BLASTX nr result

ID: Panax21_contig00014035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014035
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312289.1| predicted protein [Populus trichocarpa] gi|2...   257   3e-66
ref|XP_004144165.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   256   4e-66
ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   255   9e-66
ref|XP_003518783.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   249   6e-64
ref|XP_002512060.1| glycine-rich RNA-binding protein, putative [...   249   8e-64

>ref|XP_002312289.1| predicted protein [Populus trichocarpa] gi|222852109|gb|EEE89656.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  257 bits (656), Expect = 3e-66
 Identities = 131/168 (77%), Positives = 137/168 (81%)
 Frame = -1

Query: 837 QQVQKNTLYVGGLAEEVNEGILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDA 658
           QQVQKNTLYVGGLAEEVNE ILHA FIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDA
Sbjct: 5   QQVQKNTLYVGGLAEEVNEAILHATFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDA 64

Query: 657 SAAMDNLDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFXXXXXXXXXXXXX 478
           ++AMDN+DGAELYGRVLTVNYALPE+IKGGEQGWAAQPIWADADTWF             
Sbjct: 65  ASAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEEMQRMQ 124

Query: 477 XENRAAMDAAEELHRKKMAXXXXXXXXXXXESKDDHMVMAEAEVLKQN 334
            ENRAAM+AAEELHRKKMA           + KDD M  AEAEVLKQN
Sbjct: 125 AENRAAMEAAEELHRKKMAEEREGEKEDEGQVKDDPMARAEAEVLKQN 172


>ref|XP_004144165.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cucumis
           sativus] gi|449529401|ref|XP_004171688.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase E-like [Cucumis
           sativus]
          Length = 171

 Score =  256 bits (655), Expect = 4e-66
 Identities = 132/171 (77%), Positives = 139/171 (81%)
 Frame = -1

Query: 843 MNQQVQKNTLYVGGLAEEVNEGILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE 664
           M Q VQKNTLYVGGLAEEVNE ILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+E
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 663 DASAAMDNLDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFXXXXXXXXXXX 484
           DASAAMDN+DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWF           
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 483 XXXENRAAMDAAEELHRKKMAXXXXXXXXXXXESKDDHMVMAEAEVLKQNS 331
              ENRAAM+AAEELHRKK+A           ++K D M  AEAEVL+QNS
Sbjct: 121 LQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTKVDPMAKAEAEVLRQNS 171


>ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Vitis vinifera]
           gi|297743796|emb|CBI36679.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  255 bits (652), Expect = 9e-66
 Identities = 131/171 (76%), Positives = 137/171 (80%)
 Frame = -1

Query: 843 MNQQVQKNTLYVGGLAEEVNEGILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE 664
           MNQ VQKNTLYVGGLAEEVNE ILH+AFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+E
Sbjct: 1   MNQPVQKNTLYVGGLAEEVNESILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 663 DASAAMDNLDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFXXXXXXXXXXX 484
           DA+AAMDN+DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWF           
Sbjct: 61  DAAAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 483 XXXENRAAMDAAEELHRKKMAXXXXXXXXXXXESKDDHMVMAEAEVLKQNS 331
              ENRAAM AAEELHRKKMA           E KDD M   EAEVL Q++
Sbjct: 121 IQAENRAAMQAAEELHRKKMAQEREGEKDEEVEGKDDPMARVEAEVLNQSN 171


>ref|XP_003518783.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max]
          Length = 172

 Score =  249 bits (636), Expect = 6e-64
 Identities = 129/168 (76%), Positives = 135/168 (80%)
 Frame = -1

Query: 843 MNQQVQKNTLYVGGLAEEVNEGILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE 664
           M Q VQKNTLYVGGLAEEVNE ILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE
Sbjct: 3   MMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE 62

Query: 663 DASAAMDNLDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFXXXXXXXXXXX 484
           DASAAMDN+DGAELYGRVLTVNYALPERIKGGEQGWAAQP+WADADTWF           
Sbjct: 63  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFERQQQEEEMKR 122

Query: 483 XXXENRAAMDAAEELHRKKMAXXXXXXXXXXXESKDDHMVMAEAEVLK 340
              ENRAAM AAE+LHRK++A           E KDD M  AEAEVL+
Sbjct: 123 IEAENRAAMQAAEDLHRKQVAEQREGEKEEEIEIKDDPMAKAEAEVLQ 170


>ref|XP_002512060.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223549240|gb|EEF50729.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 176

 Score =  249 bits (635), Expect = 8e-64
 Identities = 127/172 (73%), Positives = 137/172 (79%)
 Frame = -1

Query: 849 KRMNQQVQKNTLYVGGLAEEVNEGILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 670
           +++ QQVQKNTLYVGGLA+EVNE ILHAAFIPFGDIKDVKTPLDQATQKHR+FGFVTFLE
Sbjct: 3   QQLLQQVQKNTLYVGGLADEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRAFGFVTFLE 62

Query: 669 REDASAAMDNLDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFXXXXXXXXX 490
           +EDA+AAMDN+DGAELYGRVLTVNYALPE+IKGGEQGWAAQPIW DADTWF         
Sbjct: 63  KEDAAAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWKDADTWFERQRHQEEM 122

Query: 489 XXXXXENRAAMDAAEELHRKKMAXXXXXXXXXXXESKDDHMVMAEAEVLKQN 334
                EN+A M AAEELHRKKMA           E KDD M  AEAEV KQN
Sbjct: 123 ERIQAENKATMQAAEELHRKKMAQEREGEKEDEMEVKDDPMARAEAEVSKQN 174


Top