BLASTX nr result
ID: Panax21_contig00014005
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00014005
(869 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 157 2e-36
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera] 156 7e-36
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 155 1e-35
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 151 2e-34
emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera] 139 6e-34
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 157 bits (398), Expect = 2e-36
Identities = 81/115 (70%), Positives = 95/115 (82%)
Frame = +2
Query: 521 LGIRAFLMQVRKPVAYFIEKLSRATLNYFTYDKEMYALVRAFETWQHYL*IKEFVIHTDH 700
+GI LMQ +KP+AYF EKL ATLNY TYDKE+YALVRA +T QHYL KEFVIHTDH
Sbjct: 1215 VGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDH 1274
Query: 701 E*LKYLKGQHKLNKRNARWMEFIKTFPYVI*YKQGIYSVVPNALSC*YVLLNTLD 865
E LK+LKGQ KLNKR+ARW+EFI+TFPYVI YK+G +VV +ALS YVLL++LD
Sbjct: 1275 ESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLD 1329
Score = 120 bits (301), Expect = 4e-25
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = +3
Query: 222 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 401
IRGI+HQI+FV + PN PAY++NP E EL++QV +LM +G +RESMSPCAV V+LVP
Sbjct: 895 IRGIEHQIDFVPGASLPNRPAYRTNPVETKELEKQVTELMERGHIRESMSPCAVPVLLVP 954
Query: 402 KKDGKWRMCIDCRAINNIT 458
KKDG WRMC+DCRAINNIT
Sbjct: 955 KKDGSWRMCVDCRAINNIT 973
>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
Length = 1281
Score = 156 bits (394), Expect = 7e-36
Identities = 77/114 (67%), Positives = 94/114 (82%)
Frame = +2
Query: 524 GIRAFLMQVRKPVAYFIEKLSRATLNYFTYDKEMYALVRAFETWQHYL*IKEFVIHTDHE 703
GIRA LMQ ++P+ YF EKL+ TLNY TYDKE+YALVRA ETWQHYL KEFVIHTDHE
Sbjct: 743 GIRAILMQEKRPITYFSEKLNGTTLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDHE 802
Query: 704 *LKYLKGQHKLNKRNARWMEFIKTFPYVI*YKQGIYSVVPNALSC*YVLLNTLD 865
LK+LKGQ KLN+R+A+W+EFI+TF YVI YKQG ++V +ALS Y L++TL+
Sbjct: 803 SLKHLKGQGKLNRRHAKWVEFIETFLYVIKYKQGKENIVADALSRRYALVSTLN 856
Score = 109 bits (272), Expect = 9e-22
Identities = 53/79 (67%), Positives = 60/79 (75%)
Frame = +3
Query: 222 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 401
IRGI+ QI+FV T PN AY+SNPEE ELQRQV+ L+ KG VRES+SPC V V LV
Sbjct: 489 IRGIEXQIDFVSXATIPNRXAYRSNPEETKELQRQVEXLLTKGHVRESLSPCVVXVXLVX 548
Query: 402 KKDGKWRMCIDCRAINNIT 458
KKDG WRMC+D R INNIT
Sbjct: 549 KKDGTWRMCVDXRXINNIT 567
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 155 bits (391), Expect = 1e-35
Identities = 77/105 (73%), Positives = 89/105 (84%)
Frame = +2
Query: 521 LGIRAFLMQVRKPVAYFIEKLSRATLNYFTYDKEMYALVRAFETWQHYL*IKEFVIHTDH 700
+GI A LMQ +KP+AYF EKL ATLNY TYDKE+YALVRA +TWQHYL KEFVIHTDH
Sbjct: 634 VGIGAVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTWQHYLWPKEFVIHTDH 693
Query: 701 E*LKYLKGQHKLNKRNARWMEFIKTFPYVI*YKQGIYSVVPNALS 835
E LK+LKGQ KLNKR+ARW+EFI+TFPYVI YK+G +VV +ALS
Sbjct: 694 ESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVADALS 738
Score = 114 bits (284), Expect = 4e-23
Identities = 55/100 (55%), Positives = 72/100 (72%)
Frame = +3
Query: 222 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 401
IRGI+HQI+FV + PN PAY++NP E EL++QV++LM +G + ESMSPCAV V+LVP
Sbjct: 463 IRGIEHQIDFVPGASLPNRPAYRTNPVETKELEKQVNELMERGHICESMSPCAVPVLLVP 522
Query: 402 KKDGKWRMCIDCRAINNITGVLVDEEKIHTILDWPSPTNV 521
KKDG WR + + GV VDEEK+ I +WPSP +V
Sbjct: 523 KKDGSWRF------VASTDGVKVDEEKVKAIREWPSPKSV 556
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 151 bits (381), Expect = 2e-34
Identities = 76/115 (66%), Positives = 91/115 (79%)
Frame = +2
Query: 521 LGIRAFLMQVRKPVAYFIEKLSRATLNYFTYDKEMYALVRAFETWQHYL*IKEFVIHTDH 700
+GI LMQ +PVAYF EKL A LNY YDKE+YALVRA ETWQHYL KEFVIH+DH
Sbjct: 1026 IGIGGVLMQNGQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDH 1085
Query: 701 E*LKYLKGQHKLNKRNARWMEFIKTFPYVI*YKQGIYSVVPNALSC*YVLLNTLD 865
E LKYLKGQ KLN+R+A+W+EFI+TFPYV+ YK+G ++V +ALS VLLN L+
Sbjct: 1086 EALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLE 1140
Score = 124 bits (311), Expect = 3e-26
Identities = 55/79 (69%), Positives = 66/79 (83%)
Frame = +3
Query: 222 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 401
+RGI+HQI+ + T PN PAY++NPEE E+QRQV L+ KG+VRES+SPCAV VILVP
Sbjct: 706 LRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGYVRESLSPCAVPVILVP 765
Query: 402 KKDGKWRMCIDCRAINNIT 458
KKDG WRMC+DCRAINNIT
Sbjct: 766 KKDGSWRMCVDCRAINNIT 784
>emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]
Length = 1124
Score = 139 bits (351), Expect(2) = 6e-34
Identities = 68/93 (73%), Positives = 80/93 (86%)
Frame = +2
Query: 521 LGIRAFLMQVRKPVAYFIEKLSRATLNYFTYDKEMYALVRAFETWQHYL*IKEFVIHTDH 700
+GI A LMQ ++P+AYF EKL+ ATLNY TYDKE+YALVRA ETWQHYL KEFVIHTDH
Sbjct: 629 IGIGAVLMQEKRPIAYFSEKLNGATLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDH 688
Query: 701 E*LKYLKGQHKLNKRNARWMEFIKTFPYVI*YK 799
E LK+LKGQ KLN+R+A+ +EFI+TFPYVI YK
Sbjct: 689 EFLKHLKGQDKLNRRHAKRVEFIETFPYVIKYK 721
Score = 31.2 bits (69), Expect(2) = 6e-34
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 459 GVLVDEEKIHTILDWPSPTNVWE 527
G+ VDEEK+ I +WP+P ++ E
Sbjct: 599 GIEVDEEKVKAIKEWPTPKSITE 621