BLASTX nr result

ID: Panax21_contig00014020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014020
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE48710.1| NRAMP family metal transporter [Chengiopanax sci...   118   1e-27
ref|NP_173048.3| metal transporter Nramp6 [Arabidopsis thaliana]...   115   2e-26
gb|AAF18493.1|AC010924_6 Strong similarity to gi|2130080 Nramp1 ...   115   2e-26
gb|AAP22982.1| Nramp6b [Arabidopsis thaliana]                         115   2e-26
ref|XP_003546914.1| PREDICTED: metal transporter Nramp6-like [Gl...   115   4e-26

>dbj|BAE48710.1| NRAMP family metal transporter [Chengiopanax sciadophylloides]
          Length = 537

 Score =  118 bits (296), Expect(2) = 1e-27
 Identities = 62/71 (87%), Positives = 66/71 (92%), Gaps = 1/71 (1%)
 Frame = -1

Query: 483 KLLYLNKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALI 307
           +++  +KTS KNL AYMGPGFLVSIAYIDPGNFETDL SGAQYKYELLWIILVASCAALI
Sbjct: 31  QIIVPDKTSWKNLSAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALI 90

Query: 306 IQSLAANLGVV 274
           IQSLAANLGVV
Sbjct: 91  IQSLAANLGVV 101



 Score = 29.6 bits (65), Expect(2) = 1e-27
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -3

Query: 508 LIENTDSNQIVVPE 467
           LIENTDSNQI+VP+
Sbjct: 23  LIENTDSNQIIVPD 36


>ref|NP_173048.3| metal transporter Nramp6 [Arabidopsis thaliana]
           gi|30173130|sp|Q9S9N8.2|NRAM6_ARATH RecName: Full=Metal
           transporter Nramp6; Short=AtNramp6
           gi|12666983|emb|CAC28123.1| putative metal transporter
           [Arabidopsis thaliana] gi|332191269|gb|AEE29390.1| metal
           transporter Nramp6 [Arabidopsis thaliana]
          Length = 527

 Score =  115 bits (288), Expect(2) = 2e-26
 Identities = 59/71 (83%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
 Frame = -1

Query: 483 KLLYLNKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALI 307
           ++L   K S KN F+Y+GPGFLVSIAYIDPGNFETDL SGAQYKYELLWIILVASCAAL+
Sbjct: 26  QILVPEKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALV 85

Query: 306 IQSLAANLGVV 274
           IQSLAANLGVV
Sbjct: 86  IQSLAANLGVV 96



 Score = 28.5 bits (62), Expect(2) = 2e-26
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -3

Query: 508 LIENTDSNQIVVPE 467
           LIEN+DSNQI+VPE
Sbjct: 18  LIENSDSNQILVPE 31


>gb|AAF18493.1|AC010924_6 Strong similarity to gi|2130080 Nramp1 protein from Oryza sativa
           and contains a PF|01566 Nramp domain [Arabidopsis
           thaliana]
          Length = 522

 Score =  115 bits (288), Expect(2) = 2e-26
 Identities = 59/71 (83%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
 Frame = -1

Query: 483 KLLYLNKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALI 307
           ++L   K S KN F+Y+GPGFLVSIAYIDPGNFETDL SGAQYKYELLWIILVASCAAL+
Sbjct: 26  QILVPEKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALV 85

Query: 306 IQSLAANLGVV 274
           IQSLAANLGVV
Sbjct: 86  IQSLAANLGVV 96



 Score = 28.5 bits (62), Expect(2) = 2e-26
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -3

Query: 508 LIENTDSNQIVVPE 467
           LIEN+DSNQI+VPE
Sbjct: 18  LIENSDSNQILVPE 31


>gb|AAP22982.1| Nramp6b [Arabidopsis thaliana]
          Length = 180

 Score =  115 bits (288), Expect(2) = 2e-26
 Identities = 59/71 (83%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
 Frame = -1

Query: 483 KLLYLNKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALI 307
           ++L   K S KN F+Y+GPGFLVSIAYIDPGNFETDL SGAQYKYELLWIILVASCAAL+
Sbjct: 26  QILVPEKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALV 85

Query: 306 IQSLAANLGVV 274
           IQSLAANLGVV
Sbjct: 86  IQSLAANLGVV 96



 Score = 28.5 bits (62), Expect(2) = 2e-26
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -3

Query: 508 LIENTDSNQIVVPE 467
           LIEN+DSNQI+VPE
Sbjct: 18  LIENSDSNQILVPE 31


>ref|XP_003546914.1| PREDICTED: metal transporter Nramp6-like [Glycine max]
          Length = 546

 Score =  115 bits (288), Expect(2) = 4e-26
 Identities = 58/66 (87%), Positives = 63/66 (95%), Gaps = 1/66 (1%)
 Frame = -1

Query: 468 NKTS*KNLFAYMGPGFLVSIAYIDPGNFETDL-SGAQYKYELLWIILVASCAALIIQSLA 292
           ++ S KNLFAYMGPGFLVSIAYIDPGNFETDL SGAQYKYELLWIIL+ASCAAL+IQS+A
Sbjct: 40  DRRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILLASCAALVIQSMA 99

Query: 291 ANLGVV 274
           ANLGVV
Sbjct: 100 ANLGVV 105



 Score = 27.3 bits (59), Expect(2) = 4e-26
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = -3

Query: 508 LIENTDSNQIVVPE 467
           LIEN+D+NQIVVP+
Sbjct: 27  LIENSDTNQIVVPD 40


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