BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013984
         (2402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi...   984   0.0  
ref|XP_002319950.1| predicted protein [Populus trichocarpa] gi|2...   922   0.0  
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi...   877   0.0  
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp....   837   0.0  
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th...   831   0.0  

>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
            [Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
            protein product [Vitis vinifera]
          Length = 742

 Score =  984 bits (2543), Expect(2) = 0.0
 Identities = 476/622 (76%), Positives = 538/622 (86%)
 Frame = -2

Query: 2131 YARDVFDEFPEPYVFLWNAIIRGYSMHKMFCEAIEMYTRMQELGVRPDSFTLPHVLKACG 1952
            YAR VFDEFPEP VFLWNAIIRGYS H  F +AIEMY+RMQ  GV PD FTLP VLKAC 
Sbjct: 121  YARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACS 180

Query: 1951 DLPAVEIGRAVHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLDDRTVVSWTS 1772
             +P +E+G+ VHGQIFR GFE DVFVQNGLV+LYAKC R+E ARIVF+GLDDR +VSWTS
Sbjct: 181  GVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTS 240

Query: 1771 IISGYAQNGQPLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIKMG 1592
            +ISGY QNG P+EALRIF QMR+ + + DWIALVSVLRAYTDVEDL QGKSIHGC++KMG
Sbjct: 241  MISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMG 300

Query: 1591 LEFEPDLRIALTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYAKNGCAEEAIQLFL 1412
            LEFEPDL I+LT +YAKCG+V VA+S F+QME+ NV++WN MISGYAKNG   EA+ LF 
Sbjct: 301  LEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQ 360

Query: 1411 EMISKNIRPDSITVRSTILACARVGSLGQARWMDEYINNSEYRDDVFVNTALIDMYAKCG 1232
            EMISKNIR DSITVRS ILACA+VGSL  A+WM +YIN +EYR+DVFVNTALIDM+AKCG
Sbjct: 361  EMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCG 420

Query: 1231 SVELAHRVFNRILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGILT 1052
            SV+LA  VF+R L+KDVVVWSA+IVGYGLHG+G++AIDLFYAMKQAGV PNDVTFVG+LT
Sbjct: 421  SVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLT 480

Query: 1051 ACNHSGLVEEGWNFFHTMRHYGIEPRHQHYACVVDLLGRAGYLEQAYHFIMKMPIEPHIT 872
            ACNHSGLVEEGW  FH+M++YGIE RHQHYACVVDLLGR+G+L +AY FI  MPIEP ++
Sbjct: 481  ACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVS 540

Query: 871  VWGALLGACKIYRHVTLGEYAAERLFSLDPFNTGHYVQLLNLYASVRLWSGVAKVRVLMK 692
            VWGALLGACKIYRHVTLGEYAAE+LFSLDPFNTGHYVQL NLYAS RLW  VAKVR+LM+
Sbjct: 541  VWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMR 600

Query: 691  ERGLSKDLGYSMIEINGKLQAFRMADKSHPXXXXXXXXXXXXXXXXKAAGFIPDTESVLY 512
            E+GLSKDLGYS+IEINGKLQAFR+ DKSHP                K AGFIP  ESVL+
Sbjct: 601  EKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLH 660

Query: 511  DLSYEDKEESLCNHSERLAIAFGLISTPCGTTLRITKNLRACVNCHSATKLISKLVNREI 332
            DL+ E+KEE+LCNHSERLAIA+GLIST  GTTLRITKNLRAC+NCHSATKLISKLVNREI
Sbjct: 661  DLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREI 720

Query: 331  VVRDANRFHHFKDGLCSCGDYW 266
            VVRDANRFHHFK+G+CSC DYW
Sbjct: 721  VVRDANRFHHFKNGVCSCRDYW 742



 Score = 83.2 bits (204), Expect(2) = 0.0
 Identities = 42/85 (49%), Positives = 60/85 (70%)
 Frame = -1

Query: 2387 QFPDSTFKFLRFYASFPLHLDNYLFDQNNLYNSFNPESYYTSLLDKLTHKTLLNQFHARL 2208
            +FP + FKFL FY+S PL LD+  +     Y+ F+ +S+++SLLD   HK  LNQ HA+L
Sbjct: 38   EFPATLFKFLNFYSSLPLPLDHSDYIP---YSGFDFDSFFSSLLDHSVHKRHLNQIHAQL 94

Query: 2207 LVSGLHYNGFIITKLLNVSSNLGEI 2133
            +VSGL  +GF++TK +N S N+GEI
Sbjct: 95   VVSGLVESGFLVTKFVNASWNIGEI 119



 Score =  162 bits (409), Expect = 5e-37
 Identities = 102/362 (28%), Positives = 182/362 (50%), Gaps = 6/362 (1%)
 Frame = -2

Query: 1921 VHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLDDRTVVSWTSIISGYAQNGQ 1742
            +H Q+   G     F+    V+       I  AR VFD   + +V  W +II GY+ +  
Sbjct: 90   IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149

Query: 1741 PLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIKMGLEFEPDLRIA 1562
              +A+ ++S+M+      D   L  VL+A + V  L  GK +HG I ++G E +  ++  
Sbjct: 150  FGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNG 209

Query: 1561 LTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYAKNGCAEEAIQLFLEMISKNIRPD 1382
            L  LYAKCG V  A+ +F  ++  N++ W +MISGY +NG   EA+++F +M  +N++PD
Sbjct: 210  LVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPD 269

Query: 1381 SITVRSTILACARVGSLGQARWMDEYI--NNSEYRDDVFVNTALIDMYAKCGSVELAHRV 1208
             I + S + A   V  L Q + +   +     E+  D+ +  +L  MYAKCG V +A   
Sbjct: 270  WIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI--SLTAMYAKCGQVMVARSF 327

Query: 1207 FNRILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGILTACNHSGLV 1028
            F+++   +V++W+A+I GY  +G   EA+ LF  M    +  + +T    + AC   G +
Sbjct: 328  FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387

Query: 1027 EEGWNFFHTMRHYGIEPRHQH----YACVVDLLGRAGYLEQAYHFIMKMPIEPHITVWGA 860
            +        M  Y  +  +++       ++D+  + G ++ A   +    ++  + VW A
Sbjct: 388  D----LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLARE-VFDRTLDKDVVVWSA 442

Query: 859  LL 854
            ++
Sbjct: 443  MI 444


>ref|XP_002319950.1| predicted protein [Populus trichocarpa] gi|222858326|gb|EEE95873.1|
            predicted protein [Populus trichocarpa]
          Length = 746

 Score =  922 bits (2382), Expect(2) = 0.0
 Identities = 456/621 (73%), Positives = 519/621 (83%)
 Frame = -2

Query: 2128 ARDVFDEFPEPYVFLWNAIIRGYSMHKMFCEAIEMYTRMQELGVRPDSFTLPHVLKACGD 1949
            AR +FD+FP+P VFLWNAI+R YS H  F  AIEMY RMQ   V PD F+ P VLKAC  
Sbjct: 126  ARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSA 185

Query: 1948 LPAVEIGRAVHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLDDRTVVSWTSI 1769
            LPA+E+GR VHGQIFRHGFE DVFVQNGLV+LYAKC  I  A  VF  L DRT+VSWTSI
Sbjct: 186  LPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSI 245

Query: 1768 ISGYAQNGQPLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIKMGL 1589
            ISGYAQNGQP+EALRIFS+MR+ +   DWIALVSVLRAYTDVEDL  GKSIHGC+IKMGL
Sbjct: 246  ISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGL 305

Query: 1588 EFEPDLRIALTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYAKNGCAEEAIQLFLE 1409
            E E DL I+LT+LYAKCG V VA+  FNQ+E  ++I WN MISGY KNG AEEAI+LF  
Sbjct: 306  ECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRL 365

Query: 1408 MISKNIRPDSITVRSTILACARVGSLGQARWMDEYINNSEYRDDVFVNTALIDMYAKCGS 1229
            M SKNIRPDSITV S+I ACA++GSL  ARWMDEYI+ SE+R+DV VNT+LID YAKCGS
Sbjct: 366  MKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGS 425

Query: 1228 VELAHRVFNRILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGILTA 1049
            V++A  VF+RI +KDVVVWSA++VGYGLHGQGRE+I LF+AM+QAGV PNDVTFVG+LTA
Sbjct: 426  VDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTA 485

Query: 1048 CNHSGLVEEGWNFFHTMRHYGIEPRHQHYACVVDLLGRAGYLEQAYHFIMKMPIEPHITV 869
            C +SGLVEEGW+ FH MR YGIEPRHQHYACVVDLLGRAG+L++AY+F+M MPIEP ++V
Sbjct: 486  CKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSV 545

Query: 868  WGALLGACKIYRHVTLGEYAAERLFSLDPFNTGHYVQLLNLYASVRLWSGVAKVRVLMKE 689
            WGALL ACKI+RHVTLGEYAAERLFSLDP+NTGHYVQL NLYAS  LW  VAKVRVLM+E
Sbjct: 546  WGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMRE 605

Query: 688  RGLSKDLGYSMIEINGKLQAFRMADKSHPXXXXXXXXXXXXXXXXKAAGFIPDTESVLYD 509
            +GL+K LGYS+IEINGKLQAF+  DK+HP                K AGF+P TESVL+D
Sbjct: 606  KGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHD 665

Query: 508  LSYEDKEESLCNHSERLAIAFGLISTPCGTTLRITKNLRACVNCHSATKLISKLVNREIV 329
            L+YE+ EE+LCNHSERLAIA+GLISTP GTTLRITKNLRAC NCH+A KLISKLV+REIV
Sbjct: 666  LNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIV 725

Query: 328  VRDANRFHHFKDGLCSCGDYW 266
            VRDA RFHHFKDG CSCGDYW
Sbjct: 726  VRDACRFHHFKDGACSCGDYW 746



 Score = 90.5 bits (223), Expect(2) = 0.0
 Identities = 44/92 (47%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
 Frame = -1

Query: 2396 PPFQFPDSTFKFLRFYASFPLHLDNYLFDQNNLYN--SFNPESYYTSLLDKLTHKTLLNQ 2223
            PPF+FP ST KFL  + S  L+L  +  +  +  N  +F P+ +Y SL+D   HKT LNQ
Sbjct: 34   PPFRFPASTLKFLETHYSSSLNLTTHFNNNKDDCNESTFKPDKFYASLIDDSIHKTHLNQ 93

Query: 2222 FHARLLVSGLHYNGFIITKLLNVSSNLGEILC 2127
             +A+LLV+GL Y GF+I KL+N +SN+GE+ C
Sbjct: 94   IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSC 125



 Score =  164 bits (415), Expect = 1e-37
 Identities = 99/360 (27%), Positives = 180/360 (50%), Gaps = 4/360 (1%)
 Frame = -2

Query: 1921 VHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLDDRTVVSWTSIISGYAQNGQ 1742
            ++ ++   G ++  F+   LV+  +    +  AR +FD   D  V  W +I+  Y+++G 
Sbjct: 94   IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGF 153

Query: 1741 PLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIKMGLEFEPDLRIA 1562
               A+ ++++M+      D  +   VL+A + +  L  G+ +HG I + G E +  ++  
Sbjct: 154  FGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNG 213

Query: 1561 LTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYAKNGCAEEAIQLFLEMISKNIRPD 1382
            L  LYAKCGE+  A ++F ++    ++ W ++ISGYA+NG   EA+++F EM   N+RPD
Sbjct: 214  LVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPD 273

Query: 1381 SITVRSTILACARVGSLGQARWMDEYINNSEYRDDVFVNTALIDMYAKCGSVELAHRVFN 1202
             I + S + A   V  L   + +   +       +  +  +L  +YAKCG V +A   FN
Sbjct: 274  WIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFN 333

Query: 1201 RILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGILTACNHSGLVEE 1022
            ++ N  ++ W+A+I GY  +G   EAI+LF  MK   + P+ +T    + AC   G +E 
Sbjct: 334  QVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLE- 392

Query: 1021 GWNFFHTMRHYGIEPRHQHYACV----VDLLGRAGYLEQAYHFIMKMPIEPHITVWGALL 854
                   M  Y      ++   V    +D   + G ++ A     ++P +  + VW A++
Sbjct: 393  ---LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIP-DKDVVVWSAMM 448


>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like
            [Glycine max]
          Length = 727

 Score =  877 bits (2265), Expect(2) = 0.0
 Identities = 429/622 (68%), Positives = 508/622 (81%)
 Frame = -2

Query: 2131 YARDVFDEFPEPYVFLWNAIIRGYSMHKMFCEAIEMYTRMQELGVRPDSFTLPHVLKACG 1952
            YAR +FDEF  P VF+WNAIIR YS + M+ + +EMY  M+  GV PD FT P+VLKAC 
Sbjct: 106  YARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACT 165

Query: 1951 DLPAVEIGRAVHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLDDRTVVSWTS 1772
            +L    +   +HGQI ++GF  DVFVQNGLV+LYAKC  I +A++VFDGL  RT+VSWTS
Sbjct: 166  ELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTS 225

Query: 1771 IISGYAQNGQPLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIKMG 1592
            IISGYAQNG+ +EALR+FSQMR    + DWIALVS+LRAYTDV+DL QG+SIHG +IKMG
Sbjct: 226  IISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMG 285

Query: 1591 LEFEPDLRIALTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYAKNGCAEEAIQLFL 1412
            LE EP L I+LT  YAKCG VTVAKS F+QM+ +NVI+WN MISGYAKNG AEEA+ LF 
Sbjct: 286  LEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFH 345

Query: 1411 EMISKNIRPDSITVRSTILACARVGSLGQARWMDEYINNSEYRDDVFVNTALIDMYAKCG 1232
             MIS+NI+PDS+TVRS +LA A+VGSL  A+WMD+Y++ S Y  D+FVNT+LIDMYAKCG
Sbjct: 346  YMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCG 405

Query: 1231 SVELAHRVFNRILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGILT 1052
            SVE A RVF+R  +KDVV+WSA+I+GYGLHGQG EAI+L++ MKQAGV PNDVTF+G+LT
Sbjct: 406  SVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLT 465

Query: 1051 ACNHSGLVEEGWNFFHTMRHYGIEPRHQHYACVVDLLGRAGYLEQAYHFIMKMPIEPHIT 872
            ACNHSGLV+EGW  FH M+ + I PR++HY+CVVDLLGRAGYL +A  FIMK+PIEP ++
Sbjct: 466  ACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVS 525

Query: 871  VWGALLGACKIYRHVTLGEYAAERLFSLDPFNTGHYVQLLNLYASVRLWSGVAKVRVLMK 692
            VWGALL ACKIYR VTLGEYAA +LFSLDP+NTGHYVQL NLYAS  LW  VA VRVLM+
Sbjct: 526  VWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMR 585

Query: 691  ERGLSKDLGYSMIEINGKLQAFRMADKSHPXXXXXXXXXXXXXXXXKAAGFIPDTESVLY 512
            E+GL+KDLGYS+IEINGKLQAF + DKSHP                K  GF+P TESVL+
Sbjct: 586  EKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLH 645

Query: 511  DLSYEDKEESLCNHSERLAIAFGLISTPCGTTLRITKNLRACVNCHSATKLISKLVNREI 332
            DL+YE+KEE+L  HSER+A+A+GLIST  GTTLRITKNLRACVNCHSA KLISKLV REI
Sbjct: 646  DLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREI 705

Query: 331  VVRDANRFHHFKDGLCSCGDYW 266
            +VRDANRFHHFKDGLCSCGDYW
Sbjct: 706  IVRDANRFHHFKDGLCSCGDYW 727



 Score = 72.0 bits (175), Expect(2) = 0.0
 Identities = 37/79 (46%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = -1

Query: 2366 KFLRFYA-SFPLHLDNYLFDQNNLYNSFNPESYYTSLLDKLTHKTLLNQFHARLLVSGLH 2190
            KF+++   S  LH ++++    N  + FN +S+Y SL+D  THK  L+Q H RL++SGL 
Sbjct: 30   KFVKYLCFSSALHPEHFV----NHDHCFNSDSFYASLIDNSTHKRHLDQIHNRLVISGLQ 85

Query: 2189 YNGFIITKLLNVSSNLGEI 2133
            +NGF++TKL+N SSNLG+I
Sbjct: 86   HNGFLMTKLVNGSSNLGQI 104



 Score =  159 bits (402), Expect = 3e-36
 Identities = 100/358 (27%), Positives = 181/358 (50%), Gaps = 2/358 (0%)
 Frame = -2

Query: 1921 VHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLDDRTVVSWTSIISGYAQNGQ 1742
            +H ++   G + + F+   LV+  +   +I  AR +FD      V  W +II  Y++N  
Sbjct: 75   IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNM 134

Query: 1741 PLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIKMGLEFEPDLRIA 1562
              + + ++  MR      D      VL+A T++ D      IHG IIK G   +  ++  
Sbjct: 135  YRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNG 194

Query: 1561 LTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYAKNGCAEEAIQLFLEMISKNIRPD 1382
            L  LYAKCG + VAK +F+ +    ++ W ++ISGYA+NG A EA+++F +M +  ++PD
Sbjct: 195  LVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPD 254

Query: 1381 SITVRSTILACARVGSLGQARWMDEYINNSEYRDDVFVNTALIDMYAKCGSVELAHRVFN 1202
             I + S + A   V  L Q R +  ++      D+  +  +L   YAKCG V +A   F+
Sbjct: 255  WIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFD 314

Query: 1201 RILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGILTACNHSGLVE- 1025
            ++   +V++W+A+I GY  +G   EA++LF+ M    + P+ VT    + A    G +E 
Sbjct: 315  QMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLEL 374

Query: 1024 -EGWNFFHTMRHYGIEPRHQHYACVVDLLGRAGYLEQAYHFIMKMPIEPHITVWGALL 854
             +  + + +  +YG +        ++D+  + G +E A   +     +  + +W A++
Sbjct: 375  AQWMDDYVSKSNYGSDIFVN--TSLIDMYAKCGSVEFARR-VFDRNSDKDVVMWSAMI 429


>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297330765|gb|EFH61184.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  837 bits (2163), Expect(2) = 0.0
 Identities = 400/624 (64%), Positives = 503/624 (80%), Gaps = 2/624 (0%)
 Frame = -2

Query: 2131 YARDVFDEFPEPYVFLWNAIIRGYSMHKMFCEAIEMYTRMQELGVRPDSFTLPHVLKACG 1952
            +AR VFD+ P P VF WNAIIRGYS +  F +A+ MY++MQ   V PDSFT PH+LKACG
Sbjct: 71   FARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACG 130

Query: 1951 DLPAVEIGRAVHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLD--DRTVVSW 1778
             L  +++GR VH Q+FR GFE DVFVQNGL++LYAKC R+  AR VF+GL   +RT+VSW
Sbjct: 131  GLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSW 190

Query: 1777 TSIISGYAQNGQPLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIK 1598
            T+I+S YAQNG+P+EAL IFSQMR++  + D +ALVSVL A+T ++DL QG+SIH  ++K
Sbjct: 191  TAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMK 250

Query: 1597 MGLEFEPDLRIALTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYAKNGCAEEAIQL 1418
            MGLE EPDL I+L T+YAKCG+V  AK LF++M+  N+ILWN MISGYAKNG A++AI L
Sbjct: 251  MGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDL 310

Query: 1417 FLEMISKNIRPDSITVRSTILACARVGSLGQARWMDEYINNSEYRDDVFVNTALIDMYAK 1238
            F EMI+K++RPD+I++ S I ACA+VGSL QARWMDEY++ S+YRDDVF+++ALIDM+AK
Sbjct: 311  FHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAK 370

Query: 1237 CGSVELAHRVFNRILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGI 1058
            CGSVE A  VF+R L++DVVVWSA+IVGYGLHGQ REAI L+ AM++ GV PNDVTF+G+
Sbjct: 371  CGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGL 430

Query: 1057 LTACNHSGLVEEGWNFFHTMRHYGIEPRHQHYACVVDLLGRAGYLEQAYHFIMKMPIEPH 878
            L ACNHSG+V EGW FF+ M  + I P+ QHYAC++DLLGRAG+L+QAY  I  MP++P 
Sbjct: 431  LIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPG 490

Query: 877  ITVWGALLGACKIYRHVTLGEYAAERLFSLDPFNTGHYVQLLNLYASVRLWSGVAKVRVL 698
            +TVWGALL ACK +RHV LG+YAA++LFS+DP NTGHYVQL NLYA+ RLW  VA+VRV 
Sbjct: 491  VTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550

Query: 697  MKERGLSKDLGYSMIEINGKLQAFRMADKSHPXXXXXXXXXXXXXXXXKAAGFIPDTESV 518
            MKE+GL+KD+G S +E+ G+L+ FR+ DKSHP                K  GF+ + ++ 
Sbjct: 551  MKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610

Query: 517  LYDLSYEDKEESLCNHSERLAIAFGLISTPCGTTLRITKNLRACVNCHSATKLISKLVNR 338
            L+DL+ E+ EE+LC+HSER+ IA+GLISTP GTTLRITKNLRACVNCH+ATKLISKLV R
Sbjct: 611  LHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGR 670

Query: 337  EIVVRDANRFHHFKDGLCSCGDYW 266
            EIVVRD NRFHHFKDG+CSCGDYW
Sbjct: 671  EIVVRDTNRFHHFKDGVCSCGDYW 694



 Score = 63.2 bits (152), Expect(2) = 0.0
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = -1

Query: 2294 NSFNPESYYTSLLDKLTHKTLLNQFHARLLVSGLHYNGFIITKLLNVSSNLGEI 2133
            +  + +S+Y SL+D  THK  L Q HARLLV GL ++GF+ITKL++ SS+ G+I
Sbjct: 16   SGIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDI 69



 Score =  157 bits (397), Expect = 1e-35
 Identities = 94/363 (25%), Positives = 185/363 (50%), Gaps = 5/363 (1%)
 Frame = -2

Query: 1927 RAVHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLDDRTVVSWTSIISGYAQN 1748
            R +H ++   G ++  F+   L+   +    I  AR VFD L    V  W +II GY++N
Sbjct: 38   RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 1747 GQPLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIKMGLEFEPDLR 1568
                +AL ++S+M+      D      +L+A   +  L  G+ +H  + ++G E +  ++
Sbjct: 98   NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 1567 IALTTLYAKCGEVTVAKSLFNQMEV--SNVILWNTMISGYAKNGCAEEAIQLFLEMISKN 1394
              L  LYAKC  +  A+++F  + +    ++ W  ++S YA+NG   EA+++F +M   +
Sbjct: 158  NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 1393 IRPDSITVRSTILACARVGSLGQARWMDEYINNSEYRDDVFVNTALIDMYAKCGSVELAH 1214
            ++PD + + S + A   +  L Q R +   +       +  +  +L  MYAKCG V  A 
Sbjct: 218  VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277

Query: 1213 RVFNRILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGILTACNHSG 1034
             +F+++ + ++++W+A+I GY  +G  ++AIDLF+ M    V P+ ++    ++AC   G
Sbjct: 278  ILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVG 337

Query: 1033 LVEEG-WNFFHTMRHYGIEPRHQHY--ACVVDLLGRAGYLEQAYHFIMKMPIEPHITVWG 863
             +E+  W   +  R    + R   +  + ++D+  + G +E A   +    ++  + VW 
Sbjct: 338  SLEQARWMDEYVSRS---DYRDDVFISSALIDMFAKCGSVECA-RSVFDRTLDRDVVVWS 393

Query: 862  ALL 854
            A++
Sbjct: 394  AMI 396



 Score =  115 bits (288), Expect = 5e-23
 Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 2/261 (0%)
 Frame = -2

Query: 1630 QGKSIHGCIIKMGLEFEPDLRIALTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYA 1451
            Q + IH  ++ +GL+F   L   L    +  G++T A+ +F+ +    V  WN +I GY+
Sbjct: 36   QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYS 95

Query: 1450 KNGCAEEAIQLFLEMISKNIRPDSITVRSTILACARVGSLGQARWMDEYINNSEYRDDVF 1271
            +N   ++A+ ++ +M    + PDS T    + AC  +  L   R++   +    +  DVF
Sbjct: 96   RNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVF 155

Query: 1270 VNTALIDMYAKCGSVELAHRVFN--RILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQ 1097
            V   LI +YAKC  +  A  VF    +  + +V W+A++  Y  +G+  EA+++F  M++
Sbjct: 156  VQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK 215

Query: 1096 AGVGPNDVTFVGILTACNHSGLVEEGWNFFHTMRHYGIEPRHQHYACVVDLLGRAGYLEQ 917
              V P+ V  V +L A      +E+G +   ++   G+E        +  +  + G +  
Sbjct: 216  MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVAT 275

Query: 916  AYHFIMKMPIEPHITVWGALL 854
            A     KM   P++ +W A++
Sbjct: 276  AKILFDKMK-SPNLILWNAMI 295


>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
            gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
            protein-like [Arabidopsis thaliana]
            gi|332641723|gb|AEE75244.1| mitochondrial editing factor
            22 [Arabidopsis thaliana]
          Length = 694

 Score =  831 bits (2146), Expect(2) = 0.0
 Identities = 398/624 (63%), Positives = 500/624 (80%), Gaps = 2/624 (0%)
 Frame = -2

Query: 2131 YARDVFDEFPEPYVFLWNAIIRGYSMHKMFCEAIEMYTRMQELGVRPDSFTLPHVLKACG 1952
            +AR VFD+ P P +F WNAIIRGYS +  F +A+ MY+ MQ   V PDSFT PH+LKAC 
Sbjct: 71   FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130

Query: 1951 DLPAVEIGRAVHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLD--DRTVVSW 1778
             L  +++GR VH Q+FR GF+ DVFVQNGL++LYAKC R+  AR VF+GL   +RT+VSW
Sbjct: 131  GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190

Query: 1777 TSIISGYAQNGQPLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIK 1598
            T+I+S YAQNG+P+EAL IFSQMR++  + DW+ALVSVL A+T ++DL QG+SIH  ++K
Sbjct: 191  TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250

Query: 1597 MGLEFEPDLRIALTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYAKNGCAEEAIQL 1418
            MGLE EPDL I+L T+YAKCG+V  AK LF++M+  N+ILWN MISGYAKNG A EAI +
Sbjct: 251  MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310

Query: 1417 FLEMISKNIRPDSITVRSTILACARVGSLGQARWMDEYINNSEYRDDVFVNTALIDMYAK 1238
            F EMI+K++RPD+I++ S I ACA+VGSL QAR M EY+  S+YRDDVF+++ALIDM+AK
Sbjct: 311  FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370

Query: 1237 CGSVELAHRVFNRILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGI 1058
            CGSVE A  VF+R L++DVVVWSA+IVGYGLHG+ REAI L+ AM++ GV PNDVTF+G+
Sbjct: 371  CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430

Query: 1057 LTACNHSGLVEEGWNFFHTMRHYGIEPRHQHYACVVDLLGRAGYLEQAYHFIMKMPIEPH 878
            L ACNHSG+V EGW FF+ M  + I P+ QHYACV+DLLGRAG+L+QAY  I  MP++P 
Sbjct: 431  LMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490

Query: 877  ITVWGALLGACKIYRHVTLGEYAAERLFSLDPFNTGHYVQLLNLYASVRLWSGVAKVRVL 698
            +TVWGALL ACK +RHV LGEYAA++LFS+DP NTGHYVQL NLYA+ RLW  VA+VRV 
Sbjct: 491  VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550

Query: 697  MKERGLSKDLGYSMIEINGKLQAFRMADKSHPXXXXXXXXXXXXXXXXKAAGFIPDTESV 518
            MKE+GL+KD+G S +E+ G+L+AFR+ DKSHP                K  GF+ + ++ 
Sbjct: 551  MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610

Query: 517  LYDLSYEDKEESLCNHSERLAIAFGLISTPCGTTLRITKNLRACVNCHSATKLISKLVNR 338
            L+DL+ E+ EE+LC+HSER+AIA+GLISTP GT LRITKNLRACVNCH+ATKLISKLV+R
Sbjct: 611  LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670

Query: 337  EIVVRDANRFHHFKDGLCSCGDYW 266
            EIVVRD NRFHHFKDG+CSCGDYW
Sbjct: 671  EIVVRDTNRFHHFKDGVCSCGDYW 694



 Score = 63.9 bits (154), Expect(2) = 0.0
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = -1

Query: 2294 NSFNPESYYTSLLDKLTHKTLLNQFHARLLVSGLHYNGFIITKLLNVSSNLGEI 2133
            +  + +S+Y SL+D  THK  L Q HARLLV GL ++GF+ITKL++ SS+ G+I
Sbjct: 16   SGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDI 69



 Score =  159 bits (403), Expect = 3e-36
 Identities = 89/360 (24%), Positives = 182/360 (50%), Gaps = 2/360 (0%)
 Frame = -2

Query: 1927 RAVHGQIFRHGFEWDVFVQNGLVSLYAKCSRIEIARIVFDGLDDRTVVSWTSIISGYAQN 1748
            + +H ++   G ++  F+   L+   +    I  AR VFD L    +  W +II GY++N
Sbjct: 38   KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 1747 GQPLEALRIFSQMRRLSEELDWIALVSVLRAYTDVEDLVQGKSIHGCIIKMGLEFEPDLR 1568
                +AL ++S M+      D      +L+A + +  L  G+ +H  + ++G + +  ++
Sbjct: 98   NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 1567 IALTTLYAKCGEVTVAKSLFNQMEV--SNVILWNTMISGYAKNGCAEEAIQLFLEMISKN 1394
              L  LYAKC  +  A+++F  + +    ++ W  ++S YA+NG   EA+++F +M   +
Sbjct: 158  NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 1393 IRPDSITVRSTILACARVGSLGQARWMDEYINNSEYRDDVFVNTALIDMYAKCGSVELAH 1214
            ++PD + + S + A   +  L Q R +   +       +  +  +L  MYAKCG V  A 
Sbjct: 218  VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 1213 RVFNRILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQAGVGPNDVTFVGILTACNHSG 1034
             +F+++ + ++++W+A+I GY  +G  REAID+F+ M    V P+ ++    ++AC   G
Sbjct: 278  ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 1033 LVEEGWNFFHTMRHYGIEPRHQHYACVVDLLGRAGYLEQAYHFIMKMPIEPHITVWGALL 854
             +E+  + +  +            + ++D+  + G +E A   +    ++  + VW A++
Sbjct: 338  SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMI 396



 Score =  112 bits (280), Expect = 5e-22
 Identities = 67/261 (25%), Positives = 128/261 (49%), Gaps = 2/261 (0%)
 Frame = -2

Query: 1630 QGKSIHGCIIKMGLEFEPDLRIALTTLYAKCGEVTVAKSLFNQMEVSNVILWNTMISGYA 1451
            Q K IH  ++ +GL+F   L   L    +  G++T A+ +F+ +    +  WN +I GY+
Sbjct: 36   QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 1450 KNGCAEEAIQLFLEMISKNIRPDSITVRSTILACARVGSLGQARWMDEYINNSEYRDDVF 1271
            +N   ++A+ ++  M    + PDS T    + AC+ +  L   R++   +    +  DVF
Sbjct: 96   RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 1270 VNTALIDMYAKCGSVELAHRVFN--RILNKDVVVWSALIVGYGLHGQGREAIDLFYAMKQ 1097
            V   LI +YAKC  +  A  VF    +  + +V W+A++  Y  +G+  EA+++F  M++
Sbjct: 156  VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215

Query: 1096 AGVGPNDVTFVGILTACNHSGLVEEGWNFFHTMRHYGIEPRHQHYACVVDLLGRAGYLEQ 917
              V P+ V  V +L A      +++G +   ++   G+E        +  +  + G +  
Sbjct: 216  MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 916  AYHFIMKMPIEPHITVWGALL 854
            A     KM   P++ +W A++
Sbjct: 276  AKILFDKMK-SPNLILWNAMI 295