BLASTX nr result
ID: Panax21_contig00014020
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00014020 (510 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAE48710.1| NRAMP family metal transporter [Chengiopanax sci... 118 1e-27 ref|NP_173048.3| metal transporter Nramp6 [Arabidopsis thaliana]... 115 2e-26 gb|AAF18493.1|AC010924_6 Strong similarity to gi|2130080 Nramp1 ... 115 2e-26 gb|AAP22982.1| Nramp6b [Arabidopsis thaliana] 115 2e-26 ref|XP_003546914.1| PREDICTED: metal transporter Nramp6-like [Gl... 115 4e-26 >dbj|BAE48710.1| NRAMP family metal transporter [Chengiopanax sciadophylloides] Length = 537 Score = 118 bits (296), Expect(2) = 1e-27 Identities = 62/71 (87%), Positives = 66/71 (92%), Gaps = 1/71 (1%) Frame = -1 Query: 483 KLLYLNKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALI 307 +++ +KTS KNL AYMGPGFLVSIAYIDPGNFETDL SGAQYKYELLWIILVASCAALI Sbjct: 31 QIIVPDKTSWKNLSAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALI 90 Query: 306 IQSLAANLGVV 274 IQSLAANLGVV Sbjct: 91 IQSLAANLGVV 101 Score = 29.6 bits (65), Expect(2) = 1e-27 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = -3 Query: 508 LIENTDSNQIVVPE 467 LIENTDSNQI+VP+ Sbjct: 23 LIENTDSNQIIVPD 36 >ref|NP_173048.3| metal transporter Nramp6 [Arabidopsis thaliana] gi|30173130|sp|Q9S9N8.2|NRAM6_ARATH RecName: Full=Metal transporter Nramp6; Short=AtNramp6 gi|12666983|emb|CAC28123.1| putative metal transporter [Arabidopsis thaliana] gi|332191269|gb|AEE29390.1| metal transporter Nramp6 [Arabidopsis thaliana] Length = 527 Score = 115 bits (288), Expect(2) = 2e-26 Identities = 59/71 (83%), Positives = 64/71 (90%), Gaps = 1/71 (1%) Frame = -1 Query: 483 KLLYLNKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALI 307 ++L K S KN F+Y+GPGFLVSIAYIDPGNFETDL SGAQYKYELLWIILVASCAAL+ Sbjct: 26 QILVPEKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALV 85 Query: 306 IQSLAANLGVV 274 IQSLAANLGVV Sbjct: 86 IQSLAANLGVV 96 Score = 28.5 bits (62), Expect(2) = 2e-26 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = -3 Query: 508 LIENTDSNQIVVPE 467 LIEN+DSNQI+VPE Sbjct: 18 LIENSDSNQILVPE 31 >gb|AAF18493.1|AC010924_6 Strong similarity to gi|2130080 Nramp1 protein from Oryza sativa and contains a PF|01566 Nramp domain [Arabidopsis thaliana] Length = 522 Score = 115 bits (288), Expect(2) = 2e-26 Identities = 59/71 (83%), Positives = 64/71 (90%), Gaps = 1/71 (1%) Frame = -1 Query: 483 KLLYLNKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALI 307 ++L K S KN F+Y+GPGFLVSIAYIDPGNFETDL SGAQYKYELLWIILVASCAAL+ Sbjct: 26 QILVPEKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALV 85 Query: 306 IQSLAANLGVV 274 IQSLAANLGVV Sbjct: 86 IQSLAANLGVV 96 Score = 28.5 bits (62), Expect(2) = 2e-26 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = -3 Query: 508 LIENTDSNQIVVPE 467 LIEN+DSNQI+VPE Sbjct: 18 LIENSDSNQILVPE 31 >gb|AAP22982.1| Nramp6b [Arabidopsis thaliana] Length = 180 Score = 115 bits (288), Expect(2) = 2e-26 Identities = 59/71 (83%), Positives = 64/71 (90%), Gaps = 1/71 (1%) Frame = -1 Query: 483 KLLYLNKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALI 307 ++L K S KN F+Y+GPGFLVSIAYIDPGNFETDL SGAQYKYELLWIILVASCAAL+ Sbjct: 26 QILVPEKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALV 85 Query: 306 IQSLAANLGVV 274 IQSLAANLGVV Sbjct: 86 IQSLAANLGVV 96 Score = 28.5 bits (62), Expect(2) = 2e-26 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = -3 Query: 508 LIENTDSNQIVVPE 467 LIEN+DSNQI+VPE Sbjct: 18 LIENSDSNQILVPE 31 >ref|XP_003546914.1| PREDICTED: metal transporter Nramp6-like [Glycine max] Length = 546 Score = 115 bits (288), Expect(2) = 4e-26 Identities = 58/66 (87%), Positives = 63/66 (95%), Gaps = 1/66 (1%) Frame = -1 Query: 468 NKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALIIQSLA 292 ++ S KNLFAYMGPGFLVSIAYIDPGNFETDL SGAQYKYELLWIIL+ASCAAL+IQS+A Sbjct: 40 DRRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILLASCAALVIQSMA 99 Query: 291 ANLGVV 274 ANLGVV Sbjct: 100 ANLGVV 105 Score = 27.3 bits (59), Expect(2) = 4e-26 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = -3 Query: 508 LIENTDSNQIVVPE 467 LIEN+D+NQIVVP+ Sbjct: 27 LIENSDTNQIVVPD 40