BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013912
         (2604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...   495   0.0  
ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|2...   474   0.0  
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...   461   0.0  
ref|XP_002888226.1| helicase domain-containing protein [Arabidop...   451   0.0  
ref|NP_176103.2| helicase associated domain-containing protein [...   439   0.0  

>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
            gi|297739540|emb|CBI29722.3| unnamed protein product
            [Vitis vinifera]
          Length = 1458

 Score =  495 bits (1275), Expect(2) = 0.0
 Identities = 256/356 (71%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
 Frame = -3

Query: 1066 DAQNTVAAFALFRLFPDLPIHLPVIEPYSSLVLQWEEGESSANVEDNEADRRAGFVNSLL 887
            DAQN VAA+AL++LFPDLPIHL + EPY+S V+QW+EGESS  +ED+E DRRAGFVNS+L
Sbjct: 476  DAQNAVAAYALYQLFPDLPIHLAITEPYASFVIQWKEGESSIRIEDSEEDRRAGFVNSIL 535

Query: 886  NVDVMDPIASADLVNSPLQEICQKSH-EGNESSAAGSTDLKVKSVSCYHKEVESSYLKRK 710
            +       A  D+ ++ L +  Q    E N +  A   DLK   V  + KE ESSYLK++
Sbjct: 536  DAGDSGSTAFVDVTDNSLPKKFQMPQIEENRNLNAAGPDLKPGRVGNF-KEAESSYLKQE 594

Query: 709  QENKNKMERYKDMLKSRGTLPISELKGDILRLLKENNVLVVCGETGCGKTTQVPQFILDD 530
             ENK K+ +YKDMLK+R  LPI+ELK +IL++LKE +VLVVCGETG GKTTQVPQFILDD
Sbjct: 595  YENKMKIGKYKDMLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSGKTTQVPQFILDD 654

Query: 529  MIEAGHGGHCNIICTQPRRIAAISVAERVADERCESSPGSNDSLVGYQVRLDSARNERTK 350
            MIEAG+GG+CNIICTQPRRIAAISVAERVADERCE SPGS+ S+VGYQVRLDSA N RTK
Sbjct: 655  MIEAGNGGYCNIICTQPRRIAAISVAERVADERCEPSPGSDGSVVGYQVRLDSASNVRTK 714

Query: 349  LLFCTTGILLRKFAGDKNMADVTHVIVDEVHERSLLGDFLLIVLKKLIEKQSADSTHKLK 170
            LLFCTTGILLRK AGDKN++ +THVIVDEVHERSLLGDFLLIVLK LIEKQS DST KLK
Sbjct: 715  LLFCTTGILLRKLAGDKNLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSTDSTPKLK 774

Query: 169  VVLMSATVDSQQFSRYFGHCPVITAKGRTHPVSTFFLEDIYENFNYRLPSDSPASI 2
            V+LMSATVDS  FSRYFG CPVITA GRTHPVST+FLEDIYE+ +YRL SDSPASI
Sbjct: 775  VILMSATVDSNLFSRYFGGCPVITAVGRTHPVSTYFLEDIYESIDYRLASDSPASI 830



 Score =  469 bits (1206), Expect(2) = 0.0
 Identities = 265/438 (60%), Positives = 317/438 (72%), Gaps = 14/438 (3%)
 Frame = -1

Query: 2406 GPKLQISAXXXXXXXXXXXNSGHSNPFPDPTPADDSLSKAQKAKKLRSIYEKLSCEGFSD 2227
            GPKLQISA           NSG S P   P PADD+LSKAQKAKKLRS+YEKLSCEGFS+
Sbjct: 26   GPKLQISAENENRLRRLLLNSGRSGPASSPAPADDTLSKAQKAKKLRSVYEKLSCEGFSN 85

Query: 2226 EHIERVLSALKENATFEAALDWLCLNLAGNELPLKFAGGSSLHTNEG-SVGILSIAQDDW 2050
            +HIE  LSALKE ATFE+ALDWLC NL+ NELPLKF+ G+SLH NEG S+GI+S A++DW
Sbjct: 86   DHIELALSALKEGATFESALDWLCFNLSSNELPLKFSSGTSLHANEGGSIGIISTAREDW 145

Query: 2049 CPSMDSSLEIKD-ETTEICVKVKGQRDVDALESCQPFQADWIHQYVXXXXXXXXXXXXXX 1873
             PS+ SS  I+D E + I +++KG+RD D+++S Q  QADWI QYV              
Sbjct: 146  TPSVYSSGNIEDDEVSGISIRIKGRRDDDSVDSRQQSQADWIRQYVAQQEEDESKTWEDD 205

Query: 1872 EIDKGSMEQVAEPRSDPDSIIKEYQNARLEAINAKQRGDRKGQEQAGQIIRKLKQEMSAL 1693
             +D  S ++VAEPRS  ++I KEY  ARLEA++AK++GD+KGQEQAG IIRKLKQE+SAL
Sbjct: 206  AVDDYSTKKVAEPRSY-ETIAKEYHAARLEALSAKEKGDKKGQEQAGHIIRKLKQELSAL 264

Query: 1692 GLSDELLLSVNESTYNHAS-----DETCDSMPYKYPHNDTLCKVEGGM-----ESKVDQS 1543
            GLSD  L S     Y HAS     D + +SMP K+P   TLC+VEGG      ES  D S
Sbjct: 265  GLSDNSLES--GFRYEHASGFASEDMSYNSMPEKHPEAITLCEVEGGSVMHPSESTFDGS 322

Query: 1542 VTES-SSKELS-EDIPSSILSNDSIAQEEESGDVELGNFLFEDXXXSEVLPPEVVKLQKK 1369
            + E  SS ELS   + SS+   + IA +E+SGDVEL NF FED   SEVLP EV+KLQ K
Sbjct: 323  IKECFSSTELSMNSVSSSVPLEERIAAQEDSGDVELSNF-FEDAPSSEVLPHEVLKLQNK 381

Query: 1368 ESISELSFGKNLEKLEGIWKKGDPQKIPKAILHQLCQKLGWEAPKYSKLLGKGHGPSYTV 1189
            E + ELS GKNLEKLEGIWKKGDPQKIPKA+LHQLCQ+ GWEAPK +K+LGK +G  Y V
Sbjct: 382  EKMKELSSGKNLEKLEGIWKKGDPQKIPKAVLHQLCQRSGWEAPKLNKVLGKENGFCYAV 441

Query: 1188 SVLRKASGRGKSRKAGGL 1135
            SVLRK++GRGKSRKAGGL
Sbjct: 442  SVLRKSTGRGKSRKAGGL 459


>ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|222838999|gb|EEE77350.1|
            predicted protein [Populus trichocarpa]
          Length = 870

 Score =  474 bits (1221), Expect(2) = 0.0
 Identities = 246/355 (69%), Positives = 288/355 (81%)
 Frame = -3

Query: 1066 DAQNTVAAFALFRLFPDLPIHLPVIEPYSSLVLQWEEGESSANVEDNEADRRAGFVNSLL 887
            DAQN VAAFAL +LFPDLPIHL +I PYSSLVLQW++GE+S  VED+  DRRAGFV+ LL
Sbjct: 471  DAQNRVAAFALHQLFPDLPIHLAIINPYSSLVLQWKQGETSKRVEDSVEDRRAGFVDLLL 530

Query: 886  NVDVMDPIASADLVNSPLQEICQKSHEGNESSAAGSTDLKVKSVSCYHKEVESSYLKRKQ 707
              D     A  D   S  + +     E  + S A   D KV+    Y K+ ESSYL+++Q
Sbjct: 531  KADGSSSSA-VDATTSSQETLKITDVEETKDSGA---DAKVERKK-YAKDAESSYLRQEQ 585

Query: 706  ENKNKMERYKDMLKSRGTLPISELKGDILRLLKENNVLVVCGETGCGKTTQVPQFILDDM 527
            E+K K+++YK+ML SR  LPI+ LK DIL++LKEN+VLVVCGETG GKTTQVPQFILDDM
Sbjct: 586  ESKRKLKKYKEMLCSRAALPIAGLKVDILQMLKENDVLVVCGETGSGKTTQVPQFILDDM 645

Query: 526  IEAGHGGHCNIICTQPRRIAAISVAERVADERCESSPGSNDSLVGYQVRLDSARNERTKL 347
            IE+GHGG+CNIICTQPRRIAAISVAERVADERCE SPG+  SLVGYQVRLDSARNE+TKL
Sbjct: 646  IESGHGGNCNIICTQPRRIAAISVAERVADERCEPSPGAVGSLVGYQVRLDSARNEKTKL 705

Query: 346  LFCTTGILLRKFAGDKNMADVTHVIVDEVHERSLLGDFLLIVLKKLIEKQSADSTHKLKV 167
            LFCTTGILLRK AGD++++ +THVIVDEVHERSLLGDFLLIVLK LIEKQS+  T KLKV
Sbjct: 706  LFCTTGILLRKLAGDRSLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSSQDTPKLKV 765

Query: 166  VLMSATVDSQQFSRYFGHCPVITAKGRTHPVSTFFLEDIYENFNYRLPSDSPASI 2
            +LMSATVDS  FSRYFG CPV+TA+GRTHPV+ +FLEDIYE  NY L SD+PA++
Sbjct: 766  ILMSATVDSSLFSRYFGQCPVLTAQGRTHPVTNYFLEDIYEYINYNLASDAPAAL 820



 Score =  375 bits (964), Expect(2) = 0.0
 Identities = 228/448 (50%), Positives = 287/448 (64%), Gaps = 23/448 (5%)
 Frame = -1

Query: 2406 GPKLQISAXXXXXXXXXXXNSGHSNPFPDP-TPADDSLSKAQKAKKLRSIYEKLSCEGFS 2230
            GP+LQISA           NS  + P     T   +SLSKAQKAKKL++IYEKLSCEGFS
Sbjct: 27   GPRLQISAENENRLRRLLLNSTTTPPLQTTVTDNTNSLSKAQKAKKLKNIYEKLSCEGFS 86

Query: 2229 DEHIERVLSALKENATFEAALDWLCLNLAGNELPLKFAGGSSLHTNEG--SVGILSIAQD 2056
            ++HIE  LS+LK+NATFE ALDWLCLNLAGNELPLKF+GG+SL+++ G  +V ++S A++
Sbjct: 87   NDHIELALSSLKDNATFETALDWLCLNLAGNELPLKFSGGTSLNSDRGEWAVSVVSTARE 146

Query: 2055 DWCPSMDSSLEIKDETTE--ICVKVKGQRDVD-----ALESCQPFQADWIHQYVXXXXXX 1897
            DW P +DSS  ++ E  E  + V+ K + D +      L+  QP QADWI QYV      
Sbjct: 147  DWVPYVDSSRRVEGEEEEQRVLVRTKARWDEEDGDGNVLDFRQPSQADWIRQYVEQ---- 202

Query: 1896 XXXXXXXXEIDKGSMEQVAEPRSDP-----DSIIKEYQNARLEAINAKQRGDRKGQEQAG 1732
                       +    +  E  SDP     D I KEY   RLEA  AK++GD+K QEQAG
Sbjct: 203  ----------QEEEESKTWEDDSDPQPRTYDVIAKEYHAVRLEATKAKEKGDKKSQEQAG 252

Query: 1731 QIIRKLKQEMSALGLSDELLLSVNESTYNH---ASDETCDSMPYKYPHNDTLCKVEGG-- 1567
              IRKLKQEMSALGLS +LL    E  + H   + D    S P ++    T   VEG   
Sbjct: 253  HAIRKLKQEMSALGLSLDLL----EQDFGHQHVSEDMFSTSTPCEHLEAITSLDVEGDST 308

Query: 1566 -MESKVDQSVTESSSKE--LSEDIPSSILSNDSIAQEEESGDVELGNFLFEDXXXSEVLP 1396
             +ES VD++  ESSS        +PSS+     I  EE S DVE+G+F  +D   ++ LP
Sbjct: 309  IVESIVDENDLESSSSIGFPLNPVPSSVPLEGEIVSEE-SEDVEIGDFFIDDASSNDALP 367

Query: 1395 PEVVKLQKKESISELSFGKNLEKLEGIWKKGDPQKIPKAILHQLCQKLGWEAPKYSKLLG 1216
            P +++LQK+E + EL   KNLEKLEGIWKKGDPQKIPKA+LHQLCQK GWEAPK++K+L 
Sbjct: 368  PGILELQKREKMRELCSEKNLEKLEGIWKKGDPQKIPKAVLHQLCQKSGWEAPKFNKVLE 427

Query: 1215 KGHGPSYTVSVLRKASGRGKSRKAGGLV 1132
            +  G SY VS+LRKASGRGKSRKAGGL+
Sbjct: 428  RELGFSYAVSILRKASGRGKSRKAGGLI 455


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1509

 Score =  461 bits (1185), Expect(2) = 0.0
 Identities = 233/355 (65%), Positives = 281/355 (79%)
 Frame = -3

Query: 1066 DAQNTVAAFALFRLFPDLPIHLPVIEPYSSLVLQWEEGESSANVEDNEADRRAGFVNSLL 887
            DAQN +AAFAL +LFPDLP+HL V +PY SL+LQW+EGESS+ VE+   DRRAGFV+ LL
Sbjct: 478  DAQNRIAAFALHQLFPDLPVHLIVSDPYDSLILQWKEGESSSKVENTVDDRRAGFVDWLL 537

Query: 886  NVDVMDPIASADLVNSPLQEICQKSHEGNESSAAGSTDLKVKSVSCYHKEVESSYLKRKQ 707
            N D      + +   + L E  Q S      + + +  + V     Y  +VE+SYL+++Q
Sbjct: 538  NADES---TATNHATNRLSETAQNSQVEETKNLSDAVAVPVTQGENYTTDVENSYLRQEQ 594

Query: 706  ENKNKMERYKDMLKSRGTLPISELKGDILRLLKENNVLVVCGETGCGKTTQVPQFILDDM 527
            E K  + +Y+++LK+RG LPI+ LK +IL++LKENN LVVCGETG GKTTQVPQFILDDM
Sbjct: 595  EKKKNVLKYREILKTRGALPIAGLKNEILQMLKENNCLVVCGETGSGKTTQVPQFILDDM 654

Query: 526  IEAGHGGHCNIICTQPRRIAAISVAERVADERCESSPGSNDSLVGYQVRLDSARNERTKL 347
            IE+G GG CNIICTQPRRIAAISVAERVA ER E  PGS  SLVGYQVRLDSARNERTKL
Sbjct: 655  IESGRGGQCNIICTQPRRIAAISVAERVAYERYEPPPGSGGSLVGYQVRLDSARNERTKL 714

Query: 346  LFCTTGILLRKFAGDKNMADVTHVIVDEVHERSLLGDFLLIVLKKLIEKQSADSTHKLKV 167
            LFCTTGILLR+ AGD+N++ +THVIVDEVHERSLLGDFLLIVLK L+EKQS   T KLKV
Sbjct: 715  LFCTTGILLRRLAGDRNLSGITHVIVDEVHERSLLGDFLLIVLKSLLEKQSDQGTPKLKV 774

Query: 166  VLMSATVDSQQFSRYFGHCPVITAKGRTHPVSTFFLEDIYENFNYRLPSDSPASI 2
            +LMSATVDS  FS YFGHCPV++A+GRTHPV+T+FLEDIYE+ +Y L SDSPA++
Sbjct: 775  ILMSATVDSTLFSNYFGHCPVLSAQGRTHPVTTYFLEDIYESIDYHLASDSPAAL 829



 Score =  372 bits (956), Expect(2) = 0.0
 Identities = 216/447 (48%), Positives = 286/447 (63%), Gaps = 22/447 (4%)
 Frame = -1

Query: 2406 GPKLQISAXXXXXXXXXXXNSGHSNPFPDPTPADDSLSKAQKAKKLRSIYEKLSCEGFSD 2227
            GP+LQISA           NS  S   P P P  ++LSKAQKAK+L+++YEKLSCEGFS+
Sbjct: 24   GPRLQISAENENRLRRLLLNSNRSTQ-PTP-PVQENLSKAQKAKRLKNVYEKLSCEGFSN 81

Query: 2226 EHIERVLSALKENATFEAALDWLCLNLAGNELPLKFAGGSSLHTNEGSVGILSIAQDDWC 2047
            + IE  L++LK+NATFE+ALDWLC NL GNELP+KF+ G+SL+ +EGSV ++S A++D  
Sbjct: 82   DQIELALTSLKDNATFESALDWLCFNLPGNELPVKFSSGTSLYASEGSVSVVSTAREDRT 141

Query: 2046 PSMDSSLEIKDETTEIC-VKVKGQRDVDALESC---QPF-QADWIHQYVXXXXXXXXXXX 1882
            P+++++   +D   +   V++KG+RD D        QP  QADWI QY+           
Sbjct: 142  PTVNAANTEEDVQVQAAFVRIKGRRDDDDDNDTSLRQPSSQADWIRQYMEQQEEEESETW 201

Query: 1881 XXXEIDKGSMEQVAEPRSDPDSIIKEYQNARLEAINAKQRGDRKGQEQAGQIIRKLKQEM 1702
                +D    ++V  PRS  D+I KEY  ARLEA+ AK++GD++ QEQ+G IIRKLKQE+
Sbjct: 202  EDYAVDGSFTDKVPVPRSY-DAIAKEYYAARLEAVKAKEKGDKRSQEQSGHIIRKLKQEL 260

Query: 1701 SALGLSDELLLSVNESTYNHASDETCDSMPYK-YPHNDTLCKVEGGMESKVDQSVTESSS 1525
            S+LGLSD++L    E  + H S    + +     PH   L K     ES +   V    S
Sbjct: 261  SSLGLSDDVL--AQEFVHEHTSAFVPEGISTSSMPHEQLLAKTSSDAESNL---VFVLPS 315

Query: 1524 KELSED----------------IPSSILSNDSIAQEEESGDVELGNFLFEDXXXSEVLPP 1393
            +EL  D                 PSS+     I  E+E+ D+ELG F  ED   +E LPP
Sbjct: 316  EELPADPNDMESPSYMEFPVELAPSSVPVQGKIDLEDETADMELGGFFMEDATSNEALPP 375

Query: 1392 EVVKLQKKESISELSFGKNLEKLEGIWKKGDPQKIPKAILHQLCQKLGWEAPKYSKLLGK 1213
            EV++LQKKE + +LS  KNLEKL+GIWKKGDP+KIPKA+LHQLCQK GWEAPK+ K+  +
Sbjct: 376  EVLELQKKEKMKKLSSEKNLEKLDGIWKKGDPKKIPKAVLHQLCQKSGWEAPKFKKVHER 435

Query: 1212 GHGPSYTVSVLRKASGRGKSRKAGGLV 1132
              G SY+VS+LRKASGRGKSRKAGGL+
Sbjct: 436  RKGFSYSVSILRKASGRGKSRKAGGLI 462


>ref|XP_002888226.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297334067|gb|EFH64485.1| helicase domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1458

 Score =  451 bits (1160), Expect(2) = 0.0
 Identities = 231/356 (64%), Positives = 278/356 (78%), Gaps = 1/356 (0%)
 Frame = -3

Query: 1066 DAQNTVAAFALFRLFPDLPIHLPVIEPYSSLVLQWEEGESSANVEDNEADRRAGFVNSLL 887
            DAQN VAAFAL +LF DLP+H  + EPY+SLVL W++ E    ++  E DRRA FV+ LL
Sbjct: 478  DAQNKVAAFALHKLFSDLPVHFAITEPYASLVLNWKQEELLCTIQSTEEDRRANFVDKLL 537

Query: 886  NVDVMDPIASADLVNSPLQEICQKSHEGNESSAAGSTDLKVKSVSCYHKEVESSYLKRKQ 707
              D     AS+  +++ L  +     E ++     S     K     + E E   L+RKQ
Sbjct: 538  EEDNFSLTASSSSIDNALPLVDSYVKEKDDLGVVKSNHRARKDS---YIEAECLSLQRKQ 594

Query: 706  ENKNKMERYKDMLKSRGTLPISELKGDILRLLKENNVLVVCGETGCGKTTQVPQFILDDM 527
            ENK + ++YKDMLK+R  LPISE+K  IL+ LKE +VLVVCGETG GKTTQVPQFILDDM
Sbjct: 595  ENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDM 654

Query: 526  IEAGHGGHCNIICTQPRRIAAISVAERVADERCESSPGSNDSLVGYQVRLDSARNERTKL 347
            I++GHGG+CNIICTQPRRIAAISVA+RVADERCESSPGS+DSLVGYQVRL+SAR+++T+L
Sbjct: 655  IDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGSDDSLVGYQVRLESARSDKTRL 714

Query: 346  LFCTTGILLRKFAGDKNMADVTHVIVDEVHERSLLGDFLLIVLKKLIEKQSADST-HKLK 170
            LFCTTGILLRK AGDK + DVTH+IVDEVHERSLLGDFLLI+LK LIEKQS D+T  KLK
Sbjct: 715  LFCTTGILLRKLAGDKTLNDVTHIIVDEVHERSLLGDFLLIILKTLIEKQSCDNTSRKLK 774

Query: 169  VVLMSATVDSQQFSRYFGHCPVITAKGRTHPVSTFFLEDIYENFNYRLPSDSPASI 2
            V+LMSATVD+  FSRYFGHCPVITA+GRTHPV+T FLE+IYE+ NY L  DSPA++
Sbjct: 775  VILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAAL 830



 Score =  355 bits (911), Expect(2) = 0.0
 Identities = 214/446 (47%), Positives = 282/446 (63%), Gaps = 21/446 (4%)
 Frame = -1

Query: 2406 GPKLQISAXXXXXXXXXXXNSGHSNPFPDPTPADDSLSKAQKAKKLRSIYEKLSCEGFSD 2227
            GPKLQISA           NSG   P   P P  +SLSKAQK KKL ++YEKLSCEGF D
Sbjct: 31   GPKLQISAENEDRLRRLLLNSGRIGPSV-PAPISNSLSKAQKTKKLNNVYEKLSCEGFVD 89

Query: 2226 EHIERVLSALKENATFEAALDWLCLNLAGNELPLKFAGGSS-LHTNEGSVGILSIAQDDW 2050
            + IE  LS+L++ ATFEAALDWLCLNL  +ELP+KF+ G+S   T  G+VG++SI++DDW
Sbjct: 90   DQIELALSSLRDGATFEAALDWLCLNLPSHELPVKFSTGASRFPTTGGTVGVISISRDDW 149

Query: 2049 CPSMDSSLEIKDETTEICVKVKGQRDV-DALESCQPFQADWIHQYVXXXXXXXXXXXXXX 1873
              S DSS+++++E   + V+VKG++D  D L S +  QADWI QY+              
Sbjct: 150  NESADSSVQVEEEEPAVFVRVKGKQDEEDTLNSGKSSQADWIRQYMMRQEEEELECWEDE 209

Query: 1872 E--IDKGSMEQVAEPRSDPDSIIKEYQNARLEAINAKQRGDRKGQEQAGQIIRKLKQEMS 1699
               ID G  ++V+ PR   D I KEY +AR +AI AK++ D++GQEQAG  IRKLKQE+S
Sbjct: 210  VDGIDPG--KKVSGPRPF-DVIAKEYYSARSDAIKAKEKRDKRGQEQAGLAIRKLKQEIS 266

Query: 1698 ALGLSDELLLSVNESTYNHASDETCDSMPYKYPHNDTLCKVEGGMESKVDQ---SVTESS 1528
             LGLS+ +L S  E    HA +   +         ++ C +   +   VD    SV +  
Sbjct: 267  DLGLSEAMLES--EFQREHAFESATEQ--------ESTCPISNNLHESVDADDVSVQQLD 316

Query: 1527 SKEL---------SEDI-----PSSILSNDSIAQEEESGDVELGNFLFEDXXXSEVLPPE 1390
            +  L         SE+I     PSS    D +A +E+S DVELG+  FE+   SE+ P E
Sbjct: 317  NLTLDANPAGSCESEEIQTKALPSSSSGQDLVASDEDSEDVELGDTFFEEIPPSEISPHE 376

Query: 1389 VVKLQKKESISELSFGKNLEKLEGIWKKGDPQKIPKAILHQLCQKLGWEAPKYSKLLGKG 1210
            +++LQK+E + EL   KNL KL+GIWKKGD QKIPKA LHQLCQ+ GWEAPK++K+ G+ 
Sbjct: 377  LLELQKEEKMRELRSEKNLGKLDGIWKKGDAQKIPKAFLHQLCQRSGWEAPKFNKVTGEE 436

Query: 1209 HGPSYTVSVLRKASGRGKSRKAGGLV 1132
               SY VS+LRKASGRGK+R+AGGLV
Sbjct: 437  RNFSYAVSILRKASGRGKNRQAGGLV 462


>ref|NP_176103.2| helicase associated domain-containing protein [Arabidopsis thaliana]
            gi|332195372|gb|AEE33493.1| helicase associated
            domain-containing protein [Arabidopsis thaliana]
          Length = 1459

 Score =  439 bits (1128), Expect(2) = 0.0
 Identities = 228/357 (63%), Positives = 277/357 (77%), Gaps = 2/357 (0%)
 Frame = -3

Query: 1066 DAQNTVAAFALFRLFPDLPIHLPVIEPYSSLVLQWEEGES-SANVEDNEADRRAGFVNSL 890
            DAQN VAAFAL +LF DLP+H  + EPY+SLVL W++ E     ++  E DRRA FV+ L
Sbjct: 478  DAQNKVAAFALHKLFSDLPVHFAITEPYASLVLIWKQEELLCTTIQSTEEDRRANFVDKL 537

Query: 889  LNVDVMDPIASADLVNSPLQEICQKSHEGNESSAAGSTDLKVKSVSCYHKEVESSYLKRK 710
            L  D      S+    + L  +     + ++     S + + K  S  + E E   L+RK
Sbjct: 538  LEEDSFSLTTSSSSFENSLPLVDSYVKDKDDLGVVKSNN-RAKRDS--YIEAECLSLQRK 594

Query: 709  QENKNKMERYKDMLKSRGTLPISELKGDILRLLKENNVLVVCGETGCGKTTQVPQFILDD 530
            QENK + ++YKDMLK+R  LPISE+K  IL+ LKE +VLVVCGETG GKTTQVPQFILDD
Sbjct: 595  QENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDD 654

Query: 529  MIEAGHGGHCNIICTQPRRIAAISVAERVADERCESSPGSNDSLVGYQVRLDSARNERTK 350
            MI++GHGG+CNIICTQPRRIAAISVA+RVADERCESSPG +DSLVGYQVRL+SAR+++T+
Sbjct: 655  MIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTR 714

Query: 349  LLFCTTGILLRKFAGDKNMADVTHVIVDEVHERSLLGDFLLIVLKKLIEKQSADST-HKL 173
            LLFCTTGILLRK AGD+ + DVTH+IVDEVHERSLLGDFLLI+LK LIEKQS D+T  KL
Sbjct: 715  LLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKL 774

Query: 172  KVVLMSATVDSQQFSRYFGHCPVITAKGRTHPVSTFFLEDIYENFNYRLPSDSPASI 2
            KV+LMSATVD+  FSRYFGHCPVITA+GRTHPV+T FLE+IYE+ NY L  DSPA++
Sbjct: 775  KVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAAL 831



 Score =  360 bits (924), Expect(2) = 0.0
 Identities = 207/434 (47%), Positives = 281/434 (64%), Gaps = 9/434 (2%)
 Frame = -1

Query: 2406 GPKLQISAXXXXXXXXXXXNSGHSNPFPDPTPADDSLSKAQKAKKLRSIYEKLSCEGFSD 2227
            GPKLQISA           NSG S P   P P  +SLSKAQK KKL ++YEKLSCEGF D
Sbjct: 31   GPKLQISAENEDRLRRLLLNSGRSGP-SIPAPISNSLSKAQKTKKLNNVYEKLSCEGFVD 89

Query: 2226 EHIERVLSALKENATFEAALDWLCLNLAGNELPLKFAGGSS-LHTNEGSVGILSIAQDDW 2050
            + IE  LS+L++ ATFEAALDWLCLNL  +ELP+KF+ G+S   +  GSVG++S ++DDW
Sbjct: 90   DQIELALSSLRDGATFEAALDWLCLNLPSHELPVKFSTGASRFPSTGGSVGVISTSRDDW 149

Query: 2049 CPSMDSSLEIKDETTEICVKVKGQRDV-DALESCQPFQADWIHQYVXXXXXXXXXXXXXX 1873
              S DSS+ +++E   + V+VKG++D  D L S +  QADWI QY+              
Sbjct: 150  NDSTDSSVRVEEEEPAVFVRVKGKQDEEDTLSSDKSSQADWIRQYMMRQEEEELECWEDE 209

Query: 1872 EIDKGSMEQVAEPRSDPDSIIKEYQNARLEAINAKQRGDRKGQEQAGQIIRKLKQEMSAL 1693
                    +V+ PR   D I KEY +AR +AI AK++ D++GQEQAG  IRKLKQE+S L
Sbjct: 210  VDGIDPRNKVSGPRPF-DVIAKEYYSARSDAIKAKEKRDKRGQEQAGLAIRKLKQEISDL 268

Query: 1692 GLSDELLLSV--NESTYNHASDE--TC---DSMPYKYPHNDTLCKVEGGMESKVDQSVTE 1534
            GLS+ +L S    E  +  A+++  TC   D++      +D   ++   +    + + + 
Sbjct: 269  GLSEAMLESEFQREHAFESATEQESTCPISDNLHESVDADDVSVQMLDNLTLNTNPAESY 328

Query: 1533 SSSKELSEDIPSSILSNDSIAQEEESGDVELGNFLFEDXXXSEVLPPEVVKLQKKESISE 1354
             S +  ++ +PSS    D +A +E+S DVELG+  FE+   SE+ P E+++LQK+E + E
Sbjct: 329  ESEEIQTKALPSSSSGQDFVASDEDSEDVELGDTFFEEIPPSEISPHELLELQKEEKMRE 388

Query: 1353 LSFGKNLEKLEGIWKKGDPQKIPKAILHQLCQKLGWEAPKYSKLLGKGHGPSYTVSVLRK 1174
            L   KNL KL+GIWKKG+ QKIPKA LHQLCQ+ GWEAPK++K  G+G   SYTVS+LRK
Sbjct: 389  LRSEKNLGKLDGIWKKGEAQKIPKAFLHQLCQRSGWEAPKFNKETGEGRNFSYTVSILRK 448

Query: 1173 ASGRGKSRKAGGLV 1132
            ASGRGK+R+AGGLV
Sbjct: 449  ASGRGKNRQAGGLV 462