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRA 798

Query: 172  RILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYTAK 2
            RIL+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AI+DD ELFGAACY AK
Sbjct: 799  RILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAK 855


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1095 bits (2833), Expect = 0.0
 Identities = 551/768 (71%), Positives = 632/768 (82%), Gaps = 6/768 (0%)
 Frame = -2

Query: 2287 KLRQYDLSSCNALAELGFSRMAEILPRDEFFGRP----NCSFNGLCPKSYASVAETIAXX 2120
            K R     SC+ +  +GF  + E LP DEF  RP      + N  C KSYASVAE +A  
Sbjct: 76   KFRSLIPISCSNIV-MGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVS 134

Query: 2119 XXXXXXXXXXXXXVQELLREMGNEAKRGYR-KSWRQQSVDVGMVCWKYRKLRRRQVKIET 1943
                         V ELL E+  E K+ +  +  +Q+ +  GM   KY+ L+RRQVK+ET
Sbjct: 135  STDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVET 194

Query: 1942 EAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINEDQELCRQGKNRSSY 1763
            EAW QA KEY+ ++ +MCEQKLAPNLPY+KSLFLGWFEP  +KI E+QELC QGK++++Y
Sbjct: 195  EAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAY 254

Query: 1762 APYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIEQEVRIHNFLERTE 1583
            A YF QLPADMM+VITMHKLMGLLMTG  +G ARVV+AA  IG+AIEQEVRIHNFLE+T+
Sbjct: 255  AKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTK 314

Query: 1582 KKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKLHVVRNIVKGQDDSKPWTPDARA 1403
            K+K  +D K +ED  +V T EQEKLRK VTN MKKQKL  V  IV+ QDDSKPW  DARA
Sbjct: 315  KQKAEKD-KQKEDGEHV-TQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARA 372

Query: 1402 KVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYVIKGTKE-SRSYGVIKCDPL 1226
            KVGSRLI+LLLQTAYIQPP + LA  PPDIRPAF+H+ + V K TK  SR YG+I+CD L
Sbjct: 373  KVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDEL 432

Query: 1225 IHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGARQQREALKRAPKK 1046
            + KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L SYVMR  GARQQREA+KRA + 
Sbjct: 433  VFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRN 492

Query: 1045 QLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIPLPEQPDTEDEAVL 866
            QL+PVFEALDTLG+TKWR+NKRVL+V+DRIW  GG LADLVDR+D PLPE+PDTEDEA+ 
Sbjct: 493  QLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALR 552

Query: 865  XXXXXXXXXXXKENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLDFRGRAYPIHPHLN 686
                       KENRERHSQRCDIELKL+VARKMKDEE FFYPHN+DFRGRAYP+HPHLN
Sbjct: 553  TKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLN 612

Query: 685  HLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGRITFTENHLDEIFD 506
            HLGSD+CRG+LEFAEGRPLG+SGL+WLKIHLANLFAGGV+KLS EGRI FTENH+D+IFD
Sbjct: 613  HLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFD 672

Query: 505  SADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 326
            S+DKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSPET++SHIPVHQDGSCNGLQHYAA
Sbjct: 673  SSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAA 732

Query: 325  LGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFPDALRARILVNQVDR 146
            LGRDKLGA AVNL+A  +PADVYSGIAARVLDI+K DAQ+DPA FPDA+RAR+LVNQVDR
Sbjct: 733  LGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDR 792

Query: 145  KLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYTAK 2
            KLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD+ELFGAACY AK
Sbjct: 793  KLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAK 840


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score = 1093 bits (2826), Expect = 0.0
 Identities = 554/769 (72%), Positives = 631/769 (82%), Gaps = 7/769 (0%)
 Frame = -2

Query: 2287 KLRQYDLSSCNALAELGFSRMAEILPRDEFFGRPNC-----SFNGLCPKSYASVAETIAX 2123
            K R     SC+ +  +GF  + E LP DEF  RP       S +  C KSYASVAE +A 
Sbjct: 76   KFRSLIPISCSNIV-MGFQNLGEYLPGDEFLSRPLLKNQVNSNDFCCRKSYASVAEAVAV 134

Query: 2122 XXXXXXXXXXXXXXVQELLREMGNEAKRGYR-KSWRQQSVDVGMVCWKYRKLRRRQVKIE 1946
                          VQELL E+  E K+ +  +  +Q+ +  GM   KY+ L+RRQVK+E
Sbjct: 135  SSTDAEEDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVE 194

Query: 1945 TEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINEDQELCRQGKNRSS 1766
            TEAW QA KEY+ ++ +MCEQKLAPNLPY+KSLFLGWFEP  +KI E+QELC QGK++++
Sbjct: 195  TEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAA 254

Query: 1765 YAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIEQEVRIHNFLERT 1586
            YA Y  QLPADMM+VITMHKLMGLLMTG  +G ARVV+AA  IG+AIEQEVRIHNFLE+T
Sbjct: 255  YAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKT 314

Query: 1585 EKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKLHVVRNIVKGQDDSKPWTPDAR 1406
            +K+K  +D K +ED  +V T EQEKLRK VTN MKKQKL  V  IV+ QDDSKPW  DA+
Sbjct: 315  KKQKAEKD-KQKEDGEHV-TQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAK 372

Query: 1405 AKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYVIKGTKE-SRSYGVIKCDP 1229
            AKVGSRLIELLLQTAYIQPP + LA  PPDIRPAF+H+ + V K TK  SR YG+I+CD 
Sbjct: 373  AKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDE 432

Query: 1228 LIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGARQQREALKRAPK 1049
            L+ KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L SYVMR  GARQQREA+KRA +
Sbjct: 433  LVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASR 492

Query: 1048 KQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIPLPEQPDTEDEAV 869
             QL+PVFEALDTLGSTKWR+NKRVL+VIDRIW  GG LADLVDR+D PLPE+PDTEDEA+
Sbjct: 493  NQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEAL 552

Query: 868  LXXXXXXXXXXXKENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLDFRGRAYPIHPHL 689
                        KENRERHSQRCDIELKL+VARKMKDEEGFFYPHN+DFRGRAYP+HPHL
Sbjct: 553  RTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 612

Query: 688  NHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGRITFTENHLDEIF 509
            NHLGSD+CRG+L FAEGRPLG+SGL+WLKIHLANLFAGGV+KLS EGRI FTENH+D+IF
Sbjct: 613  NHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIF 672

Query: 508  DSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPVHQDGSCNGLQHYA 329
            DSADKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSPET+ISHIPVHQDGSCNGLQHYA
Sbjct: 673  DSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYA 732

Query: 328  ALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFPDALRARILVNQVD 149
            ALGRD+LGA AVNL+A  +PADVYSGIAARVLDI+K DAQ+DPA FPDA+RAR LVNQVD
Sbjct: 733  ALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVD 792

Query: 148  RKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYTAK 2
            RKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD+ELFGAACY AK
Sbjct: 793  RKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAK 841


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1092 bits (2824), Expect = 0.0
 Identities = 549/768 (71%), Positives = 631/768 (82%), Gaps = 6/768 (0%)
 Frame = -2

Query: 2287 KLRQYDLSSCNALAELGFSRMAEILPRDEFFGRP----NCSFNGLCPKSYASVAETIAXX 2120
            K R     SC+ +  +GF  + E LP DEF  RP      + N  C KSYASVAE +A  
Sbjct: 76   KFRSLIPISCSNIV-MGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVS 134

Query: 2119 XXXXXXXXXXXXXVQELLREMGNEAKRGYR-KSWRQQSVDVGMVCWKYRKLRRRQVKIET 1943
                         V ELL E+  E K+ +  +  +Q+ +  GM   KY+ L+RRQVK+ET
Sbjct: 135  STDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVET 194

Query: 1942 EAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINEDQELCRQGKNRSSY 1763
            EAW QA KEY+ ++ +MCEQKLAPNLPY+KSLFLGWFEP  +KI E+QELC QGK++++Y
Sbjct: 195  EAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAY 254

Query: 1762 APYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIEQEVRIHNFLERTE 1583
            A YF QLPADMM+VITMHKLMGLLMTG  +G ARVV+AA  IG+AIEQEVRIHNFLE+T+
Sbjct: 255  AKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTK 314

Query: 1582 KKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKLHVVRNIVKGQDDSKPWTPDARA 1403
            K+K  +D K +ED  +V T EQEKLRK VTN MKKQKL  V  IV+ QDDSKPW  DARA
Sbjct: 315  KQKAEKD-KQKEDGEHV-TQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARA 372

Query: 1402 KVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYVIKGTKE-SRSYGVIKCDPL 1226
            KVGSRLI+LLLQTAYIQPP + LA  PPDI PAF+H+ + V K TK  SR YG+I+CD L
Sbjct: 373  KVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAKETKSASRRYGIIQCDEL 432

Query: 1225 IHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGARQQREALKRAPKK 1046
            + KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L SYVMR  GARQQREA+KRA + 
Sbjct: 433  VFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRN 492

Query: 1045 QLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIPLPEQPDTEDEAVL 866
            QL+PVFEALDTLG+TKWR+NKRVL+V+DRIW  GG LADLVDR+D PLPE+PDTEDEA+L
Sbjct: 493  QLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALL 552

Query: 865  XXXXXXXXXXXKENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLDFRGRAYPIHPHLN 686
                       KENRERHSQRCDIELKL+VARKMKDEE FFYPHN+DFRGRAYP+HPHLN
Sbjct: 553  PKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLN 612

Query: 685  HLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGRITFTENHLDEIFD 506
            HLGSD+CRG+LEFAEGRPLG+SGL+WLKIHLANLFAGGV+KLS EGRI FTENH+D+IFD
Sbjct: 613  HLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFD 672

Query: 505  SADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAA 326
            S+DKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSPET++SHIPVHQDGSCNGLQHYAA
Sbjct: 673  SSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAA 732

Query: 325  LGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFPDALRARILVNQVDR 146
            LGRDKLGA AVNL+A  +PA+ YSGIAARVLDI+K DAQ+DPA FPDA+RAR+LVNQVDR
Sbjct: 733  LGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDR 792

Query: 145  KLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYTAK 2
            KLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD+ELFGAACY AK
Sbjct: 793  KLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAK 840


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1055 bits (2728), Expect = 0.0
 Identities = 532/756 (70%), Positives = 612/756 (80%), Gaps = 10/756 (1%)
 Frame = -2

Query: 2239 GFSRMAEILPRDEFFGRPN-------CSFNGLC--PKSYASVAETIAXXXXXXXXXXXXX 2087
            G  R+  +  + +  GRP         +F GL    K YAS AE IA             
Sbjct: 55   GLRRIGVLSFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIASEEDMSGV----- 109

Query: 2086 XXVQELLREMGNEAKRGYRKSWRQQSVDVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRT 1907
                + ++E+  E  +G  K  +Q  +  G+   K+  LRRRQ+K+ETEAW +A KEYR 
Sbjct: 110  ----DEVQELVEEVNKG-DKLEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRE 164

Query: 1906 IVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINEDQELCRQGKNRSSYAPYFDQLPADMM 1727
            ++ +MCEQKLAPNLPY+KSLFLGWFEP  + I  +Q+LC+QGKNR++YAPYFD LPADMM
Sbjct: 165  LLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMM 224

Query: 1726 SVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEE 1547
            +VITMHKLMGLLMTGEG G ARVV+AAC IGEAIE EVRI  F+E+T+KK     + + +
Sbjct: 225  AVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSA--SSNNPD 282

Query: 1546 DASNVVTHEQEKLRKIVTNAMKKQKLHVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQ 1367
              SN VT EQEKLRK V+  MKKQKL  VR IVK QDDSKPW  DA  KVGSRLIELL++
Sbjct: 283  GGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIE 342

Query: 1366 TAYIQPPIDHLADGPPDIRPAFIHTSQYVIKGT-KESRSYGVIKCDPLIHKGLERTVRHM 1190
            TAYIQPP D L DGPPDIRPAF+HT + VIK T K +R YGVI+CDPL+ KGLE+T RHM
Sbjct: 343  TAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHM 402

Query: 1189 VIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGARQQREALKRAPKKQLEPVFEALDTL 1010
            VIPYMPMLVPP+ WTGYDKG +LFL SYVMRI GARQQREA+KRAP+K LEP FEAL+TL
Sbjct: 403  VIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTL 462

Query: 1009 GSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXK 830
            G+TKWR+NKRVL VIDRIW SGG LADLVDRED+PLPE+PDTEDEA +           K
Sbjct: 463  GNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKK 522

Query: 829  ENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILE 650
            EN ERHSQRCDIELKL+VARKMKDE+GFFYPHNLDFRGRAYP+HP+LNHLGSD+CRGILE
Sbjct: 523  ENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 582

Query: 649  FAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGRITFTENHLDEIFDSADKPLEGKRWW 470
            FAEGRPLGKSGL+WLKIHLAN++AGGVDKLSYEGR+ FTENHL++IFDSAD+PLEG+RWW
Sbjct: 583  FAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWW 642

Query: 469  LKAEDPFQCLAVCINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGADAVN 290
            L AEDPFQCLA CINLSEALRSSSPETTISH+PVHQDGSCNGLQHYAALGRDKLGA AVN
Sbjct: 643  LSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVN 702

Query: 289  LIARGEPADVYSGIAARVLDIIKNDAQKDPATFPDALRARILVNQVDRKLVKQTVMTSVY 110
            L+A  +PADVYSGIAARVLDI++ DAQKDPAT P+ALRAR+L++QVDRKLVKQTVMTSVY
Sbjct: 703  LVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVY 762

Query: 109  GVTYIGARDQIKRRLKERGAISDDAELFGAACYTAK 2
            GVTYIGARDQIKRRLKER AI+D+ E+F A+CY AK
Sbjct: 763  GVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAK 798