BLASTX nr result

ID: Panax21_contig00014029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014029
         (1757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...   630   e-178
ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...   617   e-174
ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interactin...   579   e-163
ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|2...   556   e-156
ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interactin...   553   e-155

>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
            [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
            protein product [Vitis vinifera]
          Length = 519

 Score =  630 bits (1626), Expect = e-178
 Identities = 329/507 (64%), Positives = 382/507 (75%), Gaps = 8/507 (1%)
 Frame = -2

Query: 1753 KRFSIQQDPFFDNDSKRRRXXXXXXXXXXXXXXXXXXXDAISG--------KXXXXXXXX 1598
            KRFSI +D FF ++SKRRR                   +  +G        +        
Sbjct: 20   KRFSIDEDSFFRHESKRRRKAKDEDAEDDIIESEEEDDEEGTGSDADGLEERQEEDEFAA 79

Query: 1597 XXXXEKRKRIAEAYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVANILQQEQLE 1418
                EKR R+A+AY+                                  VA ILQQEQLE
Sbjct: 80   ETADEKRLRVAKAYVEKIRGIVSREREDEEESERAEEREGQRDSL----VAQILQQEQLE 135

Query: 1417 DSGRVRRLIASRLQKPETTEGFQVLVKHWQSVTAVALSEDDLRGYSASKDGTIVHWNIES 1238
            +SGRVRRLIASR+QKPET + F+VLVKH QSVTAVALSEDDL+G+SASKDGTIV W+++S
Sbjct: 136  ESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKDGTIVQWDVDS 195

Query: 1237 GKSEKYAWPSDEVLKSHGVKDPQGRAVKHSKHVLALALSSDGRYLASGGLDRHIHLWDTR 1058
            GK EKY WP++EVLKSHG KDPQGRA+KHSKHVLALA+SSDGRYLASGG DRH+HLWDTR
Sbjct: 196  GKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDGRYLASGGFDRHVHLWDTR 255

Query: 1057 SREHIQAFPGHKGPVSCLTFRQGTSELFSGSFDRTIKVWNAEDRAYITTLFGHQSDVLNI 878
            +REH++AFPGH+GPVSCLTFRQGTSELFSGSFDRTIK+W+AEDRAYIT+LFGHQS+VL+I
Sbjct: 256  TREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSLFGHQSEVLSI 315

Query: 877  DCLRKERVLTVGRDRTMHLWKVPEESQLIYRAPASSLECCCFISNDEFLSGSDDGSIEQW 698
            DCLRKERVLTVGRDR+M LWKVPEES+L++RAPASSLECCCFI+NDEFLSGSDDGSIE W
Sbjct: 316  DCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLSGSDDGSIELW 375

Query: 697  SVLRKKPVHIVRSAHALQAPDKLEQSGNEGLLNGHIGTITAGNSVHSPENLCVSAHSWVG 518
             +LRKKPV+IV++AHAL A  +  +  + G +    G I  GN  H   N C +A+SWV 
Sbjct: 376  GMLRKKPVYIVKNAHALSATLRQPEQSDVGKIPN--GYIENGNHNHEDYN-CSTAYSWVS 432

Query: 517  SVAVCRSSDLAASGAGNGSIRLWQIESDSKSIRPLFELPQVGFVNSLAFAKSGRFLVAGV 338
            SV VCRSSDLAASGA NGS+RLW I S++K IRPLF LP VGFVNSLAF+KSG+FLVAGV
Sbjct: 433  SVTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGV 492

Query: 337  GQEPRLGRWGCLSAARNGVAVHSLQLS 257
            GQEPRLGRWG L AARNGVAV SL+LS
Sbjct: 493  GQEPRLGRWGRLPAARNGVAVQSLKLS 519


>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
            [Vitis vinifera]
          Length = 500

 Score =  617 bits (1591), Expect = e-174
 Identities = 324/509 (63%), Positives = 375/509 (73%), Gaps = 10/509 (1%)
 Frame = -2

Query: 1753 KRFSIQQDPFFDNDSKRRRXXXXXXXXXXXXXXXXXXXDAISG--------KXXXXXXXX 1598
            KRFSI +D FF ++SKRRR                   +  +G        +        
Sbjct: 20   KRFSIDEDSFFRHESKRRRKAKDEDAEDDIIESEEEDDEEGTGSDADGLEERQEEDEFAA 79

Query: 1597 XXXXEKRKRIAEAYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVANILQQEQLE 1418
                EKR R+A+AY+                                  VA ILQQEQLE
Sbjct: 80   ETADEKRLRVAKAYVEKIRGIVSREREDEEESERAEEREGQRDSL----VAQILQQEQLE 135

Query: 1417 DSGRVRRLIASRLQKPETTEGFQVLVKHWQSVTAVALSEDDLRGYSASKDGTIVHWNIES 1238
            +SGRVRRLIASR+QKPET + F+VLVKH QSVTAVALSEDDL+G+SASKDGTIV W+++S
Sbjct: 136  ESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKDGTIVQWDVDS 195

Query: 1237 GKSEKYAWPSDEVLKSHGVKDPQGRAVKHSKHVLALALSSDGRYLASGGLDRHIHLWDTR 1058
            GK EKY WP++EVLKSHG KDPQGRA+KHSKHVLALA+SSDGRYLASGG DRH+HLWDTR
Sbjct: 196  GKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDGRYLASGGFDRHVHLWDTR 255

Query: 1057 SREHIQAFPGHKGPVSCLTFRQGTSELFSGSFDRTIKVWNAEDRAYITTLFGHQSDVLNI 878
            +REH++AFPGH+GPVSCLTFRQGTSELFSGSFDRTIK+W+AEDRAYIT+LFGHQS+VL+I
Sbjct: 256  TREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSLFGHQSEVLSI 315

Query: 877  DCLRKERVLTVGRDRTMHLWKVPEESQLIYRAPASSLECCCFISNDEFLSGSDDGSIEQW 698
            DCLRKERVLTVGRDR+M LWKVPEES+L++RAPASSLECCCFI+NDEFLSGSDDGSIE W
Sbjct: 316  DCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLSGSDDGSIELW 375

Query: 697  SVLRKKPVHIVRSAHALQAPDKLEQSGNEGLLNGHIGTITAGNSVHSPEN--LCVSAHSW 524
             +LRKKPV+IV++AHAL A                        ++  PE    C +A+SW
Sbjct: 376  GMLRKKPVYIVKNAHALSA------------------------TLRQPEQNYNCSTAYSW 411

Query: 523  VGSVAVCRSSDLAASGAGNGSIRLWQIESDSKSIRPLFELPQVGFVNSLAFAKSGRFLVA 344
            V SV VCRSSDLAASGA NGS+RLW I S++K IRPLF LP VGFVNSLAF+KSG+FLVA
Sbjct: 412  VSSVTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNSLAFSKSGQFLVA 471

Query: 343  GVGQEPRLGRWGCLSAARNGVAVHSLQLS 257
            GVGQEPRLGRWG L AARNGVAV SL+LS
Sbjct: 472  GVGQEPRLGRWGRLPAARNGVAVQSLKLS 500


>ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Cucumis
            sativus]
          Length = 494

 Score =  579 bits (1492), Expect = e-163
 Identities = 299/500 (59%), Positives = 358/500 (71%), Gaps = 1/500 (0%)
 Frame = -2

Query: 1753 KRFSIQQDPFFDNDSKRRRXXXXXXXXXXXXXXXXXXXDAISGKXXXXXXXXXXXXEKRK 1574
            K F + +DPFF ++S++RR                        +             KRK
Sbjct: 17   KNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLMGVEDEEFEEETVDE-----KRK 71

Query: 1573 RIAEAYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVANILQQEQLEDSGRVRRL 1394
            R+A  YL                                  VA ILQQEQLEDSGR+RR 
Sbjct: 72   RVAVEYLEKIREIAKREKERGDEEKDEDESDDEGEKDSL--VAKILQQEQLEDSGRLRRE 129

Query: 1393 IASRLQKPETTEGFQVLVKHWQSVTAVALSEDDLRGYSASKDGTIVHWNIESGKSEKYAW 1214
            IASR+QKP   + FQ+L+KH QSVTAVALSEDDL+G+S+SKDGTI+HW++ESGK EKY W
Sbjct: 130  IASRVQKPVARDEFQLLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVESGKGEKYRW 189

Query: 1213 PSDEVLKSHGVKDPQGRAVKHSKHVLALALSSDGRYLASGGLDRHIHLWDTRSREHIQAF 1034
            PSDEVL+ HG KDPQGRA KHSK   +LA+SSDGRYLASGGLDRH+H+WDTR+REHIQAF
Sbjct: 190  PSDEVLRLHGAKDPQGRATKHSKVTFSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQAF 249

Query: 1033 PGHKGPVSCLTFRQGTSELFSGSFDRTIKVWNAEDRAYITTLFGHQSDVLNIDCLRKERV 854
            PGH+GPVSCLTFRQGTSELFSGS+DRT+K+WN +DRAYI TLFGHQSDVL IDCLRKER+
Sbjct: 250  PGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVLTIDCLRKERL 309

Query: 853  LTVGRDRTMHLWKVPEESQLIYRAPASSLECCCFISNDEFLSGSDDGSIEQWSVLRKKPV 674
            LTVGRDR+M LWKVPEES+L++RAPASSLECCCFISNDEFLSGSDDGSIE W+ L+KKPV
Sbjct: 310  LTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPV 369

Query: 673  HIVRSAHALQAPD-KLEQSGNEGLLNGHIGTITAGNSVHSPENLCVSAHSWVGSVAVCRS 497
             IVR+AH+  +    LE   N  + NG +G    G++ H+  +  +SA+SW+ SV+VCR+
Sbjct: 370  FIVRNAHSSSSSSTNLELKENGAIPNGCMGN---GDANHNTSH-NLSAYSWISSVSVCRN 425

Query: 496  SDLAASGAGNGSIRLWQIESDSKSIRPLFELPQVGFVNSLAFAKSGRFLVAGVGQEPRLG 317
            SDLAASGAGNGS+RLW + SD K +RPL++LP             GRF+VAGVGQEPRLG
Sbjct: 426  SDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLF-----------GRFVVAGVGQEPRLG 474

Query: 316  RWGCLSAARNGVAVHSLQLS 257
            RWG + AARNGVAVH L+LS
Sbjct: 475  RWGRIPAARNGVAVHPLKLS 494


>ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|222855688|gb|EEE93235.1|
            predicted protein [Populus trichocarpa]
          Length = 502

 Score =  556 bits (1433), Expect = e-156
 Identities = 269/398 (67%), Positives = 326/398 (81%), Gaps = 1/398 (0%)
 Frame = -2

Query: 1450 VANILQQEQLEDSGRVRRLIASRLQKPETTEGFQVLVKHWQSVTAVALSEDDLRGYSASK 1271
            VA  L Q+QLE+SGR+RR IASR+QKPE+ +GF+VLVKH QSVTAV LS+DD +G+SASK
Sbjct: 122  VAKKLMQQQLEESGRLRRAIASRVQKPESVDGFEVLVKHRQSVTAVCLSDDDSKGFSASK 181

Query: 1270 DGTIVHWNIESGKSEKYAWPSDEVLKSHGVKDPQGRAVKHSKHVLALALSSDGRYLASGG 1091
            DGTI+HW+++SGK+EKY WP+DE+L+SHG K+P+GRA KHS++VLALA+S+DGRYLASGG
Sbjct: 182  DGTILHWDVDSGKAEKYQWPNDEILRSHGAKNPEGRATKHSRNVLALAVSTDGRYLASGG 241

Query: 1090 LDRHIHLWDTRSREHIQAFPGHKGPVSCLTFRQGTSELFSGSFDRTIKVWNAEDRAYITT 911
            LDRH+HLWDTR+REHIQAFPGHKGPVSCLTFR+G+SELFSGS+DR+IK+WN EDRAY+ T
Sbjct: 242  LDRHVHLWDTRTREHIQAFPGHKGPVSCLTFRKGSSELFSGSYDRSIKIWNVEDRAYMNT 301

Query: 910  LFGHQSDVLNIDCLRKERVLTVGRDRTMHLWKVPEESQLIYRAPASSLECCCFISNDEFL 731
            LFGHQS++L IDCL +ERVL VGRDR+M L+KV +ES+LI+R+  SSLECCCFI N EF+
Sbjct: 302  LFGHQSELLTIDCLWQERVLAVGRDRSMQLFKVHDESRLIFRSSTSSLECCCFIDNSEFV 361

Query: 730  SGSDDGSIEQWSVLRKKPVHIVRSAHALQAP-DKLEQSGNEGLLNGHIGTITAGNSVHSP 554
            SGSDDG+IE WSV +KKPV+IV++AH      +  E   N    NGH+            
Sbjct: 362  SGSDDGNIELWSVQKKKPVYIVKNAHTSSTDVNNGELKDNGRNYNGHV------------ 409

Query: 553  ENLCVSAHSWVGSVAVCRSSDLAASGAGNGSIRLWQIESDSKSIRPLFELPQVGFVNSLA 374
                  A SWV SV VCR SDLAASGAGNGS+RLW +E   K IRPL++LP  GFVNSLA
Sbjct: 410  ------ASSWVSSVGVCRGSDLAASGAGNGSVRLWAVEGAGKGIRPLYDLPLTGFVNSLA 463

Query: 373  FAKSGRFLVAGVGQEPRLGRWGCLSAARNGVAVHSLQL 260
            FAKSG+FL+AGVGQEPRLGRWG  SAARNGVA+  L+L
Sbjct: 464  FAKSGKFLLAGVGQEPRLGRWGHNSAARNGVAIQQLKL 501


>ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like isoform
            1 [Glycine max]
          Length = 496

 Score =  553 bits (1425), Expect = e-155
 Identities = 272/398 (68%), Positives = 327/398 (82%), Gaps = 1/398 (0%)
 Frame = -2

Query: 1450 VANILQQEQLEDSGRVRRLIASRLQKPETTEGFQVLVKHWQSVTAVALSEDDLRGYSASK 1271
            VA  L +EQ E+SGRVRR +ASR+ K    EGF+VL KH  SVTAVALSEDD +G+SASK
Sbjct: 104  VAQKLLKEQNEESGRVRRSLASRV-KVSGDEGFRVLAKHRHSVTAVALSEDDSKGFSASK 162

Query: 1270 DGTIVHWNIESGKSEKYAWPSDEVLKSHGVKDPQGRAVKHSKHVLALALSSDGRYLASGG 1091
            DGTI+ W++ SG+ E+Y WPSD VLKSHG+KDPQG A + SK VLALA SSDGRYLA+GG
Sbjct: 163  DGTIMQWDVNSGQCERYKWPSDSVLKSHGLKDPQGSATRQSKQVLALAASSDGRYLATGG 222

Query: 1090 LDRHIHLWDTRSREHIQAFPGHKGPVSCLTFRQGTSELFSGSFDRTIKVWNAEDRAYITT 911
            LDRHIH+WDTR+REH+Q+FPGH+GPVSCLTFRQGTSELFSGSFDRTIK+WN EDR Y++T
Sbjct: 223  LDRHIHIWDTRTREHLQSFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWNVEDRTYMST 282

Query: 910  LFGHQSDVLNIDCLRKERVLTVGRDRTMHLWKVPEESQLIYRAPASSLECCCFISNDEFL 731
            LFGHQS+VL+IDCLRKERVLT GRDR+M L+KV EES+L++RAPASSLECCCF+ NDE  
Sbjct: 283  LFGHQSEVLSIDCLRKERVLTAGRDRSMQLFKVHEESRLVFRAPASSLECCCFVGNDELF 342

Query: 730  SGSDDGSIEQWSVLRKKPVHIVRSAHALQAPD-KLEQSGNEGLLNGHIGTITAGNSVHSP 554
            SGSDDGSIE W+V+RKKP++I+R+AHAL     K +Q  +E L NG++         H  
Sbjct: 343  SGSDDGSIELWTVMRKKPIYILRNAHALPVDSMKSDQKDSEKLPNGNL----ENGYNHPK 398

Query: 553  ENLCVSAHSWVGSVAVCRSSDLAASGAGNGSIRLWQIESDSKSIRPLFELPQVGFVNSLA 374
            ++ C+S  SWV +V+VCR+SDLAASGAGNGS+RLW+IESD+K I+ L  +P  GFVNSLA
Sbjct: 399  DHHCLSVFSWVSAVSVCRNSDLAASGAGNGSVRLWEIESDTKDIKSLCNVPLAGFVNSLA 458

Query: 373  FAKSGRFLVAGVGQEPRLGRWGCLSAARNGVAVHSLQL 260
            FAKSG FLVAGVGQEPRLGRWG    ARNGV++  L+L
Sbjct: 459  FAKSGEFLVAGVGQEPRLGRWGRNPEARNGVSILPLKL 496


Top