BLASTX nr result

ID: Panax21_contig00014016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00014016
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   123   1e-26
ref|XP_002322768.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_002309263.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_003519101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   105   3e-21
gb|ACU19564.1| unknown [Glycine max]                                  105   3e-21

>ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A [Vitis vinifera]
           gi|296084011|emb|CBI24399.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/102 (58%), Positives = 78/102 (76%)
 Frame = +2

Query: 2   SRINAMSMRYRETITKSTKGWKEKLFSRNASVADTGSEIRRDENVDIATVSRTMEHLQTT 181
           SR NA+SMRY+E+I+KST+GWKE+LFSRN S+AD GS++RR+ N  IATVSR MEHL+T 
Sbjct: 282 SRFNAVSMRYKESISKSTRGWKERLFSRNTSMADIGSDVRREVNAGIATVSRMMEHLETR 341

Query: 182 DNSPTASVSLSNTLEDRSLPDRGNQHTAVTDGNNSLSESNVQ 307
           DNS T   S+S++ ED S P  G+Q  A T  +N L ++NVQ
Sbjct: 342 DNSRTTPSSVSDSSEDTSSPSLGDQRMAETSAHNPLGDTNVQ 383


>ref|XP_002322768.1| predicted protein [Populus trichocarpa] gi|222867398|gb|EEF04529.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/100 (54%), Positives = 76/100 (76%)
 Frame = +2

Query: 2   SRINAMSMRYRETITKSTKGWKEKLFSRNASVADTGSEIRRDENVDIATVSRTMEHLQTT 181
           SR+NA+SMRY+E+I++ST+GWKE+LFSRN+S++D  S++RR+ N  IATVSR ME L+T 
Sbjct: 276 SRLNAVSMRYKESISRSTRGWKERLFSRNSSMSDISSDVRREVNAGIATVSRMMERLETR 335

Query: 182 DNSPTASVSLSNTLEDRSLPDRGNQHTAVTDGNNSLSESN 301
           D+     VS+SN L DRS  +R NQ+TA T   + L+E +
Sbjct: 336 DDGGDNQVSVSNHLTDRSNVERSNQNTAATHIESPLNEGS 375


>ref|XP_002309263.1| predicted protein [Populus trichocarpa] gi|222855239|gb|EEE92786.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/100 (54%), Positives = 74/100 (74%)
 Frame = +2

Query: 2   SRINAMSMRYRETITKSTKGWKEKLFSRNASVADTGSEIRRDENVDIATVSRTMEHLQTT 181
           SR+NA+SMRY+E+I++ST+GWK++LFSRN+SV+D GSE+RRD N  IATVSR ME L+T 
Sbjct: 278 SRLNAVSMRYKESISRSTRGWKDRLFSRNSSVSDLGSEVRRDVNAGIATVSRMMERLETR 337

Query: 182 DNSPTASVSLSNTLEDRSLPDRGNQHTAVTDGNNSLSESN 301
           DNS    VS+S    DR   +R NQ+ A T   + ++E +
Sbjct: 338 DNSGANQVSVSTHWTDRPAAERSNQNNAETHIESPVNEGS 377


>ref|XP_003519101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 380

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/100 (51%), Positives = 72/100 (72%)
 Frame = +2

Query: 2   SRINAMSMRYRETITKSTKGWKEKLFSRNASVADTGSEIRRDENVDIATVSRTMEHLQTT 181
           SR NA+SMRY+++I+K T+GWKE+LFS N+S+++ GSE+RR+ N  IA+VSR ME L+T 
Sbjct: 269 SRFNAVSMRYKDSISKGTRGWKERLFSPNSSMSELGSEVRRELNAKIASVSRLMERLETR 328

Query: 182 DNSPTASVSLSNTLEDRSLPDRGNQHTAVTDGNNSLSESN 301
           +N+  A  SLSN L +RS+ +  NQ      G NSL  +N
Sbjct: 329 ENNSAAGTSLSNHLVNRSIAETSNQSNVEARGENSLHGNN 368


>gb|ACU19564.1| unknown [Glycine max]
          Length = 380

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/100 (51%), Positives = 72/100 (72%)
 Frame = +2

Query: 2   SRINAMSMRYRETITKSTKGWKEKLFSRNASVADTGSEIRRDENVDIATVSRTMEHLQTT 181
           SR NA+SMRY+++I+K T+GWKE+LFS N+S+++ GSE+RR+ N  IA+VSR ME L+T 
Sbjct: 269 SRFNAVSMRYKDSISKGTRGWKERLFSPNSSMSELGSEVRRELNAKIASVSRLMERLETR 328

Query: 182 DNSPTASVSLSNTLEDRSLPDRGNQHTAVTDGNNSLSESN 301
           +N+  A  SLSN L +RS+ +  NQ      G NSL  +N
Sbjct: 329 ENNSAAGTSLSNHLVNRSIAETSNQSNVEARGENSLHGNN 368


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