BLASTX nr result

ID: Panax21_contig00013904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00013904
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26003.3| unnamed protein product [Vitis vinifera]               95   3e-21
ref|XP_003632418.1| PREDICTED: squamosa promoter-binding-like pr...    92   1e-19
ref|XP_002274934.1| PREDICTED: squamosa promoter-binding-like pr...    96   8e-18
ref|XP_002320264.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
emb|CBI37021.3| unnamed protein product [Vitis vinifera]               81   6e-17

>emb|CBI26003.3| unnamed protein product [Vitis vinifera]
          Length = 980

 Score = 94.7 bits (234), Expect(3) = 3e-21
 Identities = 55/141 (39%), Positives = 72/141 (51%)
 Frame = +1

Query: 250 SRPTGQCVTIPASGMTQKKVFVNGGHGSILRSPPVTQANVLSPTKHSIPTKANDLDPTVG 429
           SRP G C+      M +K+VF +     +L++   TQ     PT   +P   N    T G
Sbjct: 288 SRPIGPCLMATVPEMAEKRVFTDDAQVGMLQNLSGTQPTNRFPTGDGVPAMENMQGTTHG 347

Query: 430 RKKLHNIDLNNVYDDSEECMENLESSDAPVNVATGSPGCPLWIHEDSHKSSSPQAXXXXX 609
           R KL+N DLNNVY+DS++C+EN E S  P N  T      L + +DS+KSS PQ      
Sbjct: 348 RIKLNNFDLNNVYNDSQDCIENPERSYGPANPGTRPLDRALLVQQDSYKSSPPQTSANSD 407

Query: 610 XXXXXXXXXXNVEAQSRTDRI 672
                     + EAQSRTDRI
Sbjct: 408 STSARSLSTSSGEAQSRTDRI 428



 Score = 32.3 bits (72), Expect(3) = 3e-21
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +2

Query: 140 NSFDQTKDQDLLSHLL 187
           NS DQTKDQDLLSH+L
Sbjct: 233 NSSDQTKDQDLLSHIL 248



 Score = 20.4 bits (41), Expect(3) = 3e-21
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   SLLRILSNIH 32
           S+LRILSN+H
Sbjct: 222 SVLRILSNMH 231


>ref|XP_003632418.1| PREDICTED: squamosa promoter-binding-like protein 12-like isoform 2
           [Vitis vinifera]
          Length = 963

 Score = 92.0 bits (227), Expect(3) = 1e-19
 Identities = 51/129 (39%), Positives = 70/129 (54%)
 Frame = +1

Query: 286 SGMTQKKVFVNGGHGSILRSPPVTQANVLSPTKHSIPTKANDLDPTVGRKKLHNIDLNNV 465
           SG+ Q+   +N G        P     ++ P K S+P  +   D T G+ KL+N DLN++
Sbjct: 287 SGLLQESQLLNDGISVGNTEVP----GIMFPIKDSLPVYSEVRDSTAGQIKLNNFDLNDI 342

Query: 466 YDDSEECMENLESSDAPVNVATGSPGCPLWIHEDSHKSSSPQAXXXXXXXXXXXXXXXNV 645
           Y DS++ ME+LE S  P N+ TGS  CP W+ +DSH+SS PQ                + 
Sbjct: 343 YIDSDDGMEDLERSPVPENLGTGSLECPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSSG 402

Query: 646 EAQSRTDRI 672
           EAQSRTDRI
Sbjct: 403 EAQSRTDRI 411



 Score = 28.5 bits (62), Expect(3) = 1e-19
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +2

Query: 131 VTPNSFDQTKDQDLLSHLL 187
           +  N   QTKDQDLLSHLL
Sbjct: 253 ILSNMHYQTKDQDLLSHLL 271



 Score = 21.6 bits (44), Expect(3) = 1e-19
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   SLLRILSNIH 32
           SLLRILSN+H
Sbjct: 249 SLLRILSNMH 258


>ref|XP_002274934.1| PREDICTED: squamosa promoter-binding-like protein 1-like [Vitis
           vinifera]
          Length = 1029

 Score = 95.5 bits (236), Expect = 8e-18
 Identities = 56/144 (38%), Positives = 73/144 (50%)
 Frame = +1

Query: 241 QDPSRPTGQCVTIPASGMTQKKVFVNGGHGSILRSPPVTQANVLSPTKHSIPTKANDLDP 420
           Q  SRP G C+      M +K+VF +     +L++   TQ     PT   +P   N    
Sbjct: 334 QASSRPIGPCLMATVPEMAEKRVFTDDAQVGMLQNLSGTQPTNRFPTGDGVPAMENMQGT 393

Query: 421 TVGRKKLHNIDLNNVYDDSEECMENLESSDAPVNVATGSPGCPLWIHEDSHKSSSPQAXX 600
           T GR KL+N DLNNVY+DS++C+EN E S  P N  T      L + +DS+KSS PQ   
Sbjct: 394 THGRIKLNNFDLNNVYNDSQDCIENPERSYGPANPGTRPLDRALLVQQDSYKSSPPQTSA 453

Query: 601 XXXXXXXXXXXXXNVEAQSRTDRI 672
                        + EAQSRTDRI
Sbjct: 454 NSDSTSARSLSTSSGEAQSRTDRI 477


>ref|XP_002320264.1| predicted protein [Populus trichocarpa] gi|222861037|gb|EEE98579.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
 Frame = +1

Query: 241 QDPSRPTGQCVTIPASGMTQKKVFVNGGHGSILRSPPVTQANVLSPT-KHSIPTKANDLD 417
           + PS+P  Q +T+P SGM Q+   ++  +G+ +++     A+ L P+  ++  T +   +
Sbjct: 62  EGPSKPLKQHLTVPMSGMPQQVKHLHDANGANIQT-----ASSLKPSIPNNFATYSEVRE 116

Query: 418 PTVGRKKLHNIDLNNVYDDSEECMENLESSDAPVNVATGSPGCPLWIHEDSHKSSSPQAX 597
            T G+ K++N DLN++Y DS++ +E++E S APVN  T S  CP W+ +DS +SS PQ  
Sbjct: 117 STAGQVKMNNFDLNDIYIDSDDGIEDIERSPAPVNAMTSSLDCPSWVQQDSRQSSPPQTS 176

Query: 598 XXXXXXXXXXXXXXNVEAQSRTDRI 672
                         + EAQSRTDRI
Sbjct: 177 GNSDSASAQSPSSSSGEAQSRTDRI 201


>emb|CBI37021.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score = 81.3 bits (199), Expect(3) = 6e-17
 Identities = 48/129 (37%), Positives = 70/129 (54%)
 Frame = +1

Query: 286 SGMTQKKVFVNGGHGSILRSPPVTQANVLSPTKHSIPTKANDLDPTVGRKKLHNIDLNNV 465
           SG+ Q+   +N G    + +  V  A +L    H+   +  ++  T  + KL+N DLN++
Sbjct: 271 SGLLQESQLLNDGIS--VGNTEVVSA-LLPNGVHADEARVGNMQMTSWQIKLNNFDLNDI 327

Query: 466 YDDSEECMENLESSDAPVNVATGSPGCPLWIHEDSHKSSSPQAXXXXXXXXXXXXXXXNV 645
           Y DS++ ME+LE S  P N+ TGS  CP W+ +DSH+SS PQ                + 
Sbjct: 328 YIDSDDGMEDLERSPVPENLGTGSLECPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSSG 387

Query: 646 EAQSRTDRI 672
           EAQSRTDRI
Sbjct: 388 EAQSRTDRI 396



 Score = 30.0 bits (66), Expect(3) = 6e-17
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 149 DQTKDQDLLSHLL 187
           DQTKDQDLLSHLL
Sbjct: 243 DQTKDQDLLSHLL 255



 Score = 21.6 bits (44), Expect(3) = 6e-17
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   SLLRILSNIH 32
           SLLRILSN+H
Sbjct: 228 SLLRILSNMH 237


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