BLASTX nr result
ID: Panax21_contig00014026
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014026 (500 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ... 258 5e-67 ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 256 1e-66 emb|CBI26203.3| unnamed protein product [Vitis vinifera] 256 1e-66 ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|2... 253 1e-65 gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i... 241 4e-62 >ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 476 Score = 258 bits (658), Expect = 5e-67 Identities = 120/153 (78%), Positives = 142/153 (92%) Frame = -2 Query: 460 VDFMFNSSKQISSVRKLLTSYSTRNTRQTIFASASVPQHRRFLYDCIQQKWTKADVVHVH 281 VDFMFNSSKQ+SS+RKLLTSYS+ N+RQT+FASAS+PQHRRFLYDCIQQKWTK+D VHVH Sbjct: 237 VDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHRRFLYDCIQQKWTKSDAVHVH 296 Query: 280 VNPIEPMPSRLHHRFVICGKNERHSTLLSLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTT 101 +NP++PMPS L HRFVIC KN+RH LLSLLQ DAP+S I+FVGEQSEKSKKAG+APPTT Sbjct: 297 INPVQPMPSCLQHRFVICSKNQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKAGHAPPTT 356 Query: 100 ILIDLLKSSHAGCSDILLLDDDMNFNLRAASLS 2 +L+D L++S++ CSDILLL++DMNFNLRAASLS Sbjct: 357 LLVDFLETSYSDCSDILLLEEDMNFNLRAASLS 389 >ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like [Vitis vinifera] Length = 482 Score = 256 bits (654), Expect = 1e-66 Identities = 123/153 (80%), Positives = 137/153 (89%) Frame = -2 Query: 460 VDFMFNSSKQISSVRKLLTSYSTRNTRQTIFASASVPQHRRFLYDCIQQKWTKADVVHVH 281 VDFMFN+SKQ+ S+RKLLTSYS+ N RQT+FASAS+PQHRRFL+DCIQQKWTK+DVVHVH Sbjct: 239 VDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVH 298 Query: 280 VNPIEPMPSRLHHRFVICGKNERHSTLLSLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTT 101 VNPIEPMPS LHHRFVIC K ER TLLSLL SDAP+ IIFVGEQSEKSKKAGNAP T Sbjct: 299 VNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSAT 358 Query: 100 ILIDLLKSSHAGCSDILLLDDDMNFNLRAASLS 2 +LID LK+S+ GC DILLL++DMNFNLRAASLS Sbjct: 359 LLIDFLKTSYGGCPDILLLEEDMNFNLRAASLS 391 >emb|CBI26203.3| unnamed protein product [Vitis vinifera] Length = 486 Score = 256 bits (654), Expect = 1e-66 Identities = 123/153 (80%), Positives = 137/153 (89%) Frame = -2 Query: 460 VDFMFNSSKQISSVRKLLTSYSTRNTRQTIFASASVPQHRRFLYDCIQQKWTKADVVHVH 281 VDFMFN+SKQ+ S+RKLLTSYS+ N RQT+FASAS+PQHRRFL+DCIQQKWTK+DVVHVH Sbjct: 243 VDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVH 302 Query: 280 VNPIEPMPSRLHHRFVICGKNERHSTLLSLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTT 101 VNPIEPMPS LHHRFVIC K ER TLLSLL SDAP+ IIFVGEQSEKSKKAGNAP T Sbjct: 303 VNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSAT 362 Query: 100 ILIDLLKSSHAGCSDILLLDDDMNFNLRAASLS 2 +LID LK+S+ GC DILLL++DMNFNLRAASLS Sbjct: 363 LLIDFLKTSYGGCPDILLLEEDMNFNLRAASLS 395 >ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|222864832|gb|EEF01963.1| predicted protein [Populus trichocarpa] Length = 310 Score = 253 bits (646), Expect = 1e-65 Identities = 122/153 (79%), Positives = 137/153 (89%) Frame = -2 Query: 460 VDFMFNSSKQISSVRKLLTSYSTRNTRQTIFASASVPQHRRFLYDCIQQKWTKADVVHVH 281 VDFMFNSSKQ+SS+RKLLTSYS+ N+RQT+FASAS+PQH RFLYDCIQQKWTK DVVHVH Sbjct: 71 VDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFLYDCIQQKWTKRDVVHVH 130 Query: 280 VNPIEPMPSRLHHRFVICGKNERHSTLLSLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTT 101 VNPIEPMP+ L HRFVIC K +RH TLLSLLQSDAP+S IIFVGEQSEKSKKAGN PPT Sbjct: 131 VNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAGNGPPTI 190 Query: 100 ILIDLLKSSHAGCSDILLLDDDMNFNLRAASLS 2 L+D LK+S+ CS+ILLL++DMNFN RAASLS Sbjct: 191 DLVDFLKTSYGDCSEILLLEEDMNFNSRAASLS 223 >gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum] gi|11385590|gb|AAG34876.1|AF261021_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum] Length = 466 Score = 241 bits (615), Expect = 4e-62 Identities = 116/153 (75%), Positives = 134/153 (87%) Frame = -2 Query: 460 VDFMFNSSKQISSVRKLLTSYSTRNTRQTIFASASVPQHRRFLYDCIQQKWTKADVVHVH 281 VDFMFNSSK+ISS+++LLTSYST RQTIFASAS+PQHRRFLYDC+QQKWTKADVVHVH Sbjct: 227 VDFMFNSSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVH 286 Query: 280 VNPIEPMPSRLHHRFVICGKNERHSTLLSLLQSDAPQSAIIFVGEQSEKSKKAGNAPPTT 101 VN +EPMPS LHHRFV+C K E++ LLSLLQ D+P+SAIIFV EQSEKSKKAGNAPP T Sbjct: 287 VNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPIT 346 Query: 100 ILIDLLKSSHAGCSDILLLDDDMNFNLRAASLS 2 +L+D L SS G S++ LL++DMNFN RAASLS Sbjct: 347 LLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLS 379