BLASTX nr result
ID: Panax21_contig00014043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00014043
(2615 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1155 0.0
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1138 0.0
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 1137 0.0
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 1136 0.0
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 1135 0.0
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 1155 bits (2988), Expect = 0.0
Identities = 572/783 (73%), Positives = 653/783 (83%), Gaps = 8/783 (1%)
Frame = -3
Query: 2325 EAQNHINYFHPERDFVRIGGLH-SQIKLXXXXXXXXXXXXXXXXSY---KGYASVAQAVV 2158
E+Q+H+N P RIG L Q +L + KGYAS A+A+
Sbjct: 42 ESQDHVNSLRPVAGLRRIGVLSFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIA 101
Query: 2157 CTEXXXXXDEVQELLQEMKKENKVP--PKLVGGMGQGKYAMLRKRQIKMETEAWEEAARE 1984
E DEVQEL++E+ K +K+ PKL+GG+ QGK+ +LR+RQIKMETEAWEEAA+E
Sbjct: 102 SEEDMSGVDEVQELVEEVNKGDKLEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKE 161
Query: 1983 YQELLEDMCEHNLAPNLPYMKSLFLGWFEPFKNAIVAEQELCMEGKNQVSHAPYFDQLPA 1804
Y+ELL DMCE LAPNLPY+KSLFLGWFEP ++ I AEQ+LC +GKN+ ++APYFD LPA
Sbjct: 162 YRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPA 221
Query: 1803 DMMAVITXXXXXXXXXXXXXXGCCRVVHAACQIGEAIEQEVRIHKFLEKTKKKNVSNKDL 1624
DMMAVIT G RVV AAC IGEAIE EVRI +F+EKTKKK+ S+ +
Sbjct: 222 DMMAVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNP 281
Query: 1623 DDESDTVTKQQEKLRKKVTILMKKQRRHQVRGIVKEHDDTKPWGQDAQAKVGSRVIQLLI 1444
D S+ VTK+QEKLRKKV++LMKKQ+ QVR IVK DD+KPWGQDA KVGSR+I+LLI
Sbjct: 282 DGGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLI 341
Query: 1443 ETAYIQPPVDQLEDGPPDIRPAFVHDLKTV--DTQRGSRRYGVIECDPLVRRGLEKTARH 1270
ETAYIQPP DQL DGPPDIRPAFVH LKTV +TQ+G+RRYGVIECDPLVR+GLEKTARH
Sbjct: 342 ETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARH 401
Query: 1269 MVIPYMPMLVPPLNWTGYDRGAHLFLPSYIMRTHGAKQQRNAVKRVPTKQMEPIYKALDT 1090
MVIPYMPMLVPPLNWTGYD+GA+LFLPSY+MR HGA+QQR A+KR P K +EP ++AL+T
Sbjct: 402 MVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNT 461
Query: 1089 LGSTKWRVNKRVLGIVDRIWASGGRLADLVDREDVPLLEEPDTKDEAEIXXXXXXXXXXX 910
LG+TKWR+NKRVLG++DRIWASGGRLADLVDREDVPL EEPDT+DEAEI
Sbjct: 462 LGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVK 521
Query: 909 XVNIERHSQRCDVELKLAVSRKMRDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 730
N ERHSQRCD+ELKLAV+RKM+DEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL
Sbjct: 522 KENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 581
Query: 729 EFAEGRPLGKSGLHWLKIHLANLYGGGVDKLSYESRIAFTESHLDDIFDSADRPLEGKRW 550
EFAEGRPLGKSGL WLKIHLAN+Y GGVDKLSYE R+AFTE+HL+DIFDSADRPLEG+RW
Sbjct: 582 EFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRW 641
Query: 549 WLSAEDPFQCLATCINLTEVLRSSSPETTLSYIPIHQDGSCNGLQHYAALGRDKLGAAAV 370
WLSAEDPFQCLATCINL+E LRSSSPETT+S++P+HQDGSCNGLQHYAALGRDKLGAAAV
Sbjct: 642 WLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAV 701
Query: 369 NLVTGEKPADVYSGIADRVLDIMRRDAEKDPATNPNVLRAKLLLNQVDRKLVKQTVMTSV 190
NLV GEKPADVYSGIA RVLDIM+RDA+KDPAT PN LRA+LL++QVDRKLVKQTVMTSV
Sbjct: 702 NLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSV 761
Query: 189 YGVTYIGARDQIKRRLKERGVIEDDTELFAAACYAAKTTLIALGEMFEAARSIMSWLGEC 10
YGVTYIGARDQIKRRLKER I D+ E+F+A+CYAAKTTL ALGEMFEAARSIMSWLG+C
Sbjct: 762 YGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDC 821
Query: 9 AKV 1
AKV
Sbjct: 822 AKV 824
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 1138 bits (2944), Expect = 0.0
Identities = 556/738 (75%), Positives = 627/738 (84%), Gaps = 8/738 (1%)
Frame = -3
Query: 2190 KGYASVAQAVVCTEXXXXXDEVQELLQEMKKENKV--------PPKLVGGMGQGKYAMLR 2035
+ Y S A+A+V T E+QEL++EM KEN+ PK +GGMG GKY LR
Sbjct: 112 RSYGSAAEAIVSTSEEDID-EIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLR 170
Query: 2034 KRQIKMETEAWEEAAREYQELLEDMCEHNLAPNLPYMKSLFLGWFEPFKNAIVAEQELCM 1855
+RQIK+ETEAWEEAA+EYQELL DMCE LAPNLPYMKSLFLGWFEP ++AI AEQ+LC
Sbjct: 171 RRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCD 230
Query: 1854 EGKNQVSHAPYFDQLPADMMAVITXXXXXXXXXXXXXXGCCRVVHAACQIGEAIEQEVRI 1675
EGKN+ ++AP+FDQLPA+MMAVIT G RVV AA IGEAIE E RI
Sbjct: 231 EGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARI 290
Query: 1674 HKFLEKTKKKNVSNKDLDDESDTVTKQQEKLRKKVTILMKKQRRHQVRGIVKEHDDTKPW 1495
H+FLEKTKK N + DL++ + K++E+LRKKV ILMKKQ+ QVR IVK+ DD KPW
Sbjct: 291 HRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPW 350
Query: 1494 GQDAQAKVGSRVIQLLIETAYIQPPVDQLEDGPPDIRPAFVHDLKTVDTQRGSRRYGVIE 1315
GQD KVG R+IQ+L+ETAYIQPP DQL+DGPPDIRPAFVH LKTV+T +GSRRYGVI+
Sbjct: 351 GQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQ 410
Query: 1314 CDPLVRRGLEKTARHMVIPYMPMLVPPLNWTGYDRGAHLFLPSYIMRTHGAKQQRNAVKR 1135
CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYD+G +LFLPSYIMRTHGAKQQR AVKR
Sbjct: 411 CDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKR 470
Query: 1134 VPTKQMEPIYKALDTLGSTKWRVNKRVLGIVDRIWASGGRLADLVDREDVPLLEEPDTKD 955
VP KQ+EP+++ALDTLG+TKWRVN++VLGIVDRIWASGGRLADLVDREDVPL E PDT+D
Sbjct: 471 VPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTED 530
Query: 954 EAEIXXXXXXXXXXXXVNIERHSQRCDVELKLAVSRKMRDEDGFFYPHNLDFRGRAYPMH 775
EAEI N ERHSQRCD+ELKLAV+RKM+DEDGF+YPHNLDFRGRAYPMH
Sbjct: 531 EAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 590
Query: 774 PYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVDKLSYESRIAFTESHLD 595
PYLNHLGSDLCRGILEFAEGRPLG SGL WLKIHLAN+YGGGVDKLSYE R+AF+E+HL+
Sbjct: 591 PYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLE 650
Query: 594 DIFDSADRPLEGKRWWLSAEDPFQCLATCINLTEVLRSSSPETTLSYIPIHQDGSCNGLQ 415
DIFDSA+RPLEGKRWWL AEDPFQCLATCIN+ E LRS SPET +SY+PIHQDGSCNGLQ
Sbjct: 651 DIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQ 710
Query: 414 HYAALGRDKLGAAAVNLVTGEKPADVYSGIADRVLDIMRRDAEKDPATNPNVLRAKLLLN 235
HYAALGRDKLGAAAVNLV G+KPADVYSGIA RVLDIM+RDA KDPA +PNV+RA+LL+N
Sbjct: 711 HYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLIN 770
Query: 234 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDTELFAAACYAAKTTLIALGE 55
QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERGVIEDD ELFAAACYAAKTTL ALGE
Sbjct: 771 QVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGE 830
Query: 54 MFEAARSIMSWLGECAKV 1
MFEAARSIMSWLG+CAK+
Sbjct: 831 MFEAARSIMSWLGDCAKI 848
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1137 bits (2940), Expect = 0.0
Identities = 554/738 (75%), Positives = 627/738 (84%), Gaps = 8/738 (1%)
Frame = -3
Query: 2190 KGYASVAQAVVCTEXXXXXDEVQELLQEMKKENKV--------PPKLVGGMGQGKYAMLR 2035
+ Y S A+A+ T E+QEL++EM KEN+ PK +GGMG GKY +LR
Sbjct: 112 RSYGSAAEAIASTSEEDID-EIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLR 170
Query: 2034 KRQIKMETEAWEEAAREYQELLEDMCEHNLAPNLPYMKSLFLGWFEPFKNAIVAEQELCM 1855
+RQIK+ETEAWEEAA+EYQELL DMCE LAPNLPYMKSLFLGWFEP ++AI AEQ+LC
Sbjct: 171 RRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCD 230
Query: 1854 EGKNQVSHAPYFDQLPADMMAVITXXXXXXXXXXXXXXGCCRVVHAACQIGEAIEQEVRI 1675
EGKN+ ++AP+FDQLPA+MMAVIT G RVV AA IGEAIE E RI
Sbjct: 231 EGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARI 290
Query: 1674 HKFLEKTKKKNVSNKDLDDESDTVTKQQEKLRKKVTILMKKQRRHQVRGIVKEHDDTKPW 1495
H+FLEKTKK N + DL+D + K++E+LRKKV ILMKKQ+ QVR IVK+ DD KPW
Sbjct: 291 HRFLEKTKKSNALSGDLEDTPGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPW 350
Query: 1494 GQDAQAKVGSRVIQLLIETAYIQPPVDQLEDGPPDIRPAFVHDLKTVDTQRGSRRYGVIE 1315
GQD KVG R+IQ+L+ETAYIQPP DQL+D PPDIRPAFVH LKTV+T +GSRRYGVI+
Sbjct: 351 GQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQ 410
Query: 1314 CDPLVRRGLEKTARHMVIPYMPMLVPPLNWTGYDRGAHLFLPSYIMRTHGAKQQRNAVKR 1135
CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYD+GA+LFLPSYIMRTHGAKQQR AVKR
Sbjct: 411 CDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKR 470
Query: 1134 VPTKQMEPIYKALDTLGSTKWRVNKRVLGIVDRIWASGGRLADLVDREDVPLLEEPDTKD 955
VP KQ+EP+++ALDTLG+TKWR+N++VLGIVDRIWASGGRLADLVDREDVPL EEPD +D
Sbjct: 471 VPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAED 530
Query: 954 EAEIXXXXXXXXXXXXVNIERHSQRCDVELKLAVSRKMRDEDGFFYPHNLDFRGRAYPMH 775
EA+I N ERHSQRCD+ELKLAV+RKM+DEDGF+YPHNLDFRGRAYPMH
Sbjct: 531 EAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 590
Query: 774 PYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVDKLSYESRIAFTESHLD 595
PYLNHLGSDLCRGILEFAEGRPLGKSGL WLKIHLAN+YGGGVDKLSYE R+AF+E+H++
Sbjct: 591 PYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVE 650
Query: 594 DIFDSADRPLEGKRWWLSAEDPFQCLATCINLTEVLRSSSPETTLSYIPIHQDGSCNGLQ 415
DIFDSA+RPLEGKRWWL AEDPFQCLATCIN+ E LRS SPET +SY+PIHQDGSCNGLQ
Sbjct: 651 DIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQ 710
Query: 414 HYAALGRDKLGAAAVNLVTGEKPADVYSGIADRVLDIMRRDAEKDPATNPNVLRAKLLLN 235
HYAALGRD LGAAAVNLV G+KPADVYSGIA RVLDIM+RDA KDPA +PNV+RA+LL+N
Sbjct: 711 HYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLIN 770
Query: 234 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDTELFAAACYAAKTTLIALGE 55
QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDD ELFAAACYAAKTTL ALGE
Sbjct: 771 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGE 830
Query: 54 MFEAARSIMSWLGECAKV 1
MFEAARSIMSWLG+CAK+
Sbjct: 831 MFEAARSIMSWLGDCAKI 848
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 1136 bits (2939), Expect = 0.0
Identities = 555/738 (75%), Positives = 627/738 (84%), Gaps = 8/738 (1%)
Frame = -3
Query: 2190 KGYASVAQAVVCTEXXXXXDEVQELLQEMKKENKV--------PPKLVGGMGQGKYAMLR 2035
+ Y S A+A+V T E+QEL++EM KEN+ PK +GGMG GKY LR
Sbjct: 112 RSYGSAAEAIVSTSEEDID-EIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLR 170
Query: 2034 KRQIKMETEAWEEAAREYQELLEDMCEHNLAPNLPYMKSLFLGWFEPFKNAIVAEQELCM 1855
+RQIK+ETEAWEEAA+EYQELL DMCE LAPNLPYMKSLFLGWFEP ++AI AEQ+LC
Sbjct: 171 RRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCD 230
Query: 1854 EGKNQVSHAPYFDQLPADMMAVITXXXXXXXXXXXXXXGCCRVVHAACQIGEAIEQEVRI 1675
EGKN+ ++AP+FDQLPA+MMAVIT G RVV AA IGEAIE E RI
Sbjct: 231 EGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARI 290
Query: 1674 HKFLEKTKKKNVSNKDLDDESDTVTKQQEKLRKKVTILMKKQRRHQVRGIVKEHDDTKPW 1495
H+FLEKTKK N + DL++ + K++E+LRKKV ILMKKQ+ QVR IVK+ DD KPW
Sbjct: 291 HRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPW 350
Query: 1494 GQDAQAKVGSRVIQLLIETAYIQPPVDQLEDGPPDIRPAFVHDLKTVDTQRGSRRYGVIE 1315
GQD KVG R+IQ+L+ETAYIQPP DQL+DGPPDIRPAFVH LKTV+T +GSRRYGVI+
Sbjct: 351 GQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQ 410
Query: 1314 CDPLVRRGLEKTARHMVIPYMPMLVPPLNWTGYDRGAHLFLPSYIMRTHGAKQQRNAVKR 1135
CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYD+G +LFLPSYIMRTHGAKQQR AVKR
Sbjct: 411 CDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKR 470
Query: 1134 VPTKQMEPIYKALDTLGSTKWRVNKRVLGIVDRIWASGGRLADLVDREDVPLLEEPDTKD 955
VP KQ+EP+++ALDTLG+TKWRVN++VLGIV+RIWASGGRLADLVDREDVPL E PDT+D
Sbjct: 471 VPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPEAPDTED 530
Query: 954 EAEIXXXXXXXXXXXXVNIERHSQRCDVELKLAVSRKMRDEDGFFYPHNLDFRGRAYPMH 775
EAEI N ERHSQRCD+ELKLAV+RKM+DEDGF+YPHNLDFRGRAYPMH
Sbjct: 531 EAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 590
Query: 774 PYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVDKLSYESRIAFTESHLD 595
PYLNHLGSDLCRGILEFAEGRPLG SGL WLKIHLAN+YGGGVDKLSYE R+AF+E+HL+
Sbjct: 591 PYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLE 650
Query: 594 DIFDSADRPLEGKRWWLSAEDPFQCLATCINLTEVLRSSSPETTLSYIPIHQDGSCNGLQ 415
DIFDSA+RPLEGKRWWL AEDPFQCLATCIN+ E LRS SPET +SY+PIHQDGSCNGLQ
Sbjct: 651 DIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQ 710
Query: 414 HYAALGRDKLGAAAVNLVTGEKPADVYSGIADRVLDIMRRDAEKDPATNPNVLRAKLLLN 235
HYAALGRDKLGAAAVNLV G+KPADVYSGIA RVLDIM+RDA KDPA +PNV+RA+LL+N
Sbjct: 711 HYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLIN 770
Query: 234 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDTELFAAACYAAKTTLIALGE 55
QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERGVIEDD ELFAAACYAAKTTL ALGE
Sbjct: 771 QVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGE 830
Query: 54 MFEAARSIMSWLGECAKV 1
MFEAARSIMSWLG+CAK+
Sbjct: 831 MFEAARSIMSWLGDCAKI 848
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1135 bits (2937), Expect = 0.0
Identities = 553/738 (74%), Positives = 627/738 (84%), Gaps = 8/738 (1%)
Frame = -3
Query: 2190 KGYASVAQAVVCTEXXXXXDEVQELLQEMKKENKV--------PPKLVGGMGQGKYAMLR 2035
+ Y S A+A+ T E+QEL++EM KEN+ PK +GGMG GKY +LR
Sbjct: 112 RSYGSAAEAIASTSEEDID-EIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLR 170
Query: 2034 KRQIKMETEAWEEAAREYQELLEDMCEHNLAPNLPYMKSLFLGWFEPFKNAIVAEQELCM 1855
+RQIK+ETEAWEEAA+EYQELL DMCE LAPNLPYMKSLFLGWFEP ++AI AEQ+LC
Sbjct: 171 RRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCD 230
Query: 1854 EGKNQVSHAPYFDQLPADMMAVITXXXXXXXXXXXXXXGCCRVVHAACQIGEAIEQEVRI 1675
EGKN+ ++AP+FDQLPA+MMAVIT G RVV AA IGEAIE E RI
Sbjct: 231 EGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARI 290
Query: 1674 HKFLEKTKKKNVSNKDLDDESDTVTKQQEKLRKKVTILMKKQRRHQVRGIVKEHDDTKPW 1495
H+FLEKTKK N + DL+D + K++E++RKKV ILMKKQ+ QVR IVK+ DD KPW
Sbjct: 291 HRFLEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPW 350
Query: 1494 GQDAQAKVGSRVIQLLIETAYIQPPVDQLEDGPPDIRPAFVHDLKTVDTQRGSRRYGVIE 1315
GQD KVG R+IQ+L+ETAYIQPP DQL+D PPDIRPAFVH LKTV+T +GSRRYGVI+
Sbjct: 351 GQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQ 410
Query: 1314 CDPLVRRGLEKTARHMVIPYMPMLVPPLNWTGYDRGAHLFLPSYIMRTHGAKQQRNAVKR 1135
CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYD+GA+LFLPSYIMRTHGAKQQR AVKR
Sbjct: 411 CDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKR 470
Query: 1134 VPTKQMEPIYKALDTLGSTKWRVNKRVLGIVDRIWASGGRLADLVDREDVPLLEEPDTKD 955
VP KQ+EP+++ALDTLG+TKWR+N++VLGIVDRIWASGGRLADLVDREDVPL EEPD +D
Sbjct: 471 VPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAED 530
Query: 954 EAEIXXXXXXXXXXXXVNIERHSQRCDVELKLAVSRKMRDEDGFFYPHNLDFRGRAYPMH 775
EA+I N ERHSQRCD+ELKLAV+RKM+DEDGF+YPHNLDFRGRAYPMH
Sbjct: 531 EAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 590
Query: 774 PYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVDKLSYESRIAFTESHLD 595
PYLNHLGSDLCRGILEFAEGRPLGKSGL WLKIHLAN+YGGGVDKLSYE R+AF+E+H++
Sbjct: 591 PYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVE 650
Query: 594 DIFDSADRPLEGKRWWLSAEDPFQCLATCINLTEVLRSSSPETTLSYIPIHQDGSCNGLQ 415
DIFDSA+RPLEGKRWWL AEDPFQCLATCIN+ E LRS SPET +SY+PIHQDGSCNGLQ
Sbjct: 651 DIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQ 710
Query: 414 HYAALGRDKLGAAAVNLVTGEKPADVYSGIADRVLDIMRRDAEKDPATNPNVLRAKLLLN 235
HYAALGRD LGAAAVNLV G+KPADVYSGIA RVLDIM+RDA KDPA +PNV+RA+LL+N
Sbjct: 711 HYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLIN 770
Query: 234 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDTELFAAACYAAKTTLIALGE 55
QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDD ELFAAACYAAKTTL ALGE
Sbjct: 771 QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGE 830
Query: 54 MFEAARSIMSWLGECAKV 1
MFEAARSIMSWLG+CAK+
Sbjct: 831 MFEAARSIMSWLGDCAKI 848