BLASTX nr result
ID: Panax21_contig00013939
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00013939 (458 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26041.3| unnamed protein product [Vitis vinifera] 249 2e-64 ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 249 2e-64 ref|XP_002314343.1| predicted protein [Populus trichocarpa] gi|2... 244 4e-63 emb|CAN83429.1| hypothetical protein VITISV_034872 [Vitis vinifera] 236 1e-60 ref|XP_003526886.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 224 4e-57 >emb|CBI26041.3| unnamed protein product [Vitis vinifera] Length = 648 Score = 249 bits (636), Expect = 2e-64 Identities = 127/152 (83%), Positives = 139/152 (91%) Frame = +1 Query: 1 TDYMIESLRSRLFNRPSHIQAMAFAPVIEKKSCIIADQSGSGKTMAYLLPVIQRLRQEEL 180 +DYMIESLR +LF RPSHIQAMAFA V+E KSCIIADQSGSGKT+AYLLPVIQRLR+EEL Sbjct: 249 SDYMIESLRGQLFVRPSHIQAMAFATVMEGKSCIIADQSGSGKTLAYLLPVIQRLREEEL 308 Query: 181 QGLGKSLAQNPRVVILVPTAELASQVLSNCRLMSKFGVPFRSMVATGGFRQKTQLESLRQ 360 QGLGKS A P+VVILVPTAELASQVLSNCR +SKFG PFRSM ATGGFRQ+TQLE+L+Q Sbjct: 309 QGLGKSSAGCPQVVILVPTAELASQVLSNCRSISKFGAPFRSMAATGGFRQRTQLENLQQ 368 Query: 361 DLDVLIATPGRFTYLVKEGFLHLTNLTCAVLD 456 DLDVLIATPGRF +L+KEGFL LTNL CAVLD Sbjct: 369 DLDVLIATPGRFMFLIKEGFLQLTNLRCAVLD 400 >ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Vitis vinifera] Length = 707 Score = 249 bits (636), Expect = 2e-64 Identities = 127/152 (83%), Positives = 139/152 (91%) Frame = +1 Query: 1 TDYMIESLRSRLFNRPSHIQAMAFAPVIEKKSCIIADQSGSGKTMAYLLPVIQRLRQEEL 180 +DYMIESLR +LF RPSHIQAMAFA V+E KSCIIADQSGSGKT+AYLLPVIQRLR+EEL Sbjct: 308 SDYMIESLRGQLFVRPSHIQAMAFATVMEGKSCIIADQSGSGKTLAYLLPVIQRLREEEL 367 Query: 181 QGLGKSLAQNPRVVILVPTAELASQVLSNCRLMSKFGVPFRSMVATGGFRQKTQLESLRQ 360 QGLGKS A P+VVILVPTAELASQVLSNCR +SKFG PFRSM ATGGFRQ+TQLE+L+Q Sbjct: 368 QGLGKSSAGCPQVVILVPTAELASQVLSNCRSISKFGAPFRSMAATGGFRQRTQLENLQQ 427 Query: 361 DLDVLIATPGRFTYLVKEGFLHLTNLTCAVLD 456 DLDVLIATPGRF +L+KEGFL LTNL CAVLD Sbjct: 428 DLDVLIATPGRFMFLIKEGFLQLTNLRCAVLD 459 >ref|XP_002314343.1| predicted protein [Populus trichocarpa] gi|222863383|gb|EEF00514.1| predicted protein [Populus trichocarpa] Length = 425 Score = 244 bits (624), Expect = 4e-63 Identities = 122/152 (80%), Positives = 139/152 (91%) Frame = +1 Query: 1 TDYMIESLRSRLFNRPSHIQAMAFAPVIEKKSCIIADQSGSGKTMAYLLPVIQRLRQEEL 180 TD+MIESL+ ++F RPSHIQAMAFAPVI+ KSCIIADQSGSGKTMAYL+P+IQRLRQEEL Sbjct: 25 TDFMIESLKGQVFVRPSHIQAMAFAPVIDGKSCIIADQSGSGKTMAYLIPLIQRLRQEEL 84 Query: 181 QGLGKSLAQNPRVVILVPTAELASQVLSNCRLMSKFGVPFRSMVATGGFRQKTQLESLRQ 360 QGLG+S +Q+PRV+ILVPTAELASQVL+NCR MSK GVPFRSMV TGGFRQ+TQLE+L Q Sbjct: 85 QGLGQSSSQSPRVLILVPTAELASQVLNNCRSMSKHGVPFRSMVVTGGFRQRTQLENLEQ 144 Query: 361 DLDVLIATPGRFTYLVKEGFLHLTNLTCAVLD 456 +DVLIATPGRF +L+KEGFL L NL CAVLD Sbjct: 145 GVDVLIATPGRFMFLIKEGFLKLQNLKCAVLD 176 >emb|CAN83429.1| hypothetical protein VITISV_034872 [Vitis vinifera] Length = 563 Score = 236 bits (602), Expect = 1e-60 Identities = 128/179 (71%), Positives = 139/179 (77%), Gaps = 27/179 (15%) Frame = +1 Query: 1 TDYMIESLRSRLFNRPSHIQAMAFAPVIEKKSCIIADQSGSGKTMAYLLPVIQRLRQEEL 180 +DYMIESLR +LF RPSHIQAMAFA V+E KSCIIADQSGSGKT+AYLLPVIQRLR+EEL Sbjct: 137 SDYMIESLRGQLFVRPSHIQAMAFATVMEGKSCIIADQSGSGKTLAYLLPVIQRLREEEL 196 Query: 181 QGLGKSLAQNPRVVILVPTAELASQ---------------------------VLSNCRLM 279 QGLGKS A PRVVILVPTAELASQ VLSNCR + Sbjct: 197 QGLGKSSAGCPRVVILVPTAELASQMRFCYVCGSFNANNVVQEHKDKTIHTKVLSNCRSI 256 Query: 280 SKFGVPFRSMVATGGFRQKTQLESLRQDLDVLIATPGRFTYLVKEGFLHLTNLTCAVLD 456 SKFG PFRSM ATGGFRQ+TQLE+L+QDLDVLIATPGRF +L+KEGFL LTNL CAVLD Sbjct: 257 SKFGAPFRSMAATGGFRQRTQLENLQQDLDVLIATPGRFMFLIKEGFLQLTNLRCAVLD 315 >ref|XP_003526886.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Glycine max] Length = 530 Score = 224 bits (572), Expect = 4e-57 Identities = 110/155 (70%), Positives = 132/155 (85%), Gaps = 3/155 (1%) Frame = +1 Query: 1 TDYMIESLRSRLFNRPSHIQAMAFAPVIEKKSCIIADQSGSGKTMAYLLPVIQRLRQEEL 180 ++YMIESL+ LF+RPSH+QAMAF PVI K+C+IADQSGSGKT AYL P+IQRLRQ+EL Sbjct: 132 SEYMIESLQKLLFSRPSHVQAMAFTPVISGKTCVIADQSGSGKTFAYLAPIIQRLRQQEL 191 Query: 181 QGL---GKSLAQNPRVVILVPTAELASQVLSNCRLMSKFGVPFRSMVATGGFRQKTQLES 351 +G+ S A +PRV++L PTAELASQVL NCR +SK GVPF+SMV TGGFRQKTQLE+ Sbjct: 192 EGIISKSSSQAPSPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGGFRQKTQLEN 251 Query: 352 LRQDLDVLIATPGRFTYLVKEGFLHLTNLTCAVLD 456 L+Q +DVLIATPGRF +L+ +GFLHLTNL CAVLD Sbjct: 252 LQQGVDVLIATPGRFLFLINQGFLHLTNLRCAVLD 286